Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G17620.1 | CDX87588 | AT1G76540.1 | 12857813 |
| AT2G17620.1 | CDX88294 | AT1G76540.1 | 12857813 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024504.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDY07838 | Canola | nucleus | 96.66 | 96.89 |
| CDY30357 | Canola | nucleus | 81.86 | 83.86 |
| CDY26816 | Canola | nucleus | 80.91 | 83.29 |
| AT2G17620.1 | Thale cress | nucleus | 84.49 | 82.52 |
| CDX72551 | Canola | nucleus | 69.93 | 73.07 |
| CDY67210 | Canola | nucleus | 69.93 | 72.17 |
| CDY31481 | Canola | nucleus | 33.65 | 64.98 |
| KRH28901 | Soybean | nucleus | 61.81 | 59.82 |
| KRH76553 | Soybean | nucleus | 61.58 | 59.72 |
| PGSC0003DMT400093973 | Potato | nucleus | 43.91 | 55.76 |
| CDX85942 | Canola | nucleus | 53.94 | 55.39 |
| Solyc02g061650.1.1 | Tomato | nucleus | 46.3 | 55.27 |
| GSMUA_Achr5P19270_001 | Banana | cytosol | 28.16 | 54.38 |
| CDX68105 | Canola | nucleus | 51.07 | 54.18 |
| CDY33634 | Canola | nucleus | 52.03 | 53.43 |
| CDX96631 | Canola | nucleus | 52.27 | 53.41 |
| CDX88261 | Canola | nucleus | 54.42 | 53.02 |
| CDX87612 | Canola | nucleus | 54.42 | 52.9 |
| GSMUA_Achr11P... | Banana | nucleus | 51.07 | 52.45 |
| CDY29520 | Canola | nucleus | 51.07 | 52.2 |
| GSMUA_Achr8P13320_001 | Banana | nucleus | 51.79 | 51.67 |
| Os06t0726800-01 | Rice | nucleus | 50.84 | 50.84 |
| TraesCS2B01G422800.1 | Wheat | nucleus | 49.16 | 50.37 |
| HORVU0Hr1G022770.1 | Barley | nucleus, plastid | 33.41 | 50.36 |
| KXG20945 | Sorghum | nucleus | 50.84 | 50.24 |
| GSMUA_Achr5P19110_001 | Banana | nucleus | 50.84 | 50.24 |
| TraesCS2A01G404800.1 | Wheat | nucleus | 48.45 | 50.12 |
| Os04t0563700-01 | Rice | mitochondrion | 50.12 | 50.0 |
| Zm00001d026129_P001 | Maize | nucleus | 49.88 | 49.06 |
| Zm00001d036360_P002 | Maize | nucleus | 49.64 | 49.06 |
| HORVU7Hr1G121820.6 | Barley | nucleus | 49.16 | 49.05 |
| TraesCS2D01G401700.1 | Wheat | nucleus, plastid | 48.93 | 48.69 |
| TraesCS7D01G536000.1 | Wheat | nucleus | 48.69 | 48.69 |
| TraesCS7B01G472800.1 | Wheat | nucleus | 48.69 | 48.69 |
| EES12664 | Sorghum | nucleus | 50.12 | 48.61 |
| TraesCS7A01G549500.1 | Wheat | nucleus | 48.45 | 48.45 |
| Zm00001d002662_P010 | Maize | nucleus | 48.45 | 44.62 |
| HORVU2Hr1G096070.2 | Barley | nucleus | 47.97 | 42.68 |
| CDY62475 | Canola | nucleus | 33.65 | 40.17 |
| CDY69551 | Canola | nucleus | 33.89 | 40.0 |
| CDY11354 | Canola | plastid | 38.9 | 37.64 |
| CDY06752 | Canola | nucleus | 25.54 | 37.54 |
