CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX84957	Canola	cytosol	92.24	55.58
Zm00001d048784_P001	Maize	cytosol	60.34	45.45
CDY01855	Canola	cytosol, plastid	77.16	40.59
CDY56212	Canola	plastid	77.16	40.59
VIT_01s0137g00460.t01	Wine grape	nucleus	71.12	37.33
KRH43098	Soybean	endoplasmic reticulum, golgi	70.26	35.43
KRH59243	Soybean	endoplasmic reticulum, golgi	69.83	35.22
KRG97516	Soybean	golgi, plasma membrane	69.4	35.08
KRH31355	Soybean	golgi, plasma membrane	69.83	34.99
GSMUA_Achr8P01300_001	Banana	nucleus	65.09	34.79
CDX85597	Canola	cytosol, plastid	67.24	34.59
TraesCS3A01G414400.2	Wheat	cytosol	64.66	34.4
CDX91062	Canola	cytosol, plastid	66.81	34.29
Os01t0908700-01	Rice	plasma membrane, plastid	65.52	34.08
CDX67997	Canola	cytosol	55.17	33.86
CDX79314	Canola	cytosol, plastid	55.17	33.77
CDX91935	Canola	cytosol	66.38	33.7
CDX84471	Canola	cytosol, mitochondrion	52.59	33.61
CDY09854	Canola	nucleus, plastid	67.24	33.48
CDX69581	Canola	nucleus, plastid	67.24	33.48
EES04073	Sorghum	nucleus	65.95	33.33
CDY43775	Canola	cytosol, mitochondrion	52.59	33.24
CDY39835	Canola	cytosol	52.59	33.24
CDY31343	Canola	cytosol	52.59	33.24
GSMUA_Achr6P06710_001	Banana	nucleus	65.52	33.04
CDX74310	Canola	cytosol	65.09	32.97
CDX70564	Canola	cytosol, plastid	66.81	32.91
CDX85680	Canola	mitochondrion, plastid	20.69	32.65
CDY49066	Canola	cytosol	64.66	32.61
CDX87387	Canola	plastid	56.47	32.59
TraesCS3B01G449200.1	Wheat	cytosol	65.52	32.55
CDX78576	Canola	cytosol, plastid	65.95	32.48
GSMUA_Achr9P29460_001	Banana	nucleus	65.52	32.48
TraesCS3D01G408900.1	Wheat	cytosol	65.09	32.4
CDY37509	Canola	cytosol	64.22	32.39
CDX88533	Canola	plastid	56.03	32.26
Zm00001d042437_P005	Maize	cytosol	64.66	31.78
Zm00001d012101_P002	Maize	mitochondrion	65.52	29.92
OQU79014	Sorghum	plastid	63.36	27.79
TraesCS5D01G122000.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	64.22	27.75
HORVU5Hr1G039100.3	Barley	endoplasmic reticulum, extracellular, golgi	63.79	27.46
Os12t0288400-01	Rice	endoplasmic reticulum, extracellular, vacuole	64.22	27.29
HORVU3Hr1G092250.6	Barley	plastid	64.66	27.03
Zm00001d041073_P001	Maize	endoplasmic reticulum, golgi, vacuole	62.93	26.99
TraesCS5A01G103800.2	Wheat	endoplasmic reticulum, extracellular, golgi	63.79	26.48
CDY52873	Canola	plastid	28.88	21.9
CDX72278	Canola	plastid	30.17	18.87
CDX98983	Canola	cytosol, plastid	17.67	16.73
TraesCS5B01G111900.1	Wheat	cytosol	16.38	15.77
CDY00235	Canola	cytosol	28.02	11.21
CDX81044	Canola	cytosol	27.59	10.9
CDX98984	Canola	cytosol	27.59	10.9
CDX78287	Canola	cytosol	27.59	10.9
CDX70026	Canola	cytosol	27.59	10.87
CDX86951	Canola	cytosol	27.16	10.86
CDY22660	Canola	cytosol	25.86	10.33
CDY06335	Canola	cytosol	25.86	10.29
CDX99619	Canola	cytosol	2.59	8.82
CDY03984	Canola	cytosol	8.19	6.4
CDY27585	Canola	cytosol	2.59	4.62
CDY50776	Canola	cytosol	1.29	4.05
CDY25816	Canola	cytosol	0.43	2.04
CDY49067	Canola	extracellular	0.86	1.33

Protein Annotations

EnsemblPlants:CDY27584	EnsemblPlantsGene:GSBRNA2T00038321001	InterPro:Copine	InterPro:IPR036465	InterPro:vWFA_dom_sf	PANTHER:PTHR10857
PANTHER:PTHR10857:SF28	PFAM:PF07002	ProteinID:CDY27584	ProteinID:CDY27584.1	SUPFAM:SSF53300	UniParc:UPI0004EEE3AE
UniProt:A0A078GQW6	MapMan:19.2.2.1.5.3.2	MapMan:19.2.2.1.6.2	:	:	:

Description

BnaA09g28230DBnaA09g28230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GQW6]

Coordinates

chrLK032207:+:150559..152039

Molecular Weight (calculated)

25454.7 Da

IEP (calculated)

5.049

GRAVY (calculated)

-0.297

Length

232 amino acids

Sequence
(BLAST)

001: MGSSSSKSRI NSTPQHPSGF QQKNHDKKYS LIGDNYRSTD EVTAALLQAG LESSNLIVGI DVTKSNEWTG ARSFDGKSLH HIGPAPNPYE QAISIIGKTL
101: SSFDEDNLIP CYGFGDATTH DQDVFSFFPD DAFCNGFEQV LARYREIVPQ LCLAGPTSFA PIIERAMTIV EESGGQYHVL LIIADGQVTT QHGGLSSQER
201: KTIDAIVRAK SVSIIDSFGW CWRWSLGYNE TV

Best Arabidopsis Sequence Match ( AT1G67800.1 )
(BLAST)

001: MGGSSSKESP RGGGSGRRYE RSVSGSSSYS SAWDQSSYYQ TPNHPSASPV SSYNSGRQTP KNLERKYSRI ADNYRSIDEV TAALSHAGLE SSNLIVGIDV
101: TKSNEWTGAR SFGRKSLHFI GTTPNPYQQA ISIIGKTLSV FDEDNLIPCY GFGDATTHDQ DVFSFNPNDT YCNGFEEVLM CYREIVPQLR LSGPTSFAPI
201: IERAMTIVEE SGGQYHVLLI IADGQVTRSV DTDNGGFSPQ EQQTIDAIVR ASEYPLSIVL VGVGDGPWDT MRQFDDNIPA RAFDNFQFVN FTDIMSKNID
301: PARKEAEFAL SALMEIPSQY KATLELGLLG QRTGHCPDRI ALPPPTYATQ SMRNSPRTSR STSFQNKPYD NGVSSTPPST THNESQQQFC PVCLVSAKNM
401: AFNCGHQTCA GCGEDLHVCP ICRSSISVRI KLY

Arabidopsis Description

Copine (Calcium-dependent phospholipid-binding protein) family [Source:UniProtKB/TrEMBL;Acc:F4HTR6]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.