Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY62475 | Canola | nucleus | 98.03 | 99.15 |
| Bra002046.1-P | Field mustard | nucleus | 93.52 | 84.48 |
| AT3G11520.1 | Thale cress | nucleus | 78.87 | 67.63 |
| TraesCSU01G217300.1 | Wheat | cytosol | 34.93 | 57.41 |
| KRH66720 | Soybean | endoplasmic reticulum, vacuole | 31.55 | 56.28 |
| CDY11354 | Canola | plastid | 68.45 | 56.12 |
| CDX80988 | Canola | plastid | 66.48 | 55.14 |
| Zm00001d019469_P001 | Maize | extracellular | 20.56 | 51.05 |
| KXG24389 | Sorghum | nucleus | 34.93 | 49.21 |
| VIT_08s0040g00930.t01 | Wine grape | nucleus | 59.72 | 46.8 |
| KRH66715 | Soybean | nucleus | 51.55 | 46.68 |
| CDX69311 | Canola | nucleus | 54.65 | 46.3 |
| KRG95055 | Soybean | nucleus | 59.15 | 46.15 |
| CDX75659 | Canola | nucleus | 55.49 | 46.03 |
| KRH66713 | Soybean | nucleus | 58.31 | 45.59 |
| GSMUA_AchrUn_... | Banana | nucleus | 37.46 | 44.63 |
| Solyc10g078330.1.1 | Tomato | nucleus | 52.96 | 44.44 |
| HORVU0Hr1G001680.1 | Barley | nucleus | 40.0 | 44.38 |
| PGSC0003DMT400018480 | Potato | nucleus | 52.96 | 44.24 |
| Solyc10g080950.1.1 | Tomato | nucleus | 57.18 | 43.94 |
| VIT_13s0067g01420.t01 | Wine grape | nucleus | 56.62 | 43.51 |
| PGSC0003DMT400072211 | Potato | nucleus | 56.34 | 43.1 |
| KRH66718 | Soybean | plastid | 45.07 | 42.9 |
| GSMUA_Achr10P... | Banana | nucleus | 54.08 | 42.38 |
| GSMUA_Achr7P21380_001 | Banana | nucleus | 54.08 | 42.01 |
| GSMUA_Achr4P10090_001 | Banana | nucleus | 50.14 | 41.88 |
| GSMUA_Achr8P23970_001 | Banana | nucleus | 51.27 | 41.84 |
| HORVU1Hr1G068080.1 | Barley | plastid | 40.28 | 41.81 |
| GSMUA_Achr3P24980_001 | Banana | nucleus | 47.32 | 41.79 |
| TraesCS1D01G309300.1 | Wheat | nucleus, plastid | 50.99 | 41.51 |
| HORVU3Hr1G078880.2 | Barley | nucleus | 52.96 | 41.5 |
| TraesCS1A01G309800.1 | Wheat | nucleus | 50.7 | 41.28 |
| TraesCS3D01G326600.1 | Wheat | nucleus | 52.68 | 41.1 |
| TraesCS3A01G333000.2 | Wheat | nucleus | 52.96 | 40.87 |
| TraesCS1B01G320900.1 | Wheat | nucleus, plastid | 50.14 | 40.83 |
| TraesCS3B01G363200.3 | Wheat | nucleus | 52.96 | 40.78 |
| KRG95056 | Soybean | cytosol | 43.94 | 40.31 |
| Zm00001d012560_P002 | Maize | nucleus, plastid | 50.7 | 40.09 |
| EES03772 | Sorghum | nucleus, plastid | 50.42 | 39.87 |
| TraesCS1D01G309400.1 | Wheat | nucleus | 48.73 | 39.59 |
| HORVU0Hr1G026010.1 | Barley | nucleus, plastid | 49.3 | 39.5 |
| HORVU1Hr1G068160.2 | Barley | nucleus, plastid | 49.3 | 39.5 |
| HORVU1Hr1G068010.7 | Barley | mitochondrion, nucleus | 46.2 | 39.05 |
| TraesCS1B01G321000.1 | Wheat | nucleus | 47.89 | 38.99 |
| Zm00001d010656_P001 | Maize | nucleus | 48.73 | 38.79 |
| TraesCS7A01G229300.1 | Wheat | endoplasmic reticulum | 34.93 | 37.69 |
| HORVU0Hr1G001690.16 | Barley | nucleus, peroxisome | 46.48 | 37.67 |
| CDY31481 | Canola | nucleus | 22.82 | 37.33 |
| CDY14091 | Canola | plastid | 68.45 | 37.04 |