| CDX80988 | Canola | plastid | 37.95 | 37.15 |
| CDX69311 | Canola | nucleus | 34.37 | 34.37 |
| CDX75659 | Canola | nucleus | 34.61 | 33.88 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, vacuole | 53.94 | 33.83 |
| CDY17037 | Canola | nucleus, plastid | 28.88 | 33.24 |
| CDY17091 | Canola | nucleus | 28.4 | 33.24 |
| CDY47596 | Canola | nucleus | 28.64 | 33.06 |
| CDY17039 | Canola | nucleus | 28.64 | 33.06 |
| CDY23653 | Canola | nucleus | 28.16 | 33.05 |
| CDY06757 | Canola | nucleus, plastid | 28.4 | 32.78 |
| CDY47595 | Canola | nucleus, plastid | 28.88 | 32.61 |
| CDY66770 | Canola | nucleus | 28.16 | 32.6 |
| CDY22369 | Canola | nucleus | 26.73 | 31.91 |
| CDX88368 | Canola | plastid | 28.88 | 31.84 |
| CDX87520 | Canola | nucleus | 28.4 | 30.83 |
| CDY41784 | Canola | plastid | 24.82 | 30.59 |
| CDY48212 | Canola | nucleus | 27.21 | 30.24 |
| CDY53304 | Canola | plastid | 29.36 | 30.07 |
| CDY61993 | Canola | nucleus | 26.73 | 29.71 |
| CDY62408 | Canola | nucleus, plasma membrane, plastid | 14.8 | 29.38 |
| CDX85466 | Canola | plastid | 29.59 | 29.38 |
| CDY02719 | Canola | plastid | 29.59 | 28.9 |
| CDX97090 | Canola | nucleus | 29.83 | 28.67 |
| CDX69768 | Canola | nucleus, plastid | 29.59 | 28.38 |
| CDX81722 | Canola | nucleus, plastid | 27.21 | 28.29 |
| CDX87087 | Canola | plastid | 27.68 | 27.82 |
| CDY36574 | Canola | mitochondrion, nucleus | 28.88 | 27.75 |
| CDX96836 | Canola | nucleus, plastid | 29.12 | 27.73 |
| CDX79389 | Canola | plastid | 28.16 | 27.25 |
| CDY66415 | Canola | nucleus | 28.16 | 27.19 |
| CDX67944 | Canola | plastid | 27.92 | 27.08 |
| CDX92090 | Canola | mitochondrion, nucleus | 22.91 | 26.89 |
| CDY65994 | Canola | plastid | 27.92 | 26.41 |
| CDY25649 | Canola | plastid | 27.21 | 26.09 |
| CDY38664 | Canola | nucleus, plastid | 28.16 | 25.93 |
| CDY39984 | Canola | plastid | 27.45 | 25.67 |
| CDY37592 | Canola | mitochondrion, plastid | 27.45 | 25.16 |
| CDY14091 | Canola | plastid | 38.42 | 24.54 |
| CDX87305 | Canola | plastid | 26.97 | 24.46 |
| CDY33338 | Canola | nucleus | 31.98 | 22.95 |
| CDY04980 | Canola | nucleus | 38.19 | 22.28 |
| CDY35083 | Canola | cytosol, endoplasmic reticulum, nucleus | 31.5 | 21.67 |
| CDX96819 | Canola | nucleus | 33.17 | 21.55 |
| CDX83953 | Canola | nucleus | 33.17 | 21.22 |
| CDY19803 | Canola | golgi, nucleus, plasma membrane, plastid | 27.68 | 11.73 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.2 | UniProt:A0A078GVK4 | EnsemblPlants:CDY29184 | ProteinID:CDY29184 | ProteinID:CDY29184.1 |
| InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSBRNA2T00042084001 | PFAM:PF00134 | PFAM:PF02984 | PIRSF:PIRSF001771 |
| ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF336 | SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 |
| UniParc:UPI000253F00A | SEG:seg | : | : | : | : |
Description
BnaA06g25730DBnaA06g25730D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GVK4]
Coordinates
chrLK032233:+:86259..88513
Molecular Weight (calculated)
48151.2 Da
IEP (calculated)
5.097
GRAVY (calculated)
-0.297
Length
419 amino acids
Sequence
(BLAST)
(BLAST)
001: MVNSCENNNN IVVEPTKTMI LQDETRSRKV GQEMKRRVLG EINQNLVGAR GYPCVVNKRG YLSKQEEGCQ KKKPDPLRSS ITRSRVAEPL CQDEEEKKKL
101: KPTVPSADDE EEATLDQPVP MSLEKPYTEA DDPMEEVEME DVIVEEEPIL DIDVSDAKNS LAAVEYVQDL YAFHREMERF SCVPVDYMMQ QIDLNERMRA
201: ILIDWLIEVH DKFDLMSETL FLTVNLIDRF LSKKAVLRKK LQLVGLVALL LACKYEEVSV PLVEDLVLIS DRAYTRTDVL HMEKTMLSTL QFNVSLPTQY
301: PFLRRFLKAA QADKKCEVLA SFLMELALVE YEMLRFPPSL LAATAVYTAQ CTLDGFRKWN TTCEFHSHYS EDQLMECCRK MVSLHQRAAT GKLTGVYRKY
401: STFKFGYIAK SEAAHFLVS
101: KPTVPSADDE EEATLDQPVP MSLEKPYTEA DDPMEEVEME DVIVEEEPIL DIDVSDAKNS LAAVEYVQDL YAFHREMERF SCVPVDYMMQ QIDLNERMRA
201: ILIDWLIEVH DKFDLMSETL FLTVNLIDRF LSKKAVLRKK LQLVGLVALL LACKYEEVSV PLVEDLVLIS DRAYTRTDVL HMEKTMLSTL QFNVSLPTQY
301: PFLRRFLKAA QADKKCEVLA SFLMELALVE YEMLRFPPSL LAATAVYTAQ CTLDGFRKWN TTCEFHSHYS EDQLMECCRK MVSLHQRAAT GKLTGVYRKY
401: STFKFGYIAK SEAAHFLVS
001: MVNSCENKIF VKPTSTTILQ DETRSRKFGQ EMKREKRRVL RVINQNLAGA RVYPCVVNKR GSLLSNKQEE EEGCQKKKFD SLRPSVTRSG VEEETNKKLK
101: PSVPSANDFG DCIFIDEEEA TLDLPMPMSL EKPYIEADPM EEVEMEDVTV EEPIVDIDVL DSKNSLAAVE YVQDLYAFYR TMERFSCVPV DYMMQQIDLN
201: EKMRAILIDW LIEVHDKFDL INETLFLTVN LIDRFLSKQN VMRKKLQLVG LVALLLACKY EEVSVPVVED LVLISDKAYT RNDVLEMEKT MLSTLQFNIS
301: LPTQYPFLKR FLKAAQADKK CEVLASFLIE LALVEYEMLR FPPSLLAATS VYTAQCTLDG SRKWNSTCEF HCHYSEDQLM ECSRKLVSLH QRAATGNLTG
401: VYRKYSTSKF GYIAKCEAAH FLVSESHHS
101: PSVPSANDFG DCIFIDEEEA TLDLPMPMSL EKPYIEADPM EEVEMEDVTV EEPIVDIDVL DSKNSLAAVE YVQDLYAFYR TMERFSCVPV DYMMQQIDLN
201: EKMRAILIDW LIEVHDKFDL INETLFLTVN LIDRFLSKQN VMRKKLQLVG LVALLLACKY EEVSVPVVED LVLISDKAYT RNDVLEMEKT MLSTLQFNIS
301: LPTQYPFLKR FLKAAQADKK CEVLASFLIE LALVEYEMLR FPPSLLAATS VYTAQCTLDG SRKWNSTCEF HCHYSEDQLM ECSRKLVSLH QRAATGNLTG
401: VYRKYSTSKF GYIAKCEAAH FLVSESHHS
Arabidopsis Description
CYCB2-1Cyclin-B2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q39068]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.