Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028741.1-P | Field mustard | nucleus | 55.71 | 96.39 |
| CDY14091 | Canola | plastid | 77.58 | 84.91 |
| CDY11354 | Canola | plastid | 49.3 | 81.76 |
| CDX80988 | Canola | plastid | 48.47 | 81.31 |
| AT5G06150.1 | Thale cress | nucleus | 49.58 | 80.0 |
| CDY69551 | Canola | nucleus | 33.57 | 67.89 |
| CDY62475 | Canola | nucleus | 33.15 | 67.81 |
| KRH66720 | Soybean | endoplasmic reticulum, vacuole | 16.3 | 58.79 |
| TraesCSU01G217300.1 | Wheat | cytosol | 16.85 | 56.02 |
| KRG95055 | Soybean | nucleus | 34.12 | 53.85 |
| KRH66715 | Soybean | nucleus | 29.39 | 53.83 |
| VIT_08s0040g00930.t01 | Wine grape | nucleus | 33.7 | 53.42 |
| KRH66713 | Soybean | nucleus | 33.7 | 53.3 |
| GSMUA_Achr4P10090_001 | Banana | nucleus | 31.06 | 52.47 |
| Zm00001d019469_P001 | Maize | extracellular | 10.45 | 52.45 |
| CDX69311 | Canola | nucleus | 30.5 | 52.27 |
| CDX75659 | Canola | nucleus | 30.78 | 51.64 |
| VIT_13s0067g01420.t01 | Wine grape | nucleus | 32.59 | 50.65 |
| KRH66718 | Soybean | plastid | 26.04 | 50.13 |
| Solyc10g078330.1.1 | Tomato | nucleus | 29.39 | 49.88 |
| GSMUA_Achr7P21380_001 | Banana | nucleus | 31.34 | 49.23 |
| PGSC0003DMT400018480 | Potato | nucleus | 29.11 | 49.18 |
| GSMUA_Achr10P... | Banana | nucleus | 30.78 | 48.79 |
| EES03772 | Sorghum | nucleus, plastid | 30.36 | 48.55 |
| GSMUA_Achr8P23970_001 | Banana | nucleus | 29.39 | 48.51 |
| GSMUA_AchrUn_... | Banana | nucleus | 20.06 | 48.32 |
| Solyc10g080950.1.1 | Tomato | nucleus | 31.06 | 48.27 |
| HORVU0Hr1G001680.1 | Barley | nucleus | 21.45 | 48.12 |
| PGSC0003DMT400072211 | Potato | nucleus | 30.92 | 47.84 |
| AT1G34460.5 | Thale cress | cytosol | 33.15 | 47.79 |
| Zm00001d012560_P002 | Maize | nucleus, plastid | 29.39 | 46.99 |
| KXG24389 | Sorghum | nucleus | 16.43 | 46.83 |
| GSMUA_Achr3P24980_001 | Banana | nucleus | 26.18 | 46.77 |
| KRG95056 | Soybean | cytosol | 25.07 | 46.51 |
| HORVU3Hr1G078880.2 | Barley | nucleus | 29.25 | 46.36 |
| TraesCS1D01G309300.1 | Wheat | nucleus, plastid | 27.99 | 46.1 |
| TraesCS3B01G363200.3 | Wheat | nucleus | 29.53 | 45.99 |
| TraesCS3D01G326600.1 | Wheat | nucleus | 29.11 | 45.93 |
| HORVU1Hr1G068080.1 | Barley | plastid | 21.73 | 45.61 |
| TraesCS3A01G333000.2 | Wheat | nucleus | 29.11 | 45.43 |
| TraesCS1B01G320900.1 | Wheat | nucleus, plastid | 27.58 | 45.41 |
| TraesCS1A01G309800.1 | Wheat | nucleus | 27.44 | 45.18 |
| HORVU1Hr1G068010.7 | Barley | mitochondrion, nucleus | 26.32 | 45.0 |
| TraesCS1D01G309400.1 | Wheat | nucleus | 27.02 | 44.39 |
