Subcellular Localization
min:
: max
Winner_takes_all: nucleus, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY17037 | Canola | nucleus, plastid | 94.34 | 96.15 |
| CDY06752 | Canola | nucleus | 70.62 | 91.93 |
| CDY17091 | Canola | nucleus | 87.06 | 90.22 |
| AT1G47230.2 | Thale cress | nucleus, plastid | 80.86 | 81.08 |
| CDY23653 | Canola | nucleus | 70.62 | 73.39 |
| CDY66770 | Canola | nucleus | 70.08 | 71.82 |
| CDY06757 | Canola | nucleus, plastid | 69.54 | 71.07 |
| CDY47596 | Canola | nucleus | 68.73 | 70.25 |
| CDY22369 | Canola | nucleus | 66.31 | 70.09 |
| CDY17039 | Canola | nucleus | 68.19 | 69.7 |
| VIT_18s0001g09580.t01 | Wine grape | nucleus, plastid | 60.65 | 61.64 |
| OQU91386 | Sorghum | nucleus | 41.78 | 59.39 |
| KRH52056 | Soybean | nucleus | 33.42 | 58.77 |
| PGSC0003DMT400055428 | Potato | nucleus | 57.68 | 58.15 |
| Solyc04g078310.2.1 | Tomato | nucleus | 57.41 | 57.41 |
| Solyc12g088530.1.1 | Tomato | nucleus | 53.91 | 56.5 |
| GSMUA_Achr10P... | Banana | nucleus | 47.98 | 56.15 |
| PGSC0003DMT400030222 | Potato | nucleus | 53.37 | 55.93 |
| KRH15427 | Soybean | nucleus, plastid | 54.72 | 55.77 |
| KRH61375 | Soybean | nucleus | 48.79 | 55.35 |
| KRH05614 | Soybean | nucleus | 54.72 | 55.31 |
| PGSC0003DMT400030176 | Potato | nucleus | 52.56 | 54.78 |
| Solyc12g088520.1.1 | Tomato | nucleus | 51.75 | 54.08 |
| KRH61369 | Soybean | nucleus | 46.9 | 53.21 |
| Solyc12g088470.1.1 | Tomato | nucleus | 50.94 | 52.5 |
| KRH61371 | Soybean | nucleus | 49.33 | 52.44 |
| TraesCS4D01G076900.1 | Wheat | nucleus | 52.02 | 52.16 |
| TraesCS5B01G078200.1 | Wheat | plastid | 52.83 | 51.99 |
| Solyc12g088500.1.1 | Tomato | nucleus | 49.6 | 51.98 |
| TraesCS5A01G072000.1 | Wheat | plastid | 52.56 | 51.86 |
| TraesCS5D01G084700.1 | Wheat | nucleus | 52.83 | 51.85 |
| HORVU4Hr1G013320.1 | Barley | nucleus | 52.02 | 51.74 |
| TraesCS4B01G078300.1 | Wheat | nucleus | 51.48 | 51.48 |
| GSMUA_Achr6P11130_001 | Banana | nucleus | 54.18 | 51.41 |
| KRH52055 | Soybean | nucleus | 49.6 | 51.4 |
| GSMUA_Achr2P21530_001 | Banana | cytosol, nucleus, plastid | 39.35 | 51.05 |
| Zm00001d033365_P002 | Maize | nucleus | 50.94 | 50.81 |
| TraesCS4A01G236700.2 | Wheat | plastid | 51.21 | 50.67 |
| KRH61373 | Soybean | nucleus, plastid | 49.33 | 48.8 |
| GSMUA_Achr2P21520_001 | Banana | nucleus | 47.17 | 48.61 |
| Zm00001d013744_P001 | Maize | nucleus | 46.09 | 47.9 |
| Os12t0581800-01 | Rice | nucleus, plastid | 49.33 | 47.53 |
| TraesCS4D01G253200.1 | Wheat | nucleus | 29.92 | 45.49 |
| Zm00001d030849_P001 | Maize | nucleus | 50.13 | 43.97 |
| EES16237 | Sorghum | nucleus, plastid | 50.4 | 43.69 |
| HORVU5Hr1G018820.2 | Barley | nucleus, plastid | 52.29 | 42.73 |
| Zm00001d041334_P001 | Maize | nucleus, plastid | 49.33 | 41.88 |
| CDY48212 | Canola | nucleus | 41.51 | 40.85 |
