Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 3
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY62408 | Canola | nucleus, plasma membrane, plastid | 55.46 | 93.84 |
| Bra022173.1-P | Field mustard | nucleus, plastid | 92.16 | 87.27 |
| CDX87520 | Canola | nucleus | 69.47 | 64.25 |
| CDX88368 | Canola | plastid | 67.79 | 63.68 |
| CDY41784 | Canola | plastid | 58.26 | 61.18 |
| AT1G77390.1 | Thale cress | plastid | 62.18 | 50.23 |
| Os05t0237100-01 | Rice | extracellular | 26.33 | 47.72 |
| CDY06752 | Canola | nucleus | 33.61 | 42.11 |
| CDY02719 | Canola | plastid | 50.14 | 41.72 |
| CDX85466 | Canola | plastid | 49.3 | 41.71 |
| CDY25649 | Canola | plastid | 49.02 | 40.05 |
| CDY65994 | Canola | plastid | 49.02 | 39.5 |
| Zm00001d032128_P001 | Maize | cytosol | 17.37 | 39.24 |
| CDY22369 | Canola | nucleus | 38.1 | 38.75 |
| TraesCS1B01G151800.3 | Wheat | nucleus | 38.38 | 38.59 |
| KRH53279 | Soybean | plastid | 49.02 | 36.46 |
| KRH64625 | Soybean | plastid | 49.3 | 36.36 |
| CDY17091 | Canola | nucleus | 36.13 | 36.03 |
| CDY23653 | Canola | nucleus | 35.85 | 35.85 |
| Os12t0298950-00 | Rice | nucleus | 44.82 | 35.79 |
| CDY47596 | Canola | nucleus | 36.13 | 35.54 |
| Solyc11g005090.1.1 | Tomato | plastid | 48.74 | 35.51 |
| PGSC0003DMT400015424 | Potato | plastid | 46.78 | 35.38 |
| VIT_18s0001g02060.t01 | Wine grape | plastid | 49.02 | 35.35 |
| CDY66770 | Canola | nucleus | 35.57 | 35.08 |
| CDY06757 | Canola | nucleus, plastid | 35.57 | 34.99 |
| CDY17039 | Canola | nucleus | 35.57 | 34.99 |
| CDY17037 | Canola | nucleus, plastid | 35.29 | 34.62 |
| CDY47595 | Canola | nucleus, plastid | 35.85 | 34.5 |
| CDY48212 | Canola | nucleus | 36.41 | 34.48 |
| KRH16410 | Soybean | plastid | 47.9 | 33.93 |
| CDY61993 | Canola | nucleus | 35.57 | 33.69 |
| KRH17986 | Soybean | plastid | 47.34 | 33.6 |
| CDY53304 | Canola | plastid | 37.82 | 33.01 |
| CDY31481 | Canola | nucleus | 19.89 | 32.72 |
| Os01t0233100-00 | Rice | nucleus, plastid | 44.82 | 32.59 |
| Os01t0233500-01 | Rice | nucleus, plastid | 46.22 | 32.48 |
| KXG21616 | Sorghum | nucleus, plastid | 43.42 | 32.36 |
| CDX81722 | Canola | nucleus, plastid | 36.41 | 32.26 |
| TraesCS3D01G164600.1 | Wheat | plastid | 45.94 | 32.16 |
| TraesCS3B01G183400.1 | Wheat | plastid | 45.94 | 32.16 |
| TraesCS3A01G157000.1 | Wheat | plastid | 45.66 | 31.77 |
| GSMUA_Achr2P19220_001 | Banana | nucleus, plastid | 44.54 | 31.67 |
| Zm00001d021353_P002 | Maize | mitochondrion, nucleus | 17.65 | 31.5 |
| TraesCS1D01G134100.2 | Wheat | nucleus, plastid | 42.02 | 31.45 |
| CDX87087 | Canola | plastid | 36.69 | 31.41 |
| GSMUA_Achr5P06960_001 | Banana | nucleus, plastid | 43.98 | 31.4 |
| Zm00001d040381_P001 | Maize | plastid | 46.78 | 31.33 |
| CDX96836 | Canola | nucleus, plastid | 37.53 | 30.45 |
| CDX97090 | Canola | nucleus | 36.97 | 30.28 |
| CDY36574 | Canola | mitochondrion, nucleus | 36.69 | 30.05 |
| CDX79389 | Canola | plastid | 36.41 | 30.02 |
| CDY66415 | Canola | nucleus | 36.41 | 29.95 |
| CDX69768 | Canola | nucleus, plastid | 36.13 | 29.52 |
| CDX67944 | Canola | plastid | 35.57 | 29.4 |
| Zm00001d009011_P001 | Maize | nucleus, plastid | 41.74 | 29.22 |
| CDY37592 | Canola | mitochondrion, plastid | 37.25 | 29.1 |
| CDY38664 | Canola | nucleus, plastid | 36.97 | 29.01 |
| CDY39984 | Canola | plastid | 35.85 | 28.57 |
| CDX87305 | Canola | plastid | 35.85 | 27.71 |
| TraesCS1A01G138300.1 | Wheat | nucleus, plastid | 40.62 | 27.62 |
| CDX72551 | Canola | nucleus | 29.41 | 26.18 |
| CDY67210 | Canola | nucleus | 29.69 | 26.11 |
| CDX69311 | Canola | nucleus | 30.53 | 26.01 |
