Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015762.1-P | Field mustard | nucleus | 99.54 | 99.54 |
| CDX88261 | Canola | nucleus | 97.91 | 98.14 |
| CDX68105 | Canola | nucleus | 81.9 | 89.37 |
| CDX85942 | Canola | nucleus | 83.53 | 88.24 |
| CDY31481 | Canola | nucleus | 40.84 | 81.11 |
| AT1G76310.3 | Thale cress | nucleus | 84.45 | 79.3 |
| CDX96631 | Canola | nucleus | 71.46 | 75.12 |
| CDY33634 | Canola | nucleus | 71.0 | 75.0 |
| CDY29520 | Canola | nucleus | 67.75 | 71.22 |
| PGSC0003DMT400075380 | Potato | nucleus | 37.35 | 67.93 |
| VIT_18s0001g14170.t01 | Wine grape | nucleus | 67.05 | 65.53 |
| Solyc04g082430.2.1 | Tomato | nucleus | 59.16 | 64.89 |
| PGSC0003DMT400025854 | Potato | nucleus | 65.43 | 63.95 |
| GSMUA_Achr5P19270_001 | Banana | cytosol | 30.39 | 60.37 |
| KRH60628 | Soybean | nucleus | 55.68 | 59.26 |
| KRH51329 | Soybean | nucleus, plastid | 56.84 | 59.04 |
| Solyc12g094600.1.1 | Tomato | nucleus | 58.0 | 58.82 |
| KXG20945 | Sorghum | nucleus | 56.38 | 57.31 |
| Zm00001d036360_P002 | Maize | nucleus | 56.15 | 57.08 |
| Os06t0726800-01 | Rice | nucleus | 55.45 | 57.04 |
| CDX72551 | Canola | nucleus | 52.2 | 56.11 |
| CDY67210 | Canola | nucleus | 51.74 | 54.93 |
| GSMUA_Achr11P... | Banana | nucleus | 51.74 | 54.66 |
| CDY26816 | Canola | nucleus | 51.51 | 54.55 |
| GSMUA_Achr8P13320_001 | Banana | nucleus | 53.13 | 54.52 |
| CDY29184 | Canola | nucleus | 52.9 | 54.42 |
| TraesCS7D01G536000.1 | Wheat | nucleus | 52.9 | 54.42 |
| TraesCS7B01G472800.1 | Wheat | nucleus | 52.9 | 54.42 |
| CDY30357 | Canola | nucleus | 51.51 | 54.28 |
| GSMUA_Achr5P19110_001 | Banana | nucleus | 53.36 | 54.25 |
| CDY07838 | Canola | nucleus | 52.44 | 54.07 |
| TraesCS7A01G549500.1 | Wheat | nucleus | 52.44 | 53.94 |
| HORVU7Hr1G121820.6 | Barley | nucleus | 52.44 | 53.81 |
| Os04t0563700-01 | Rice | mitochondrion | 51.28 | 52.62 |
| TraesCS2B01G422800.1 | Wheat | nucleus | 49.19 | 51.83 |
| TraesCS2A01G404800.1 | Wheat | nucleus | 48.49 | 51.6 |
| TraesCS2D01G401700.1 | Wheat | nucleus, plastid | 49.19 | 50.36 |
| EES12664 | Sorghum | nucleus | 49.42 | 49.31 |
| Zm00001d026129_P001 | Maize | nucleus | 48.49 | 49.06 |
| HORVU0Hr1G022770.1 | Barley | nucleus, plastid | 31.32 | 48.56 |
| Zm00001d002662_P010 | Maize | nucleus | 49.42 | 46.81 |
| HORVU2Hr1G096070.2 | Barley | nucleus | 48.72 | 44.59 |
| CDY62475 | Canola | nucleus | 31.55 | 38.75 |
| CDY69551 | Canola | nucleus | 31.55 | 38.31 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, vacuole | 55.92 | 36.08 |