| Os01t0281200-01 | Rice | nucleus | 43.94 | 36.88 |
| EES18429 | Sorghum | mitochondrion | 47.61 | 36.74 |
| Zm00001d043164_P002 | Maize | nucleus | 49.3 | 36.16 |
| TraesCS3D01G195200.1 | Wheat | plastid | 41.97 | 36.08 |
| TraesCS3A01G192100.1 | Wheat | nucleus, plastid | 41.41 | 35.51 |
| CDY26816 | Canola | nucleus | 39.44 | 34.4 |
| Os02t0627800-00 | Rice | cytosol, mitochondrion, peroxisome | 38.31 | 34.34 |
| Os05t0493500-00 | Rice | nucleus | 46.76 | 34.09 |
| CDY06752 | Canola | nucleus | 27.32 | 34.04 |
| CDY29184 | Canola | nucleus | 40.0 | 33.89 |
| CDY07838 | Canola | nucleus | 39.72 | 33.73 |
| CDX85942 | Canola | nucleus | 38.59 | 33.58 |
| CDY04980 | Canola | nucleus | 67.89 | 33.57 |
| CDY30357 | Canola | nucleus | 38.03 | 33.01 |
| CDX72551 | Canola | nucleus | 36.9 | 32.67 |
| CDX68105 | Canola | nucleus | 35.49 | 31.9 |
| CDY67210 | Canola | nucleus | 36.34 | 31.77 |
| EES02793 | Sorghum | nucleus | 41.41 | 31.75 |
| CDX96631 | Canola | nucleus | 36.62 | 31.71 |
| CDX88261 | Canola | nucleus | 38.31 | 31.63 |
| CDX87612 | Canola | nucleus | 38.31 | 31.55 |
| CDY33634 | Canola | nucleus | 36.06 | 31.37 |
| CDY29520 | Canola | nucleus | 36.06 | 31.22 |
| CDY23653 | Canola | nucleus | 31.27 | 31.09 |
| Zm00001d008221_P001 | Maize | nucleus | 41.41 | 30.69 |
| CDY06757 | Canola | nucleus, plastid | 31.27 | 30.58 |
| CDY66770 | Canola | nucleus | 30.7 | 30.11 |
| CDY17037 | Canola | nucleus, plastid | 30.7 | 29.95 |
| CDY47595 | Canola | nucleus, plastid | 31.27 | 29.92 |
| HORVU3Hr1G040990.2 | Barley | nucleus, plastid | 41.13 | 29.67 |
| CDY22369 | Canola | nucleus | 29.3 | 29.63 |
| CDY17091 | Canola | nucleus | 29.86 | 29.61 |
| CDY47596 | Canola | nucleus | 30.14 | 29.48 |
| CDY17039 | Canola | nucleus | 29.86 | 29.2 |
| CDX88368 | Canola | plastid | 29.58 | 27.63 |
| CDY41784 | Canola | plastid | 25.92 | 27.06 |
| CDY62408 | Canola | nucleus, plasma membrane, plastid | 15.77 | 26.54 |
| CDX87520 | Canola | nucleus | 28.73 | 26.42 |
| Zm00001d020033_P001 | Maize | nucleus | 40.28 | 26.29 |
| CDY61993 | Canola | nucleus | 27.89 | 26.26 |
| Zm00001d020996_P001 | Maize | nucleus | 39.72 | 25.92 |
| CDX87087 | Canola | plastid | 30.42 | 25.9 |
| CDX85466 | Canola | plastid | 30.7 | 25.83 |
| CDY48212 | Canola | nucleus | 27.32 | 25.73 |
| CDY02719 | Canola | plastid | 30.7 | 25.41 |
| CDX92090 | Canola | mitochondrion, nucleus | 25.35 | 25.21 |
| CDY53304 | Canola | plastid | 28.73 | 24.94 |
| CDY65994 | Canola | plastid | 30.99 | 24.83 |
| CDX81722 | Canola | nucleus, plastid | 28.17 | 24.81 |
| CDY25649 | Canola | plastid | 29.86 | 24.26 |
| CDX79389 | Canola | plastid | 29.3 | 24.02 |
| CDY66415 | Canola | nucleus | 29.3 | 23.96 |
| CDX96836 | Canola | nucleus, plastid | 29.3 | 23.64 |
| CDX97090 | Canola | nucleus | 29.01 | 23.62 |
| CDY36574 | Canola | mitochondrion, nucleus | 29.01 | 23.62 |
| CDX67944 | Canola | plastid | 28.45 | 23.38 |
