Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | nucleus | 77.68 | 78.37 |
| GSMUA_Achr4P10090_001 | Banana | nucleus | 71.99 | 77.41 |
| GSMUA_Achr8P23970_001 | Banana | nucleus | 71.77 | 75.4 |
| KRG95055 | Soybean | nucleus | 60.83 | 61.1 |
| VIT_08s0040g00930.t01 | Wine grape | nucleus | 59.52 | 60.04 |
| KRH66713 | Soybean | nucleus | 59.3 | 59.69 |
| GSMUA_Achr3P24980_001 | Banana | nucleus | 51.64 | 58.71 |
| PGSC0003DMT400058457 | Potato | nucleus | 53.61 | 58.61 |
| Solyc10g078330.1.1 | Tomato | nucleus | 53.61 | 57.92 |
| Solyc01g009040.2.1 | Tomato | nucleus | 54.7 | 57.47 |
| KRH66715 | Soybean | nucleus | 49.23 | 57.4 |
| PGSC0003DMT400018480 | Potato | nucleus | 52.95 | 56.94 |
| Solyc10g080950.1.1 | Tomato | nucleus | 57.55 | 56.93 |
| VIT_13s0067g01420.t01 | Wine grape | nucleus | 57.11 | 56.49 |
| PGSC0003DMT400072211 | Potato | nucleus | 57.11 | 56.25 |
| GSMUA_AchrUn_... | Banana | nucleus | 36.54 | 56.04 |
| KRH66720 | Soybean | endoplasmic reticulum, vacuole | 24.29 | 55.78 |
| AT3G11520.1 | Thale cress | nucleus | 49.45 | 54.59 |
| VIT_06s0009g02090.t01 | Wine grape | nucleus | 49.89 | 54.55 |
| CDY69551 | Canola | nucleus | 42.01 | 54.08 |
| PGSC0003DMT400015245 | Potato | nucleus | 51.86 | 53.99 |
| Bra028741.1-P | Field mustard | nucleus | 49.02 | 53.98 |
| KRH73516 | Soybean | nucleus | 51.86 | 53.86 |
| CDY62475 | Canola | nucleus | 41.14 | 53.56 |
| KRH14611 | Soybean | nucleus | 51.2 | 53.3 |
| Bra002046.1-P | Field mustard | nucleus | 45.73 | 53.18 |
| Solyc06g073610.2.1 | Tomato | nucleus | 50.55 | 52.5 |
| AT4G37490.1 | Thale cress | nucleus | 49.02 | 52.34 |
| KRH66718 | Soybean | plastid | 42.45 | 52.01 |
| Bra005880.1-P | Field mustard | nucleus, plastid | 46.83 | 51.69 |
| AT2G26760.1 | Thale cress | nucleus | 43.54 | 51.42 |
| CDX69311 | Canola | nucleus | 47.05 | 51.31 |
| CDY11354 | Canola | plastid | 48.14 | 50.81 |
| KRG95056 | Soybean | cytosol | 42.89 | 50.65 |
| CDX75659 | Canola | nucleus | 47.05 | 50.23 |
| Bra011769.1-P | Field mustard | nucleus | 47.05 | 50.23 |
| AT5G06150.1 | Thale cress | nucleus | 48.8 | 50.11 |
| CDX80988 | Canola | plastid | 46.61 | 49.77 |
| GSMUA_Achr5P19270_001 | Banana | cytosol | 23.19 | 48.85 |
| GSMUA_Achr5P19110_001 | Banana | nucleus | 36.98 | 39.86 |
| GSMUA_Achr11P... | Banana | nucleus | 35.23 | 39.46 |
| GSMUA_Achr8P13320_001 | Banana | nucleus | 35.89 | 39.05 |
| CDY14091 | Canola | plastid | 49.67 | 34.6 |
| GSMUA_Achr1P14000_001 | Banana | nucleus, plasma membrane, plastid | 17.94 | 33.2 |
| GSMUA_Achr2P21530_001 | Banana | cytosol, nucleus, plastid | 20.57 | 32.87 |
| GSMUA_Achr10P... | Banana | nucleus | 22.76 | 32.81 |
| CDY04980 | Canola | nucleus | 49.23 | 31.34 |
| AT1G34460.5 | Thale cress | cytosol | 34.14 | 31.33 |
| GSMUA_Achr6P11130_001 | Banana | nucleus | 25.16 | 29.41 |
| GSMUA_Achr2P21520_001 | Banana | nucleus | 21.44 | 27.22 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, vacuole | 37.64 | 25.75 |
