Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG95055 | Soybean | nucleus | 82.4 | 70.99 |
| KRH66713 | Soybean | nucleus | 79.59 | 68.72 |
| KRH66720 | Soybean | endoplasmic reticulum, vacuole | 33.93 | 66.83 |
| KRH66718 | Soybean | plastid | 59.95 | 63.0 |
| KRG95056 | Soybean | cytosol | 60.46 | 61.24 |
| VIT_08s0040g00930.t01 | Wine grape | nucleus | 61.73 | 53.42 |
| PGSC0003DMT400018480 | Potato | nucleus | 57.65 | 53.18 |
| Solyc10g078330.1.1 | Tomato | nucleus | 56.89 | 52.72 |
| CDY69551 | Canola | nucleus | 46.68 | 51.55 |
| Bra002046.1-P | Field mustard | nucleus | 51.28 | 51.15 |
| TraesCSU01G217300.1 | Wheat | cytosol | 28.06 | 50.93 |
| CDY62475 | Canola | nucleus | 45.41 | 50.71 |
| VIT_13s0067g01420.t01 | Wine grape | nucleus | 59.69 | 50.65 |
| Bra028741.1-P | Field mustard | nucleus | 53.32 | 50.36 |
| AT3G11520.1 | Thale cress | nucleus | 53.06 | 50.24 |
| Solyc10g080950.1.1 | Tomato | nucleus | 59.18 | 50.22 |
| Zm00001d019469_P001 | Maize | extracellular | 18.11 | 49.65 |
| PGSC0003DMT400072211 | Potato | nucleus | 58.67 | 49.57 |
| GSMUA_Achr7P21380_001 | Banana | nucleus | 57.4 | 49.23 |
| Bra005880.1-P | Field mustard | nucleus, plastid | 51.79 | 49.03 |
| KRH14611 | Soybean | nucleus | 54.85 | 48.97 |
| GSMUA_AchrUn_... | Banana | nucleus | 36.99 | 48.66 |
| CDX69311 | Canola | nucleus | 51.02 | 47.73 |
| CDX80988 | Canola | plastid | 52.04 | 47.66 |
| CDY11354 | Canola | plastid | 52.55 | 47.58 |
| GSMUA_Achr4P10090_001 | Banana | nucleus | 51.53 | 47.53 |
| KRH73516 | Soybean | nucleus | 53.32 | 47.5 |
| HORVU0Hr1G001680.1 | Barley | nucleus | 38.78 | 47.5 |
| KXG24389 | Sorghum | nucleus | 30.36 | 47.22 |
| AT5G06150.1 | Thale cress | nucleus | 53.57 | 47.19 |
| AT4G37490.1 | Thale cress | nucleus | 51.28 | 46.96 |
| Bra011769.1-P | Field mustard | nucleus | 50.77 | 46.5 |
| CDX75659 | Canola | nucleus | 50.77 | 46.5 |
| GSMUA_Achr10P... | Banana | nucleus | 53.32 | 46.14 |
| GSMUA_Achr8P23970_001 | Banana | nucleus | 50.77 | 45.75 |
| HORVU1Hr1G068080.1 | Barley | plastid | 39.8 | 45.61 |
| HORVU1Hr1G068010.7 | Barley | mitochondrion, nucleus | 47.19 | 44.05 |
| EES03772 | Sorghum | nucleus, plastid | 49.49 | 43.21 |
| Zm00001d012560_P002 | Maize | nucleus, plastid | 49.23 | 42.98 |
| HORVU0Hr1G001690.16 | Barley | nucleus, peroxisome | 47.96 | 42.92 |
| TraesCS1D01G309300.1 | Wheat | nucleus, plastid | 47.7 | 42.89 |
| TraesCS1A01G309800.1 | Wheat | nucleus | 47.19 | 42.43 |
| TraesCS1B01G320900.1 | Wheat | nucleus, plastid | 47.19 | 42.43 |
| TraesCS1D01G309400.1 | Wheat | nucleus | 46.94 | 42.11 |
| TraesCS3D01G326600.1 | Wheat | nucleus | 48.72 | 41.98 |