| CDX69768 | Canola | nucleus, plastid | 28.73 | 23.34 |
| CDY39984 | Canola | plastid | 28.73 | 22.77 |
| CDY38664 | Canola | nucleus, plastid | 28.45 | 22.2 |
| CDY37592 | Canola | mitochondrion, plastid | 28.45 | 22.1 |
| CDX87305 | Canola | plastid | 28.17 | 21.64 |
| CDY33338 | Canola | nucleus | 34.65 | 21.06 |
| CDY35083 | Canola | cytosol, endoplasmic reticulum, nucleus | 34.08 | 19.87 |
| CDX96819 | Canola | nucleus | 34.93 | 19.22 |
| CDX83953 | Canola | nucleus | 34.08 | 18.47 |
| CDY19803 | Canola | golgi, nucleus, plasma membrane, plastid | 30.7 | 11.02 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.2 | GO:A0A078JVH5 | UniProt:A0A078JVH5 | EnsemblPlants:CDY69551 | ProteinID:CDY69551 |
| ProteinID:CDY69551.1 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00088833001 | PFAM:PF00134 | PFAM:PF02984 |
| PIRSF:PIRSF001771 | ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF267 | SMART:SM00385 | SMART:SM01332 |
| SUPFAM:SSF47954 | UniParc:UPI0004EE045F | SEG:seg | : | : | : |
Description
BnaAnng30800DBnaAnng30800D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JVH5]
Coordinates
chrLK039688:+:2590..3985
Molecular Weight (calculated)
40195.5 Da
IEP (calculated)
6.528
GRAVY (calculated)
-0.139
Length
355 amino acids
Sequence
(BLAST)
(BLAST)
001: MATRRVRGDP VENRRALGDI GNIASLPGAE EAGKLNRPLT RNFRAQLLEN ANKKDVAKNQ EGVRAVQRKA RAAVVVKPPQ PHEVIVISPD TNEVAKAKKN
101: VTYSSVLNAR SKAASKALDI DSADKDNDLA AVEYVEDMYS FYKEVENESK PQMYMQTQAE INEKMRSILV DWLVDVHVKF DLSPETLYLT INIVDRFLSL
201: KPVPRRELQL VGVSALLIAS KYEEIWPPQV NDLVYVTDNS YQSKQILVME KTILGNLEWY LTVPTQYVFL ARFIKAAVPD PEMESMVHFL AELGLMHYDA
301: LKFCPSMLAA SAVYAARCFL SKTPAWTETL TFHTGYSEHE LMLVILFYFF SLSCF
101: VTYSSVLNAR SKAASKALDI DSADKDNDLA AVEYVEDMYS FYKEVENESK PQMYMQTQAE INEKMRSILV DWLVDVHVKF DLSPETLYLT INIVDRFLSL
201: KPVPRRELQL VGVSALLIAS KYEEIWPPQV NDLVYVTDNS YQSKQILVME KTILGNLEWY LTVPTQYVFL ARFIKAAVPD PEMESMVHFL AELGLMHYDA
301: LKFCPSMLAA SAVYAARCFL SKTPAWTETL TFHTGYSEHE LMLVILFYFF SLSCF
001: MATGPVVHPQ PVRGDPIDLK NAAAKNRRAL GDIGNVDSLI GVEGGKLNRP ITRNFRAQLL ENAQVAAAAN KKAPILDGVT KKQEVVRAVQ KKARGDKREP
101: SKPIEVIVIS PDTNEVAKAK ENKKKVTYSS VLDARSKAAS KTLDIDYVDK ENDLAAVEYV EDMYIFYKEV VNESKPQMYM HTQPEIDEKM RSILIDWLVE
201: VHVKFDLSPE TLYLTVNIID RFLSLKTVPR RELQLVGVSA LLIASKYEEI WPPQVNDLVY VTDNSYNSRQ ILVMEKTILG NLEWYLTVPT QYVFLVRFIK
301: ASGSDQKLEN LVHFLAELGL MHHDSLMFCP SMLAASAVYT ARCCLNKTPT WTDTLKFHTG YSESQLMLVF LILYTSKFVI ILFVY
101: SKPIEVIVIS PDTNEVAKAK ENKKKVTYSS VLDARSKAAS KTLDIDYVDK ENDLAAVEYV EDMYIFYKEV VNESKPQMYM HTQPEIDEKM RSILIDWLVE
201: VHVKFDLSPE TLYLTVNIID RFLSLKTVPR RELQLVGVSA LLIASKYEEI WPPQVNDLVY VTDNSYNSRQ ILVMEKTILG NLEWYLTVPT QYVFLVRFIK
301: ASGSDQKLEN LVHFLAELGL MHHDSLMFCP SMLAASAVYT ARCCLNKTPT WTDTLKFHTG YSESQLMLVF LILYTSKFVI ILFVY
Arabidopsis Description
CYCB1-3Cyclin-B1-3 [Source:UniProtKB/Swiss-Prot;Acc:Q39069]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.