| GSMUA_Achr5P06960_001 | Banana | nucleus, plastid | 26.91 | 24.6 |
| GSMUA_Achr2P19220_001 | Banana | nucleus, plastid | 26.91 | 24.5 |
| GSMUA_Achr3P25340_001 | Banana | nucleus | 26.04 | 21.96 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.2 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0016020 | GO:GO:0016021 |
| EnsemblPlantsGene:GSMUA_Achr7G21380_001 | EnsemblPlants:GSMUA_Achr7P21380_001 | EnsemblPlants:GSMUA_Achr7T21380_001 | UniProt:M0TJH5 | PFAM:PF00134 | PFAM:PF02984 |
| PIRSF:PIRSF001771 | ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF267 | SMART:SM00385 | SMART:SM01332 |
| SUPFAM:SSF47954 | TMHMM:TMhelix | UniParc:UPI00029489C9 | SEG:seg | : | : |
Description
Cyclin-B1-1 [Source:GMGC_GENE;Acc:GSMUA_Achr7G21380_001]
Coordinates
chr7:-:24166754..24169416
Molecular Weight (calculated)
50635.3 Da
IEP (calculated)
9.335
GRAVY (calculated)
-0.211
Length
457 amino acids
Sequence
(BLAST)
(BLAST)
001: MASRHQTVVP QQQRGGHVPG GKQKAGAAAD GKNRRALGDI GNLVHAQVVE GKPESQINRP ITRSFGAQLI ANAQAVAAAA AANKKPVAVK ANAAVARAGT
101: KPAKKVAVKG KEKKTEEVKV IVISPDKNQE VPKQAADTSR SRTKSTRKKV TTLTSVLTAR SKVACGLTDK PKELVDDIDA ADTEDELAVV DYIEDIYKFY
201: KSAEHHCRPH DYMDSQVEIN AKMRAILADW LIEVHHKFEL SPETLYLTFH IIDRYLSMET VLRRELQLVG VSAMLIASKY EEIWAPEVND FICISDRAYT
301: REQILGMEKA ILNKLEWNLT VPTPYVFLVR FLKAAACDQE VREQSFMERM VFFFAELAMM HYSMIMFCPS MVAAAAVHAA RCTLRKSPLW TATLKHHTGF
401: SEQQLLDCTQ MLVNSHAAAP EGKLKVVYKK YSSEQFGAVA LQPSAAKLVE ELKAASL
101: KPAKKVAVKG KEKKTEEVKV IVISPDKNQE VPKQAADTSR SRTKSTRKKV TTLTSVLTAR SKVACGLTDK PKELVDDIDA ADTEDELAVV DYIEDIYKFY
201: KSAEHHCRPH DYMDSQVEIN AKMRAILADW LIEVHHKFEL SPETLYLTFH IIDRYLSMET VLRRELQLVG VSAMLIASKY EEIWAPEVND FICISDRAYT
301: REQILGMEKA ILNKLEWNLT VPTPYVFLVR FLKAAACDQE VREQSFMERM VFFFAELAMM HYSMIMFCPS MVAAAAVHAA RCTLRKSPLW TATLKHHTGF
401: SEQQLLDCTQ MLVNSHAAAP EGKLKVVYKK YSSEQFGAVA LQPSAAKLVE ELKAASL
001: MATRANVPEQ VRGAPLVDGL KIQNKNGAVK SRRALGDIGN LVSVPGVQGG KAQPPINRPI TRSFRAQLLA NAQLERKPIN GDNKVPALGP KRQPLAARNP
101: EAQRAVQKKN LVVKQQTKPV EVIETKKEVT KKEVAMSPKN KKVTYSSVLS ARSKAACGIV NKPKIIDIDE SDKDNHLAAV EYVDDMYSFY KEVEKESQPK
201: MYMHIQTEMN EKMRAILIDW LLEVHIKFEL NLETLYLTVN IIDRFLSVKA VPKRELQLVG ISALLIASKY EEIWPPQVND LVYVTDNAYS SRQILVMEKA
301: ILGNLEWYLT VPTQYVFLVR FIKASMSDPE MENMVHFLAE LGMMHYDTLT FCPSMLAASA VYTARCSLNK SPAWTDTLQF HTGYTESEIM DCSKLLAFLH
401: SRCGESRLRA VYKKYSKAEN GGVAMVSPAK SLLSAAADWK KPVSS
101: EAQRAVQKKN LVVKQQTKPV EVIETKKEVT KKEVAMSPKN KKVTYSSVLS ARSKAACGIV NKPKIIDIDE SDKDNHLAAV EYVDDMYSFY KEVEKESQPK
201: MYMHIQTEMN EKMRAILIDW LLEVHIKFEL NLETLYLTVN IIDRFLSVKA VPKRELQLVG ISALLIASKY EEIWPPQVND LVYVTDNAYS SRQILVMEKA
301: ILGNLEWYLT VPTQYVFLVR FIKASMSDPE MENMVHFLAE LGMMHYDTLT FCPSMLAASA VYTARCSLNK SPAWTDTLQF HTGYTESEIM DCSKLLAFLH
401: SRCGESRLRA VYKKYSKAEN GGVAMVSPAK SLLSAAADWK KPVSS
Arabidopsis Description
CYCB1-2Cyclin-B1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q39067]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.