| TraesCS1B01G321000.1 | Wheat | nucleus | 46.68 | 41.97 |
| HORVU3Hr1G078880.2 | Barley | nucleus | 48.47 | 41.94 |
| TraesCS3A01G333000.2 | Wheat | nucleus | 48.98 | 41.74 |
| Os01t0281200-01 | Rice | nucleus | 44.9 | 41.61 |
| GSMUA_Achr3P24980_001 | Banana | nucleus | 42.6 | 41.54 |
| TraesCS3B01G363200.3 | Wheat | nucleus | 48.72 | 41.43 |
| HORVU1Hr1G068160.2 | Barley | nucleus, plastid | 46.43 | 41.08 |
| HORVU0Hr1G026010.1 | Barley | nucleus, plastid | 46.43 | 41.08 |
| TraesCS3D01G195200.1 | Wheat | plastid | 43.11 | 40.92 |
| TraesCS3A01G192100.1 | Wheat | nucleus, plastid | 42.6 | 40.34 |
| Zm00001d043164_P002 | Maize | nucleus | 48.98 | 39.67 |
| Zm00001d010656_P001 | Maize | nucleus | 44.39 | 39.01 |
| EES18429 | Sorghum | mitochondrion | 44.9 | 38.26 |
| EES02793 | Sorghum | nucleus | 43.88 | 37.15 |
| Os05t0493500-00 | Rice | nucleus | 45.41 | 36.55 |
| Zm00001d008221_P001 | Maize | nucleus | 44.13 | 36.12 |
| TraesCS7A01G229300.1 | Wheat | endoplasmic reticulum | 29.08 | 34.65 |
| KRH76553 | Soybean | nucleus | 38.01 | 34.49 |
| KRH28901 | Soybean | nucleus | 38.01 | 34.41 |
| Os02t0627800-00 | Rice | cytosol, mitochondrion, peroxisome | 33.93 | 33.59 |
| KRH51329 | Soybean | nucleus, plastid | 35.2 | 33.25 |
| HORVU3Hr1G040990.2 | Barley | nucleus, plastid | 41.33 | 32.93 |
| KRH60628 | Soybean | nucleus | 33.93 | 32.84 |
| KRH52056 | Soybean | nucleus | 17.6 | 32.7 |
| CDY14091 | Canola | plastid | 53.32 | 31.86 |
| Zm00001d020033_P001 | Maize | nucleus | 43.37 | 31.25 |
| Zm00001d020996_P001 | Maize | nucleus | 43.11 | 31.07 |
| CDY04980 | Canola | nucleus | 53.83 | 29.39 |
| KRH61375 | Soybean | nucleus | 24.23 | 29.05 |
| AT1G34460.5 | Thale cress | cytosol | 36.22 | 28.51 |
| KRH61371 | Soybean | nucleus | 23.98 | 26.93 |
| KRH15427 | Soybean | nucleus, plastid | 25.0 | 26.92 |
| KRH05614 | Soybean | nucleus | 25.0 | 26.7 |
| KRH52055 | Soybean | nucleus | 24.23 | 26.54 |
| KRH61369 | Soybean | nucleus | 20.92 | 25.08 |
| KRH05060 | Soybean | nucleus | 29.08 | 24.84 |
| KRH61373 | Soybean | nucleus, plastid | 23.72 | 24.8 |
| KRH16044 | Soybean | nucleus | 29.08 | 24.73 |
| KRH53279 | Soybean | plastid | 28.32 | 23.12 |
| KRH17986 | Soybean | plastid | 29.59 | 23.06 |
| KRH64625 | Soybean | plastid | 28.32 | 22.93 |
| KRH52524 | Soybean | nucleus | 27.3 | 22.81 |
| KRH47513 | Soybean | nucleus | 27.55 | 22.69 |
| KRH61850 | Soybean | nucleus | 28.06 | 22.54 |
| KRH44391 | Soybean | nucleus | 26.53 | 22.08 |
| KRH16410 | Soybean | plastid | 27.81 | 21.63 |
| KRH44849 | Soybean | nucleus | 35.71 | 18.89 |
Protein Annotations