| HORVU0Hr1G026010.1 | Barley | nucleus, plastid | 27.16 | 44.02 |
| HORVU1Hr1G068160.2 | Barley | nucleus, plastid | 27.16 | 44.02 |
| HORVU0Hr1G001690.16 | Barley | nucleus, peroxisome | 26.74 | 43.84 |
| Zm00001d043164_P002 | Maize | nucleus | 29.39 | 43.59 |
| TraesCS1B01G321000.1 | Wheat | nucleus | 26.32 | 43.35 |
| CDY31481 | Canola | nucleus | 13.09 | 43.32 |
| Zm00001d010656_P001 | Maize | nucleus | 26.6 | 42.83 |
| Os01t0281200-01 | Rice | nucleus | 24.65 | 41.84 |
| EES18429 | Sorghum | mitochondrion | 26.46 | 41.3 |
| TraesCS3A01G192100.1 | Wheat | nucleus, plastid | 23.68 | 41.06 |
| TraesCS3D01G195200.1 | Wheat | plastid | 23.54 | 40.92 |
| TraesCS7A01G229300.1 | Wheat | endoplasmic reticulum | 18.11 | 39.51 |
| Os05t0493500-00 | Rice | nucleus | 26.04 | 38.4 |
| CDY29184 | Canola | nucleus | 22.28 | 38.19 |
| CDY26816 | Canola | nucleus | 21.59 | 38.08 |
| CDY07838 | Canola | nucleus | 22.14 | 38.04 |
| CDX85942 | Canola | nucleus | 21.59 | 37.99 |
| CDX72551 | Canola | nucleus | 20.75 | 37.16 |
| CDY30357 | Canola | nucleus | 20.89 | 36.67 |
| EES02793 | Sorghum | nucleus | 23.54 | 36.5 |
| CDY06752 | Canola | nucleus | 14.48 | 36.49 |
| CDY67210 | Canola | nucleus | 20.47 | 36.21 |
| CDX96631 | Canola | nucleus | 20.61 | 36.1 |
| CDX68105 | Canola | nucleus | 19.78 | 35.95 |
| Zm00001d008221_P001 | Maize | nucleus | 23.96 | 35.91 |
| CDY33634 | Canola | nucleus | 20.2 | 35.54 |
| CDX88261 | Canola | nucleus | 21.03 | 35.12 |
| Os02t0627800-00 | Rice | cytosol, mitochondrion, peroxisome | 19.36 | 35.1 |
| CDX87612 | Canola | nucleus | 21.03 | 35.03 |
| CDY29520 | Canola | nucleus | 19.78 | 34.63 |
| HORVU3Hr1G040990.2 | Barley | nucleus, plastid | 23.12 | 33.74 |
| CDY66770 | Canola | nucleus | 16.85 | 33.43 |
| CDY06757 | Canola | nucleus, plastid | 16.85 | 33.33 |
| CDY22369 | Canola | nucleus | 16.3 | 33.33 |
| CDY23653 | Canola | nucleus | 16.43 | 33.05 |
| CDY47596 | Canola | nucleus | 16.43 | 32.51 |
| CDY17091 | Canola | nucleus | 16.16 | 32.4 |
| CDY17039 | Canola | nucleus | 16.3 | 32.23 |
| CDY17037 | Canola | nucleus, plastid | 16.3 | 32.14 |
| CDY47595 | Canola | nucleus, plastid | 16.43 | 31.81 |
| CDY62408 | Canola | nucleus, plasma membrane, plastid | 9.19 | 31.28 |
| Zm00001d020033_P001 | Maize | nucleus | 23.68 | 31.25 |
| CDX88368 | Canola | plastid | 16.16 | 30.53 |
| Zm00001d020996_P001 | Maize | nucleus | 23.12 | 30.51 |
| CDY41784 | Canola | plastid | 13.93 | 29.41 |
| CDX87520 | Canola | nucleus | 15.6 | 29.02 |