| Zm00001d010404_P001 | Maize | nucleus | 35.01 | 25.77 |
| CDX75659 | Canola | nucleus | 30.81 | 25.7 |
| CDY62475 | Canola | nucleus | 25.21 | 25.64 |
| CDY69551 | Canola | nucleus | 25.21 | 25.35 |
| CDY29520 | Canola | nucleus | 27.17 | 23.66 |
| CDX80988 | Canola | plastid | 28.29 | 23.6 |
| CDY26816 | Canola | nucleus | 26.89 | 23.59 |
| CDY11354 | Canola | plastid | 28.57 | 23.56 |
| CDX85942 | Canola | nucleus | 26.89 | 23.53 |
| CDX96631 | Canola | nucleus | 26.89 | 23.41 |
| CDY33634 | Canola | nucleus | 26.61 | 23.28 |
| CDY30357 | Canola | nucleus | 26.61 | 23.23 |
| CDX68105 | Canola | nucleus | 25.49 | 23.04 |
| CDY07838 | Canola | nucleus | 26.89 | 22.97 |
| CDY29184 | Canola | nucleus | 26.89 | 22.91 |
| CDX87612 | Canola | nucleus | 27.45 | 22.74 |
| CDX88261 | Canola | nucleus | 27.17 | 22.56 |
| CDY33338 | Canola | nucleus | 25.49 | 15.58 |
| CDY14091 | Canola | plastid | 28.01 | 15.24 |
| CDY35083 | Canola | cytosol, endoplasmic reticulum, nucleus | 25.21 | 14.78 |
| CDX96819 | Canola | nucleus | 25.21 | 13.95 |
| CDY04980 | Canola | nucleus | 28.01 | 13.93 |
| CDX83953 | Canola | nucleus | 24.93 | 13.59 |
| CDY19803 | Canola | golgi, nucleus, plasma membrane, plastid | 37.25 | 13.45 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.1 | GO:A0A078DS36 | EnsemblPlants:CDX92090 | ProteinID:CDX92090 | ProteinID:CDX92090.1 |
| InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00153776001 | PFAM:PF00134 | PFAM:PF02984 | PIRSF:PIRSF001771 |
| ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF239 | SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 |
| UniParc:UPI0004EE8B26 | SEG:seg | : | : | : | : |
Description
BnaA05g23170D
Coordinates
chrLK031871:-:120309..123397
Molecular Weight (calculated)
40704.0 Da
IEP (calculated)
8.395
GRAVY (calculated)
-0.145
Length
357 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSTAKRTSY QKSGSPPFFS LLNFFSSFPT RKLGLGFNVN CEFVQLLKFH HCSKKTNQSK PLQLLNDDSS NLVEDPQLCG AFTCDIYEHH LRSSEAKKRP
101: AIDYMERVQS NIDATMRAIL VDWLVEVAEE FSLPPETLYL AVNCLDRYLS GNVITKLNLQ LLGVSCIMIS AKYYGRGSVR APLRQVESFC YITDYTYSRN
201: ELLEMESCVL NYLKFELTTP TANCFLSHFV PQGKREEVPS SHLLFESLAS YLCELSLLDY AMLRYAPSLV AASAVFLARY VLHPSRKPSW SSTLEHYTRY
301: RAQHLEACVK NLLRLCHESP SGDNVVAVRK KYSKAKYKFA ANMFYPSSLP VPQELFL
101: AIDYMERVQS NIDATMRAIL VDWLVEVAEE FSLPPETLYL AVNCLDRYLS GNVITKLNLQ LLGVSCIMIS AKYYGRGSVR APLRQVESFC YITDYTYSRN
201: ELLEMESCVL NYLKFELTTP TANCFLSHFV PQGKREEVPS SHLLFESLAS YLCELSLLDY AMLRYAPSLV AASAVFLARY VLHPSRKPSW SSTLEHYTRY
301: RAQHLEACVK NLLRLCHESP SGDNVVAVRK KYSKAKYKFA ANMFYPSSLP VPQELFL
001: MSNILQNRRS SFSSSTKSSL AKRQAPSSSE NSVKLMPAMT KKRAPLSNIT NQKIASRLQN SDSVHCSNKS AKLKIAPSVC VNASFSSNLQ QSIVPHKVAS
101: SPSKSDDGSV SMDETRSSSD SYKSPQVEYI ENDDVSAVVS IERKALSNLF ITPNSETIDN YCSRDVLSDM KKMDKNQIVN IDSNNGDPQL CATFACDIYK
201: HLRASEAKKR PDVDYMERVQ KDVNSSMRGI LVDWLIEVSE EYRLVPETLY LTVNYIDRYL SGNVISRQKL QLLGVACMMI AAKYEEICAP QVEEFCYITD
301: NTYLKDEVLD MESDVLNYLK FEMTAPTTKC FLRRFVRAAH GVHEAPLMQL ECMANYIAEL SLLEYTMLSH SPSLVAASAI FLAKYILDPT RRPWNSTLQH
401: YTQYKAMELR GCVKDLQRLC STAHGSTLPA VREKYSQHKY KFVAKKFCPS VIPQEFFNNS
101: SPSKSDDGSV SMDETRSSSD SYKSPQVEYI ENDDVSAVVS IERKALSNLF ITPNSETIDN YCSRDVLSDM KKMDKNQIVN IDSNNGDPQL CATFACDIYK
201: HLRASEAKKR PDVDYMERVQ KDVNSSMRGI LVDWLIEVSE EYRLVPETLY LTVNYIDRYL SGNVISRQKL QLLGVACMMI AAKYEEICAP QVEEFCYITD
301: NTYLKDEVLD MESDVLNYLK FEMTAPTTKC FLRRFVRAAH GVHEAPLMQL ECMANYIAEL SLLEYTMLSH SPSLVAASAI FLAKYILDPT RRPWNSTLQH
401: YTQYKAMELR GCVKDLQRLC STAHGSTLPA VREKYSQHKY KFVAKKFCPS VIPQEFFNNS
Arabidopsis Description
CYCA1-1CYCA1 [Source:UniProtKB/TrEMBL;Acc:A0A178W0H5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.