| Gene3D:1.10.472.10 | EntrezGene:100789141 | MapMan:13.1.1.1.2 | UniProt:A0A0R0KPM5 | EMBL:ACUP02002006 | InterPro:Cyclin-like |
| InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N | EnsemblPlantsGene:GLYMA_03G123800 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | EnsemblPlants:KRH66715 | ProteinID:KRH66715 | ProteinID:KRH66715.1 | PFAM:PF00134 |
| PFAM:PF02984 | PIRSF:PIRSF001771 | ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF267 | SMART:SM00385 |
| SMART:SM01332 | SUPFAM:SSF47954 | UniParc:UPI00023378A9 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr3:-:33656023..33658606
Molecular Weight (calculated)
43958.1 Da
IEP (calculated)
6.725
GRAVY (calculated)
-0.242
Length
392 amino acids
Sequence
(BLAST)
(BLAST)
001: MASRGEAVVW GGKQQKKKKG IAVGRNRKIL GDIGNLVNRP ITRSFSAQIL AKVQAAAKNN KKQASVKVKP KAEEVIDIEA GPDKEVQKNK NKESRASTSV
101: LTARSNAACD ITNKPREQII DIDASDSDNE LAAVEYIDDI CKFYKLVENE NHPHDYIDSQ PEIDQRSRAI LVNWLIDVHT NLDLSLETIY LTINIIDRFL
201: AVKTVPRLEM QLVGISAMLM ASKYEEIWTL EVDELVRLTD YTHEQVLVME KTILNKLEWN LTVPTTFVFL VRFIKASVPD QELENMAHFL SELGMMHYAT
301: LKYFPSMVAA SAVFAARCTL NKAPLWTETL KLHTGYSQGQ LMDCARLLVS FHSMAGNGEE KVVYIKYSDP EKGAVAMLPP AKNLMPEGSD SQ
101: LTARSNAACD ITNKPREQII DIDASDSDNE LAAVEYIDDI CKFYKLVENE NHPHDYIDSQ PEIDQRSRAI LVNWLIDVHT NLDLSLETIY LTINIIDRFL
201: AVKTVPRLEM QLVGISAMLM ASKYEEIWTL EVDELVRLTD YTHEQVLVME KTILNKLEWN LTVPTTFVFL VRFIKASVPD QELENMAHFL SELGMMHYAT
301: LKYFPSMVAA SAVFAARCTL NKAPLWTETL KLHTGYSQGQ LMDCARLLVS FHSMAGNGEE KVVYIKYSDP EKGAVAMLPP AKNLMPEGSD SQ
001: MATRANVPEQ VRGAPLVDGL KIQNKNGAVK SRRALGDIGN LVSVPGVQGG KAQPPINRPI TRSFRAQLLA NAQLERKPIN GDNKVPALGP KRQPLAARNP
101: EAQRAVQKKN LVVKQQTKPV EVIETKKEVT KKEVAMSPKN KKVTYSSVLS ARSKAACGIV NKPKIIDIDE SDKDNHLAAV EYVDDMYSFY KEVEKESQPK
201: MYMHIQTEMN EKMRAILIDW LLEVHIKFEL NLETLYLTVN IIDRFLSVKA VPKRELQLVG ISALLIASKY EEIWPPQVND LVYVTDNAYS SRQILVMEKA
301: ILGNLEWYLT VPTQYVFLVR FIKASMSDPE MENMVHFLAE LGMMHYDTLT FCPSMLAASA VYTARCSLNK SPAWTDTLQF HTGYTESEIM DCSKLLAFLH
401: SRCGESRLRA VYKKYSKAEN GGVAMVSPAK SLLSAAADWK KPVSS
101: EAQRAVQKKN LVVKQQTKPV EVIETKKEVT KKEVAMSPKN KKVTYSSVLS ARSKAACGIV NKPKIIDIDE SDKDNHLAAV EYVDDMYSFY KEVEKESQPK
201: MYMHIQTEMN EKMRAILIDW LLEVHIKFEL NLETLYLTVN IIDRFLSVKA VPKRELQLVG ISALLIASKY EEIWPPQVND LVYVTDNAYS SRQILVMEKA
301: ILGNLEWYLT VPTQYVFLVR FIKASMSDPE MENMVHFLAE LGMMHYDTLT FCPSMLAASA VYTARCSLNK SPAWTDTLQF HTGYTESEIM DCSKLLAFLH
401: SRCGESRLRA VYKKYSKAEN GGVAMVSPAK SLLSAAADWK KPVSS
Arabidopsis Description
CYCB1-2Cyclin-B1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q39067]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.