| TraesCS4D01G253900.1 | Wheat | nucleus | 41.78 | 40.79 |
| TraesCS4B01G254000.1 | Wheat | nucleus | 41.24 | 40.69 |
| CDY61993 | Canola | nucleus | 40.97 | 40.32 |
| TraesCS4A01G050700.1 | Wheat | nucleus | 40.97 | 40.0 |
| CDY62408 | Canola | nucleus, plasma membrane, plastid | 22.64 | 39.81 |
| CDY53304 | Canola | plastid | 43.13 | 39.12 |
| EER95303 | Sorghum | nucleus, plastid | 40.16 | 39.11 |
| CDY41784 | Canola | plastid | 35.31 | 38.53 |
| TraesCS4A01G051300.1 | Wheat | nucleus | 35.58 | 38.48 |
| CDX81722 | Canola | nucleus, plastid | 41.78 | 38.46 |
| CDX88368 | Canola | plastid | 39.35 | 38.42 |
| CDX87520 | Canola | nucleus | 39.35 | 37.82 |
| CDX87087 | Canola | plastid | 42.32 | 37.65 |
| TraesCS4B01G253100.1 | Wheat | nucleus | 34.5 | 37.54 |
| CDY36574 | Canola | mitochondrion, nucleus | 43.67 | 37.16 |
| CDY31481 | Canola | nucleus | 21.56 | 36.87 |
| CDY66415 | Canola | nucleus | 42.86 | 36.64 |
| CDX96836 | Canola | nucleus, plastid | 43.13 | 36.36 |
| CDX92090 | Canola | mitochondrion, nucleus | 34.5 | 35.85 |
| CDX79389 | Canola | plastid | 41.78 | 35.8 |
| CDX97090 | Canola | nucleus | 42.05 | 35.78 |
| CDX67944 | Canola | plastid | 41.24 | 35.42 |
| CDX69768 | Canola | nucleus, plastid | 41.24 | 35.01 |
| CDX85466 | Canola | plastid | 39.62 | 34.83 |
| CDY02719 | Canola | plastid | 39.35 | 34.03 |
| CDY39984 | Canola | plastid | 40.97 | 33.93 |
| HORVU4Hr1G069310.3 | Barley | nucleus | 37.74 | 33.73 |
| CDY38664 | Canola | nucleus, plastid | 41.24 | 33.63 |
| CDY37592 | Canola | mitochondrion, plastid | 41.24 | 33.48 |
| CDY25649 | Canola | plastid | 39.35 | 33.41 |
| CDY65994 | Canola | plastid | 39.62 | 33.18 |
| CDX87305 | Canola | plastid | 41.24 | 33.12 |
| CDY62475 | Canola | nucleus | 29.92 | 31.62 |
| CDY69551 | Canola | nucleus | 29.92 | 31.27 |
| Os03t0607600-00 | Rice | nucleus | 49.6 | 30.26 |
| Zm00001d048127_P001 | Maize | plastid | 37.47 | 29.02 |
| CDY29184 | Canola | nucleus | 32.61 | 28.88 |
| CDX72551 | Canola | nucleus | 31.0 | 28.68 |
| CDY07838 | Canola | nucleus | 31.81 | 28.23 |
| CDY67210 | Canola | nucleus | 30.73 | 28.08 |
| CDY30357 | Canola | nucleus | 30.73 | 27.87 |
| CDY26816 | Canola | nucleus | 30.46 | 27.76 |
| CDY11354 | Canola | plastid | 32.34 | 27.71 |
| Os03t0208700-00 | Rice | nucleus | 30.46 | 27.63 |
| CDX80988 | Canola | plastid | 31.27 | 27.1 |
| CDX69311 | Canola | nucleus | 29.11 | 25.78 |
| CDY33634 | Canola | nucleus | 28.3 | 25.74 |
| CDY29520 | Canola | nucleus | 28.3 | 25.61 |
| CDX85942 | Canola | nucleus | 28.03 | 25.49 |
| CDX75659 | Canola | nucleus | 29.38 | 25.47 |
| CDX96631 | Canola | nucleus | 28.03 | 25.37 |
| CDX88261 | Canola | nucleus | 27.76 | 23.95 |
| CDX87612 | Canola | nucleus | 27.76 | 23.9 |
| CDX68105 | Canola | nucleus | 24.8 | 23.29 |
| CDY14091 | Canola | plastid | 31.27 | 17.68 |
