Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | nucleus | 75.0 | 77.21 |
| GSMUA_Achr5P19270_001 | Banana | cytosol | 38.57 | 74.65 |
| GSMUA_Achr5P19110_001 | Banana | nucleus | 75.24 | 74.53 |
| PGSC0003DMT400075380 | Potato | nucleus | 40.48 | 71.73 |
| CDY31481 | Canola | nucleus | 35.95 | 69.59 |
| Os06t0726800-01 | Rice | nucleus | 60.48 | 60.62 |
| KRH28901 | Soybean | nucleus | 61.19 | 59.35 |
| KRH76553 | Soybean | nucleus | 60.95 | 59.26 |
| Solyc04g082430.2.1 | Tomato | nucleus | 55.24 | 59.03 |
| VIT_18s0001g14170.t01 | Wine grape | nucleus | 61.19 | 58.28 |
| HORVU7Hr1G121820.6 | Barley | nucleus | 58.1 | 58.1 |
| Os04t0563700-01 | Rice | mitochondrion | 58.1 | 58.1 |
| TraesCS7B01G472800.1 | Wheat | nucleus | 57.86 | 58.0 |
| TraesCS7D01G536000.1 | Wheat | nucleus | 57.62 | 57.76 |
| KXG20945 | Sorghum | nucleus | 58.1 | 57.55 |
| TraesCS7A01G549500.1 | Wheat | nucleus | 57.38 | 57.52 |
| HORVU0Hr1G022770.1 | Barley | nucleus, plastid | 37.86 | 57.19 |
| VIT_03s0038g02800.t01 | Wine grape | nucleus, plastid | 57.62 | 57.08 |
| KRH60628 | Soybean | nucleus | 55.0 | 57.04 |
| Solyc03g032190.2.1 | Tomato | nucleus | 58.1 | 56.61 |
| PGSC0003DMT400048062 | Potato | nucleus | 58.1 | 56.61 |
| Zm00001d036360_P002 | Maize | nucleus | 57.14 | 56.6 |
| TraesCS2A01G404800.1 | Wheat | nucleus | 54.52 | 56.54 |
| PGSC0003DMT400025854 | Potato | nucleus | 59.29 | 56.46 |
| KRH51329 | Soybean | nucleus, plastid | 55.24 | 55.9 |
| CDX85942 | Canola | nucleus | 54.05 | 55.64 |
| Bra003727.1-P | Field mustard | nucleus | 50.71 | 55.61 |
| TraesCS2B01G422800.1 | Wheat | nucleus | 54.05 | 55.5 |
| Zm00001d026129_P001 | Maize | nucleus | 56.19 | 55.4 |
| EES12664 | Sorghum | nucleus | 56.9 | 55.32 |
| Bra016460.1-P | Field mustard | nucleus | 53.81 | 55.12 |
| CDY33634 | Canola | nucleus | 53.1 | 54.66 |
| CDX96631 | Canola | nucleus | 53.33 | 54.63 |
| Bra025831.1-P | Field mustard | nucleus | 53.1 | 54.39 |
| PGSC0003DMT400093973 | Potato | nucleus | 42.62 | 54.24 |
| Solyc02g082820.2.1 | Tomato | nucleus | 55.95 | 54.15 |
| PGSC0003DMT400003868 | Potato | nucleus | 55.71 | 54.04 |
| TraesCS2D01G401700.1 | Wheat | nucleus, plastid | 54.05 | 53.92 |
| AT1G20610.1 | Thale cress | nucleus | 55.0 | 53.85 |
| CDX68105 | Canola | nucleus | 50.48 | 53.67 |
| Solyc12g094600.1.1 | Tomato | nucleus | 54.29 | 53.65 |
