Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 3
- nucleus 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os09t0565300-01 | Rice | cytosol | 12.95 | 18.75 |
| Solyc03g118200.2.1 | Tomato | cytosol | 51.8 | 12.41 |
| Solyc06g068840.2.1 | Tomato | cytosol | 45.32 | 10.92 |
| Solyc03g111870.2.1 | Tomato | nucleus | 27.34 | 8.7 |
| Solyc09g065870.2.1 | Tomato | nucleus | 23.74 | 7.86 |
| Solyc05g053870.2.1 | Tomato | plastid | 25.18 | 7.76 |
| Solyc02g093520.2.1 | Tomato | nucleus | 26.62 | 7.52 |
| Bra007134.1-P | Field mustard | mitochondrion | 19.42 | 7.44 |
| Solyc10g045500.1.1 | Tomato | cytosol | 2.88 | 3.12 |
| PGSC0003DMT400049766 | Potato | extracellular | 1.44 | 1.69 |
| Os09t0565200-02 | Rice | extracellular | 1.44 | 0.62 |
| Os09t0565350-00 | Rice | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Solyc10g045520.1.1 | EnsemblPlantsGene:Solyc10g045520.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005544 | GO:GO:0008150 |
| GO:GO:0008219 | GO:GO:0008289 | GO:GO:0009987 | GO:GO:0060548 | InterPro:BONZAI | InterPro:Copine |
| PANTHER:PTHR10857 | PANTHER:PTHR10857:SF108 | PFAM:PF07002 | UniParc:UPI0002769A24 | UniProt:K4CZR8 | MapMan:35.1 |
Description
No Description!
Coordinates
chr10:-:34155770..34157013
Molecular Weight (calculated)
15883.1 Da
IEP (calculated)
5.049
GRAVY (calculated)
0.093
Length
139 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLKGQLFVE GYAEKQFYSF LDYISNGFEL SFMMHLNMQC LASNGDPRSP DSLHYIDPSG RLNAYQRAIM EVGDVIQFYD SDKCFPTCGF GGRAYGGTVS
101: YCFNLSWKHG AVEVFGNQLC YLEMFICYIS RVLFICTWA
101: YCFNLSWKHG AVEVFGNQLC YLEMFICYIS RVLFICTWA
001: MGGCLSGDVK GGKQAIGGVQ QRPTSSTIAN NAAHNDAVDF FFRSRGQYPL FSQIELTLSA SNLLDCDITS KSDPMAVMYL RKKDGRLEEI GRTEVILNNL
101: NPKWIEKITV SFQFEAVQTL VFHVYDVDTR YHNVPVKTLK LKDQDFLGEG TCVLSEIMTR QNRTLTLTLT GNVRAGVNRN LGTLSIQAEE TVASKTVAEI
201: NFRCVNLDNK DLFSKSDPFL RISRVVETSA AVPICRTEVV DNNLNPMWRP VCLTMQQFGS KDTPLVIECL DFNTSGNHEL IGKTEKSVAE LERLCLQKEA
301: ANFVYPSLSH GRNKVLKGQL IVDRYVEKVQ YSFLDYISSG FELNFMVAVD FTASNGDPRT PSSLHYIDPS GRLNSYQQAI MEVGEVIQFY DSDKRFPAWG
401: FGGRTSDGSV SHAFNLNGAS YGDEVVGVEG IMVAYASALR NVSLAGPTLF SNVVDKAAHT ASQSLSQNSP KYFVLLIITD GVLTDMAGTV DALVRASDLP
501: LSVLIVGVGN TDFKQMEMLD ADNGRRLESS TGRIATRDIV QFVPMKDIHS GLVSVVQALL EELPGQFLTY VRSRKINPIG APAI
101: NPKWIEKITV SFQFEAVQTL VFHVYDVDTR YHNVPVKTLK LKDQDFLGEG TCVLSEIMTR QNRTLTLTLT GNVRAGVNRN LGTLSIQAEE TVASKTVAEI
201: NFRCVNLDNK DLFSKSDPFL RISRVVETSA AVPICRTEVV DNNLNPMWRP VCLTMQQFGS KDTPLVIECL DFNTSGNHEL IGKTEKSVAE LERLCLQKEA
301: ANFVYPSLSH GRNKVLKGQL IVDRYVEKVQ YSFLDYISSG FELNFMVAVD FTASNGDPRT PSSLHYIDPS GRLNSYQQAI MEVGEVIQFY DSDKRFPAWG
401: FGGRTSDGSV SHAFNLNGAS YGDEVVGVEG IMVAYASALR NVSLAGPTLF SNVVDKAAHT ASQSLSQNSP KYFVLLIITD GVLTDMAGTV DALVRASDLP
501: LSVLIVGVGN TDFKQMEMLD ADNGRRLESS TGRIATRDIV QFVPMKDIHS GLVSVVQALL EELPGQFLTY VRSRKINPIG APAI
Arabidopsis Description
BON3Protein BONZAI 3 [Source:UniProtKB/Swiss-Prot;Acc:Q5XQC7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.