| CDY33338 | Canola | nucleus | 26.42 | 16.78 |
| CDY04980 | Canola | nucleus | 31.81 | 16.43 |
| CDY35083 | Canola | cytosol, endoplasmic reticulum, nucleus | 25.88 | 15.76 |
| CDY19803 | Canola | golgi, nucleus, plasma membrane, plastid | 41.78 | 15.67 |
| CDX96819 | Canola | nucleus | 26.68 | 15.35 |
| CDX83953 | Canola | nucleus | 26.68 | 15.11 |
| Os03t0208800-00 | Rice | nucleus | 15.36 | 14.36 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.1 | GO:A0A078I9J3 | UniProt:A0A078I9J3 | EnsemblPlants:CDY47595 | ProteinID:CDY47595 |
| ProteinID:CDY47595.1 | InterPro:Cyclin-A_plant | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00087708001 | PFAM:PF00134 |
| PFAM:PF02984 | PIRSF:PIRSF001771 | ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF270 | SMART:SM00385 |
| SMART:SM01332 | SUPFAM:SSF47954 | UniParc:UPI0004EEDB30 | SEG:seg | : | : |
Description
BnaC08g04650DBnaC08g04650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I9J3]
Coordinates
chrLK032724:-:63237..64992
Molecular Weight (calculated)
42131.0 Da
IEP (calculated)
7.308
GRAVY (calculated)
-0.249
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MAENQNSTRM TRAAAKRKAS TADENPVSKK RVVLGELPNN SNVAAPLIPL QERETQKPKS TLVAAKKQTK NLPIPPAAAV LPQTVDFESG SSDPQMCGPY
101: VADICAYLRE MEGKLKQRPL HDYIEKVQSD LTPSMRGVLM DWLVEVAEEY NLVSDTLYLT VSYVDRFLSE KPINRQRLQL VGVSAMLIAS KYEEISPPKV
201: EDFVYITDNT FTRQDVVSME ADILLALQFE LGCPTIKTFL RRFTRVAQED FNESLLQIEC LCCYLSELSL LDYSCVKFLP SMLAASAVFL ARFIIRPKQH
301: PWNQMLEEYT KYKASDLQQP VGIIHDLYLS RRGNSLEAVR NKYKQHKFKC VATMPVSPEL PQAFFEDVTI R
101: VADICAYLRE MEGKLKQRPL HDYIEKVQSD LTPSMRGVLM DWLVEVAEEY NLVSDTLYLT VSYVDRFLSE KPINRQRLQL VGVSAMLIAS KYEEISPPKV
201: EDFVYITDNT FTRQDVVSME ADILLALQFE LGCPTIKTFL RRFTRVAQED FNESLLQIEC LCCYLSELSL LDYSCVKFLP SMLAASAVFL ARFIIRPKQH
301: PWNQMLEEYT KYKASDLQQP VGIIHDLYLS RRGNSLEAVR NKYKQHKFKC VATMPVSPEL PQAFFEDVTI R
001: MAENQNCARM TRAAAKRKAS SMALDENPVS KKRVVLGELP NMSNVVAVPN QERETLKAKT SVNTSKRQMK KALMIPEASV LIESRSVDPQ MCEPFASDIC
101: AYLREMEGKP KHRPLPDYIE KVQSDLTPHM RAVLVDWLVE VAEEYKLVSD TLYLTISYVD RFLSVKPINR QKLQLVGVSA MLIASKYEEI GPPKVEDFCY
201: ITDNTFTKQE VVSMEADILL ALQFELGSPT IKTFLRRFTR VAQEDFKDSQ LQIEFLCCYL SELSMLDYTC VKYLPSLLSA SAVFLARFII RPKQHPWNQM
301: LEEYTKYKAA DLQVCVGIIH DLYLSRRGNT LEAVRNKYKQ HKYKCVATMP VSPELPLAFF EDITIRGMA
101: AYLREMEGKP KHRPLPDYIE KVQSDLTPHM RAVLVDWLVE VAEEYKLVSD TLYLTISYVD RFLSVKPINR QKLQLVGVSA MLIASKYEEI GPPKVEDFCY
201: ITDNTFTKQE VVSMEADILL ALQFELGSPT IKTFLRRFTR VAQEDFKDSQ LQIEFLCCYL SELSMLDYTC VKYLPSLLSA SAVFLARFII RPKQHPWNQM
301: LEEYTKYKAA DLQVCVGIIH DLYLSRRGNT LEAVRNKYKQ HKYKCVATMP VSPELPLAFF EDITIRGMA
Arabidopsis Description
CYCA3-4Cyclin-A3-4 [Source:UniProtKB/Swiss-Prot;Acc:Q3ECW2]
SUBAcon: [nucleus,plastid]
SUBAcon: [nucleus,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.