| CDY61993 | Canola | nucleus | 14.9 | 28.38 |
| CDX87087 | Canola | plastid | 16.3 | 28.06 |
| CDX92090 | Canola | mitochondrion, nucleus | 13.93 | 28.01 |
| CDY02719 | Canola | plastid | 16.43 | 27.51 |
| CDX85466 | Canola | plastid | 16.16 | 27.49 |
| CDY48212 | Canola | nucleus | 14.35 | 27.32 |
| CDX81722 | Canola | nucleus, plastid | 15.32 | 27.3 |
| CDY53304 | Canola | plastid | 15.46 | 27.14 |
| CDY66415 | Canola | nucleus | 15.74 | 26.04 |
| CDX79389 | Canola | plastid | 15.6 | 25.87 |
| CDY36574 | Canola | mitochondrion, nucleus | 15.6 | 25.69 |
| CDY65994 | Canola | plastid | 15.74 | 25.51 |
| CDX67944 | Canola | plastid | 15.18 | 25.23 |
| CDX96836 | Canola | nucleus, plastid | 15.32 | 25.0 |
| CDY39984 | Canola | plastid | 15.6 | 25.0 |
| CDY25649 | Canola | plastid | 15.04 | 24.71 |
| CDX97090 | Canola | nucleus | 14.76 | 24.31 |
| CDX87305 | Canola | plastid | 15.6 | 24.24 |
| CDY38664 | Canola | nucleus, plastid | 15.32 | 24.18 |
| CDX69768 | Canola | nucleus, plastid | 14.62 | 24.03 |
| CDY33338 | Canola | nucleus | 19.5 | 23.97 |
| CDY37592 | Canola | mitochondrion, plastid | 15.18 | 23.85 |
| CDY35083 | Canola | cytosol, endoplasmic reticulum, nucleus | 19.08 | 22.5 |
| CDX96819 | Canola | nucleus | 19.22 | 21.4 |
| CDX83953 | Canola | nucleus | 18.66 | 20.46 |
| CDY19803 | Canola | golgi, nucleus, plasma membrane, plastid | 15.88 | 11.53 |
Protein Annotations
| Gene3D:1.10.472.10 | Gene3D:1.20.1270.60 | MapMan:13.1.1.1.2 | MapMan:22.5.5.3.5 | GO:A0A078ESP3 | InterPro:AH/BAR_dom_sf |
| EnsemblPlants:CDY04980 | ProteinID:CDY04980 | ProteinID:CDY04980.1 | ncoils:Coil | InterPro:Cyclin-like | InterPro:Cyclin-like_sf |
| InterPro:Cyclin_C-dom | InterPro:Cyclin_N | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0008289 | GO:GO:0035091 | EnsemblPlantsGene:GSBRNA2T00119711001 | InterPro:IPR001683 |
| InterPro:IPR027267 | InterPro:IPR036871 | PFAM:PF00134 | PFAM:PF00787 | PFAM:PF02984 | PFAM:PF09325 |
| ScanProsite:PS00292 | PFscan:PS50195 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF267 | InterPro:PX_dom_sf | InterPro:Phox |
| SMART:SM00312 | SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF103657 | SUPFAM:SSF47954 | SUPFAM:SSF64268 |
| UniParc:UPI0004EE2A82 | InterPro:Vps5_C | SEG:seg | : | : | : |
Description
BnaAnng01620D
Coordinates
chrLK031958:-:911643..915843
Molecular Weight (calculated)
81694.9 Da
IEP (calculated)
8.952
GRAVY (calculated)
-0.379
Length
718 amino acids
Sequence
(BLAST)
(BLAST)
001: MATRTNMPEQ VRADGVKIQN KNGAVKNRRA LGDIGNRNLV SVPLAQGGKP INRPITRSFR AQLLANANGG ENKAPVLAAK KPQQPLVPKK NLVVKKAAVS