| CDY11354 | Canola | plastid | 35.96 | 35.8 |
| CDX80988 | Canola | plastid | 35.27 | 35.51 |
| CDY06752 | Canola | nucleus | 22.27 | 33.68 |
| CDX69311 | Canola | nucleus | 31.55 | 32.46 |
| CDX75659 | Canola | nucleus | 31.79 | 32.01 |
| CDY06757 | Canola | nucleus, plastid | 26.22 | 31.13 |
| CDY17039 | Canola | nucleus | 25.99 | 30.85 |
| CDY47596 | Canola | nucleus | 25.99 | 30.85 |
| CDX88368 | Canola | plastid | 27.15 | 30.79 |
| CDX87520 | Canola | nucleus | 27.38 | 30.57 |
| CDY66770 | Canola | nucleus | 25.52 | 30.39 |
| CDY61993 | Canola | nucleus | 26.22 | 29.97 |
| CDY22369 | Canola | nucleus | 24.36 | 29.91 |
| CDY62408 | Canola | nucleus, plasma membrane, plastid | 14.62 | 29.86 |
| CDX85466 | Canola | plastid | 29.23 | 29.86 |
| CDY48212 | Canola | nucleus | 25.99 | 29.71 |
| CDY23653 | Canola | nucleus | 24.59 | 29.69 |
| CDY41784 | Canola | plastid | 23.2 | 29.41 |
| CDY17091 | Canola | nucleus | 24.36 | 29.33 |
| CDY02719 | Canola | plastid | 28.77 | 28.9 |
| CDY53304 | Canola | plastid | 27.15 | 28.61 |
| CDY17037 | Canola | nucleus, plastid | 23.9 | 28.3 |
| CDX97090 | Canola | nucleus | 28.54 | 28.21 |
| CDX81722 | Canola | nucleus, plastid | 26.22 | 28.04 |
| CDY47595 | Canola | nucleus, plastid | 23.9 | 27.76 |
| CDX87087 | Canola | plastid | 26.68 | 27.58 |
| CDX92090 | Canola | mitochondrion, nucleus | 22.74 | 27.45 |
| CDY65994 | Canola | plastid | 28.07 | 27.31 |
| CDX96836 | Canola | nucleus, plastid | 27.84 | 27.27 |
| CDX69768 | Canola | nucleus, plastid | 27.61 | 27.23 |
| CDY66415 | Canola | nucleus | 27.38 | 27.19 |
| CDX79389 | Canola | plastid | 27.15 | 27.02 |
| CDY25649 | Canola | plastid | 27.38 | 27.0 |
| CDX67944 | Canola | plastid | 26.91 | 26.85 |
| CDY36574 | Canola | mitochondrion, nucleus | 27.15 | 26.83 |
| CDY37592 | Canola | mitochondrion, plastid | 27.61 | 26.04 |
| CDY38664 | Canola | nucleus, plastid | 27.38 | 25.93 |
| CDY39984 | Canola | plastid | 26.91 | 25.89 |
| CDX87305 | Canola | plastid | 26.68 | 24.89 |
| CDY33338 | Canola | nucleus | 31.55 | 23.29 |
| CDY14091 | Canola | plastid | 35.03 | 23.02 |
| CDY35083 | Canola | cytosol, endoplasmic reticulum, nucleus | 32.02 | 22.66 |
| CDX96819 | Canola | nucleus | 32.25 | 21.55 |
| CDX83953 | Canola | nucleus | 32.25 | 21.22 |
| CDY04980 | Canola | nucleus | 35.03 | 21.03 |
| CDY19803 | Canola | golgi, nucleus, plasma membrane, plastid | 26.68 | 11.63 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.2 | GO:A0A078DF46 | EnsemblPlants:CDX87612 | ProteinID:CDX87612 | ProteinID:CDX87612.1 |
| InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00146618001 | PFAM:PF00134 | PFAM:PF02984 | PIRSF:PIRSF001771 |
| ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF350 | SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 |
| UniParc:UPI0004EF3069 | SEG:seg | : | : | : | : |
Description
BnaA07g32610D
Coordinates
chrLK031850:+:1469814..1472081
Molecular Weight (calculated)
49166.9 Da
IEP (calculated)
4.809
GRAVY (calculated)
-0.413
Length
431 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGSDENRHG VIGPMNPQGG VRGGKANPGN GQTRRALSNI NKNIIGAPVY PCAVNKRPLS EKNVMCHKKI LPPPVPAHRP ITRKFAAQLA ENNPQTKKEE
101: TKSEPVDIVI IDVEEEEEDG DFNEPMFVQH TEAMLDEIDR MEGIEMEDSN DTEEEEEEAV MDIDSCDKKN PLAVVDYIDD IYDFYKKNEC RSCVPPNYME
201: NQPDINERMR GILVDWLIEV HYKFELMEET LYLTINLIDR FLAVHHHVAR KKLQLVGVTA MLLACKYEEV SVPVVDDLIL ISDKAYTRRE VLDMEKLMAN
301: TLQFNFCLPT PYVFMRRFLK AAQSDQKVEL LSFFIVELCL VEYEMLQYAP SQLAASAIYT AHSTLKGFEE WSKTCEFYTG YTEEKLMECS RKMAGLHHEA
401: GTGKLTGVYR KYNTSKFGYA SRTEPAGFLL L
101: TKSEPVDIVI IDVEEEEEDG DFNEPMFVQH TEAMLDEIDR MEGIEMEDSN DTEEEEEEAV MDIDSCDKKN PLAVVDYIDD IYDFYKKNEC RSCVPPNYME
201: NQPDINERMR GILVDWLIEV HYKFELMEET LYLTINLIDR FLAVHHHVAR KKLQLVGVTA MLLACKYEEV SVPVVDDLIL ISDKAYTRRE VLDMEKLMAN
301: TLQFNFCLPT PYVFMRRFLK AAQSDQKVEL LSFFIVELCL VEYEMLQYAP SQLAASAIYT AHSTLKGFEE WSKTCEFYTG YTEEKLMECS RKMAGLHHEA
401: GTGKLTGVYR KYNTSKFGYA SRTEPAGFLL L
001: MGGSDENRHG VIGPMNRQQG GLRGGKVIPT NGQTRRALSN INKNIIGAPV YPCAVKRPFT EKNGICNKKI PPVPVHRPVT RKFAAQLAEN NLQIHKEETK
101: KPDLISNEAL DRIITDVEEG DFNEPMFVQH TEAMLEEIDK MEGIEMQDSN DIDAEVEESV MDIDSCDKNN PLSVVEYIND IYCFYKKNEC RSCVPPNYME
201: NQHDINERMR GILFDWLIEV HYKFELMEET LYLTINLIDR FLAVHQHIAR KKLQLVGVTA MLLACKYEEV SVPVVDDLIL ISDKAYTRTE ILDMEKLMAN
301: TLQFNFCLPT PYVFMRRFLK AAQSDKKLEL LSFFMIELCL VEYEMLQYTP SQLAASAIYT AQSTLKGYED WSKTSEFHSG YTEEALLECS RKMVGLHHKA
401: GTGKLTGVHR KYNTSKFGYA ARIEPAGFLL L
101: KPDLISNEAL DRIITDVEEG DFNEPMFVQH TEAMLEEIDK MEGIEMQDSN DIDAEVEESV MDIDSCDKNN PLSVVEYIND IYCFYKKNEC RSCVPPNYME
201: NQHDINERMR GILFDWLIEV HYKFELMEET LYLTINLIDR FLAVHQHIAR KKLQLVGVTA MLLACKYEEV SVPVVDDLIL ISDKAYTRTE ILDMEKLMAN
301: TLQFNFCLPT PYVFMRRFLK AAQSDKKLEL LSFFMIELCL VEYEMLQYTP SQLAASAIYT AQSTLKGYED WSKTSEFHSG YTEEALLECS RKMVGLHHKA
401: GTGKLTGVHR KYNTSKFGYA ARIEPAGFLL L
Arabidopsis Description
CYCB2;4CYCLIN B2;4 [Source:TAIR;Acc:AT1G76310]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.