| CDY29520 | Canola | nucleus | 52.14 | 53.41 |
| Bra015762.1-P | Field mustard | nucleus | 54.76 | 53.36 |
| CDX88261 | Canola | nucleus | 54.52 | 53.26 |
| CDX87612 | Canola | nucleus | 54.52 | 53.13 |
| AT1G20590.1 | Thale cress | cytosol, golgi, nucleus, plastid | 33.33 | 52.83 |
| AT1G76310.3 | Thale cress | nucleus | 56.9 | 52.07 |
| Solyc02g061650.1.1 | Tomato | nucleus | 43.33 | 51.85 |
| Bra024504.1-P | Field mustard | nucleus | 51.67 | 51.79 |
| CDY29184 | Canola | nucleus | 51.67 | 51.79 |
| CDY26816 | Canola | nucleus | 50.0 | 51.6 |
| CDY07838 | Canola | nucleus | 51.19 | 51.44 |
| Zm00001d002662_P010 | Maize | nucleus | 55.71 | 51.43 |
| CDX72551 | Canola | nucleus | 49.05 | 51.37 |
| CDY67210 | Canola | nucleus | 49.52 | 51.23 |
| Bra017726.1-P | Field mustard | nucleus | 49.52 | 51.23 |
| CDY30357 | Canola | nucleus | 49.52 | 50.86 |
| Bra037265.1-P | Field mustard | nucleus | 49.29 | 50.61 |
| AT2G17620.1 | Thale cress | nucleus | 51.67 | 50.58 |
| AT4G35620.1 | Thale cress | nucleus | 51.43 | 50.35 |
| HORVU2Hr1G096070.2 | Barley | nucleus | 54.29 | 48.41 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, vacuole | 70.48 | 44.31 |
| GSMUA_AchrUn_... | Banana | nucleus | 28.81 | 40.6 |
| GSMUA_Achr4P10090_001 | Banana | nucleus | 38.81 | 38.35 |
| GSMUA_Achr10P... | Banana | nucleus | 39.05 | 36.2 |
| GSMUA_Achr7P21380_001 | Banana | nucleus | 39.05 | 35.89 |
| GSMUA_Achr8P23970_001 | Banana | nucleus | 37.14 | 35.86 |
| GSMUA_Achr3P24980_001 | Banana | nucleus | 34.05 | 35.57 |
| GSMUA_Achr1P14000_001 | Banana | nucleus, plasma membrane, plastid | 19.05 | 32.39 |
| GSMUA_Achr10P... | Banana | nucleus | 23.81 | 31.55 |
| GSMUA_Achr2P21530_001 | Banana | cytosol, nucleus, plastid | 20.95 | 30.77 |
| GSMUA_Achr6P11130_001 | Banana | nucleus | 25.24 | 27.11 |
| GSMUA_Achr2P21520_001 | Banana | nucleus | 22.62 | 26.39 |
| GSMUA_Achr5P06960_001 | Banana | nucleus, plastid | 27.38 | 23.0 |
| GSMUA_Achr2P19220_001 | Banana | nucleus, plastid | 26.9 | 22.51 |
| GSMUA_Achr3P25340_001 | Banana | nucleus | 26.19 | 20.3 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.2 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | EnsemblPlantsGene:GSMUA_Achr8G13320_001 | EnsemblPlants:GSMUA_Achr8P13320_001 |
| EnsemblPlants:GSMUA_Achr8T13320_001 | UniProt:M0TQ35 | PFAM:PF00134 | PFAM:PF02984 | PIRSF:PIRSF001771 | ScanProsite:PS00292 |