101: PPKSKNVTYS SVLSARSKAA CGVTNKPKIL DIDESDKDNH LAAVEYVEDM YSFYKEVEKE SQPKMYMHIQ TEMNEKMRAI LVDWLLEVHV KFELNLETLY
201: LTVNIIDRFL SVKAVPKREL QLVGISALLI ASKYEEIWPP QVNDLVYVTD NAYNSKQILV MEKTILGNLE WYLTVPTQYV FLVRFIKASV SDPEMENMVH
301: FLAELGMMHY DCLKFCPSML AASAVYTARC SLNKSPAWTD TLKFHTGYSE SEIMECSKLL ALHHSRCGES KLRAVYKKYS KIENGGVALV SPAKSLLIVP
401: PLPEKSAVEK FRFSAEFIEM RRVALDVFVN RIALHPELRH SEDLKTFLQA DEETMERFRF HETGLFKTKP ADLMQMFRDV QSKVSDAVLG KEKPVEETTP
501: EYEKLKHYVF ELENHLAEAH KHAYRLVKRH RELSQSLLDF GKALKLLAAC EGEPRGKSFS DLGTKSELLS IKLQKEAQQV LMNFEEPLKD YVRYVQSIKL
601: TIAERGSAYR QHCELAETTK LKEINLDKLM LTRSDKVGEA ENEYREREIK AESEEATIRF ERIAKRMNEE IVRFQEEKTE EMGVAFHQFA KGQARLANGV
701: ADAWRALLPK LEAVSSSV
101: PPKSKNVTYS SVLSARSKAA CGVTNKPKIL DIDESDKDNH LAAVEYVEDM YSFYKEVEKE SQPKMYMHIQ TEMNEKMRAI LVDWLLEVHV KFELNLETLY
201: LTVNIIDRFL SVKAVPKREL QLVGISALLI ASKYEEIWPP QVNDLVYVTD NAYNSKQILV MEKTILGNLE WYLTVPTQYV FLVRFIKASV SDPEMENMVH
301: FLAELGMMHY DCLKFCPSML AASAVYTARC SLNKSPAWTD TLKFHTGYSE SEIMECSKLL ALHHSRCGES KLRAVYKKYS KIENGGVALV SPAKSLLIVP
401: PLPEKSAVEK FRFSAEFIEM RRVALDVFVN RIALHPELRH SEDLKTFLQA DEETMERFRF HETGLFKTKP ADLMQMFRDV QSKVSDAVLG KEKPVEETTP
501: EYEKLKHYVF ELENHLAEAH KHAYRLVKRH RELSQSLLDF GKALKLLAAC EGEPRGKSFS DLGTKSELLS IKLQKEAQQV LMNFEEPLKD YVRYVQSIKL
601: TIAERGSAYR QHCELAETTK LKEINLDKLM LTRSDKVGEA ENEYREREIK AESEEATIRF ERIAKRMNEE IVRFQEEKTE EMGVAFHQFA KGQARLANGV
701: ADAWRALLPK LEAVSSSV
001: MATRANVPEQ VRGAPLVDGL KIQNKNGAVK SRRALGDIGN LVSVPGVQGG KAQPPINRPI TRSFRAQLLA NAQLERKPIN GDNKVPALGP KRQPLAARNP
101: EAQRAVQKKN LVVKQQTKPV EVIETKKEVT KKEVAMSPKN KKVTYSSVLS ARSKAACGIV NKPKIIDIDE SDKDNHLAAV EYVDDMYSFY KEVEKESQPK
201: MYMHIQTEMN EKMRAILIDW LLEVHIKFEL NLETLYLTVN IIDRFLSVKA VPKRELQLVG ISALLIASKY EEIWPPQVND LVYVTDNAYS SRQILVMEKA
301: ILGNLEWYLT VPTQYVFLVR FIKASMSDPE MENMVHFLAE LGMMHYDTLT FCPSMLAASA VYTARCSLNK SPAWTDTLQF HTGYTESEIM DCSKLLAFLH
401: SRCGESRLRA VYKKYSKAEN GGVAMVSPAK SLLSAAADWK KPVSS
101: EAQRAVQKKN LVVKQQTKPV EVIETKKEVT KKEVAMSPKN KKVTYSSVLS ARSKAACGIV NKPKIIDIDE SDKDNHLAAV EYVDDMYSFY KEVEKESQPK
201: MYMHIQTEMN EKMRAILIDW LLEVHIKFEL NLETLYLTVN IIDRFLSVKA VPKRELQLVG ISALLIASKY EEIWPPQVND LVYVTDNAYS SRQILVMEKA
301: ILGNLEWYLT VPTQYVFLVR FIKASMSDPE MENMVHFLAE LGMMHYDTLT FCPSMLAASA VYTARCSLNK SPAWTDTLQF HTGYTESEIM DCSKLLAFLH
401: SRCGESRLRA VYKKYSKAEN GGVAMVSPAK SLLSAAADWK KPVSS
Arabidopsis Description
CYCB1-2Cyclin-B1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q39067]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.