| PANTHER:PTHR10177 | PANTHER:PTHR10177:SF350 | SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 | UniParc:UPI0002956633 |
| SEG:seg | : | : | : | : | : |
Description
Cyclin-B2-2 [Source:GMGC_GENE;Acc:GSMUA_Achr8G13320_001]
Coordinates
chr8:-:10090027..10092682
Molecular Weight (calculated)
47699.8 Da
IEP (calculated)
6.094
GRAVY (calculated)
-0.127
Length
420 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRVDENGRG MTRPASFRGS LGLTDTGNRR ALRDIRNVVG APPYACPIGK RGFPDKGSLD DKKLTLVARR PATRKFVATL ASKSQPYQQS QYNPPVPLVS
101: KSSCLDSCTT IDVDYNSSND IALPMVEEMD NSDIKEVAMD DLVIETLPSI DICDSNNPLA VVEYVEDIYS FYRQTEVTSC VSPDYMSQQF DINEKMRAIL
201: IDWLIEVHYK FELMEETLFL TVNIIDRFLA RQTVARKKLQ LAGVTAMLLA CKYEEVSVPV VEDLILISDR AYTREEVLEM EKLIVNTLQF NMSVPTPYVF
301: MRRFLKAAEA DRKLELLSFF IIELCLVEYK MLKFRPSLLA AAAIYTAQCS LRGLKYWTKT SELHSNYSED QLLECSRLMV DFHHKAGLGK LTGVHRKYTT
401: LKYGCTAKSE PALFLLNTIL
101: KSSCLDSCTT IDVDYNSSND IALPMVEEMD NSDIKEVAMD DLVIETLPSI DICDSNNPLA VVEYVEDIYS FYRQTEVTSC VSPDYMSQQF DINEKMRAIL
201: IDWLIEVHYK FELMEETLFL TVNIIDRFLA RQTVARKKLQ LAGVTAMLLA CKYEEVSVPV VEDLILISDR AYTREEVLEM EKLIVNTLQF NMSVPTPYVF
301: MRRFLKAAEA DRKLELLSFF IIELCLVEYK MLKFRPSLLA AAAIYTAQCS LRGLKYWTKT SELHSNYSED QLLECSRLMV DFHHKAGLGK LTGVHRKYTT
401: LKYGCTAKSE PALFLLNTIL
001: MGGSDENRHG VIGPMNRQQG GLRGGKVIPT NGQTRRALSN INKNIIGAPV YPCAVKRPFT EKNGICNKKI PPVPVHRPVT RKFAAQLAEN NLQIHKEETK
101: KPDLISNEAL DRIITDVEEG DFNEPMFVQH TEAMLEEIDK MEGIEMQDSN DIDAEVEESV MDIDSCDKNN PLSVVEYIND IYCFYKKNEC RSCVPPNYME
201: NQHDINERMR GILFDWLIEV HYKFELMEET LYLTINLIDR FLAVHQHIAR KKLQLVGVTA MLLACKYEEV SVPVVDDLIL ISDKAYTRTE ILDMEKLMAN
301: TLQFNFCLPT PYVFMRRFLK AAQSDKKLEL LSFFMIELCL VEYEMLQYTP SQLAASAIYT AQSTLKGYED WSKTSEFHSG YTEEALLECS RKMVGLHHKA
401: GTGKLTGVHR KYNTSKFGYA ARIEPAGFLL L
101: KPDLISNEAL DRIITDVEEG DFNEPMFVQH TEAMLEEIDK MEGIEMQDSN DIDAEVEESV MDIDSCDKNN PLSVVEYIND IYCFYKKNEC RSCVPPNYME
201: NQHDINERMR GILFDWLIEV HYKFELMEET LYLTINLIDR FLAVHQHIAR KKLQLVGVTA MLLACKYEEV SVPVVDDLIL ISDKAYTRTE ILDMEKLMAN
301: TLQFNFCLPT PYVFMRRFLK AAQSDKKLEL LSFFMIELCL VEYEMLQYTP SQLAASAIYT AQSTLKGYED WSKTSEFHSG YTEEALLECS RKMVGLHHKA
401: GTGKLTGVHR KYNTSKFGYA ARIEPAGFLL L
Arabidopsis Description
CYCB2;4CYCLIN B2;4 [Source:TAIR;Acc:AT1G76310]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.