CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 3
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89142
KRG89488
KRG91493
KRG93108
KRG95411
KRG97131
KRG97770
KRH03906
KRH03927
KRH05109
KRH05913
KRH06014
KRH11866
KRH16010
KRH17396
KRH17547
KRH24189
KRH25124
KRH29160
KRH30104
KRH30550
KRH31114
KRH35335
KRH36887
KRH37522
KRH40855
KRH41754
KRH42252
KRH47306
KRH48128
KRH48644
KRH51734
KRH52488
KRH52489
KRH56424
KRH57185
KRH57190
KRH57211
KRH58370
KRH60454
KRH61066
KRH62487
KRH62794
KRH67085
KRH68880

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G11520.1	KRG93108	AT1G05805.1	20706207
AT3G11520.1	KRH03927	AT1G56110.1	20706207
AT3G11520.1	KRH48644	AT1G56110.1	20706207
AT3G11520.1	KRH57211	AT1G56110.1	20706207
AT3G11520.1	KRG97131	AT3G61650.1	20706207
AT3G11520.1	KRH68880	AT3G61650.1	20706207
AT3G11520.1	KRG91493	AT4G25550.1	20706207
AT3G11520.1	KRH35335	AT4G25550.1	20706207
AT3G11520.1	KRH05913	AT4G38900.1	20706207
AT3G11520.1	KRH17396	AT4G38900.1	20706207
AT3G11520.1	KRH51734	AT4G38900.1	20706207
AT3G11520.1	KRH61066	AT4G38900.1	20706207
AT3G11520.1	KRG95411	AT5G06680.1	20706207
AT3G11520.1	KRH67085	AT5G06680.1	20706207
AT4G37490.1	KRH06014	AT1G20930.1	20706207
AT4G37490.1	KRH17547	AT1G20930.1	20706207
AT4G37490.1	KRH37522	AT1G20930.1	20706207
AT4G37490.1	KRH48128	AT1G20930.1	20706207
AT4G37490.1	KRH06014	AT1G76540.1	20706207
AT4G37490.1	KRH17547	AT1G76540.1	20706207
AT4G37490.1	KRH37522	AT1G76540.1	20706207
AT4G37490.1	KRH48128	AT1G76540.1	20706207
AT4G37490.1	KRH11866	AT3G48750.1	12065421
AT4G37490.1	KRH36887	AT3G48750.1	12065421
AT4G37490.1	KRH42252	AT3G48750.1	12065421
AT4G37490.1	KRH58370	AT3G48750.1	12065421
AT4G37490.1	KRH47306	AT3G54180.1	12065421
AT5G06150.1	KRH41754	AT1G04810.1	20706207
AT5G06150.1	KRH60454	AT1G04810.1	20706207
AT5G06150.1	KRH06014	AT1G20930.1	20706207
AT5G06150.1	KRH17547	AT1G20930.1	20706207
AT5G06150.1	KRH37522	AT1G20930.1	20706207
AT5G06150.1	KRH48128	AT1G20930.1	20706207
AT5G06150.1	KRG89142	AT1G48920.1	20706207
AT5G06150.1	KRH24189	AT1G48920.1	20706207
AT5G06150.1	KRH29160	AT1G48920.1	20706207
AT5G06150.1	KRH40855	AT1G48920.1	20706207
AT5G06150.1	KRH56424	AT1G71380.1	20706207
AT5G06150.1	KRH62487	AT1G71380.1	20706207
AT5G06150.1	KRH25124	AT2G27960.1	20706207
AT5G06150.1	KRH30550	AT2G27960.1	20706207
AT5G06150.1	KRH25124	AT2G27970.1	20706207
AT5G06150.1	KRH30550	AT2G27970.1	20706207
AT5G06150.1	KRG89488	AT3G11270.1	20706207
AT5G06150.1	KRG97770	AT3G11270.1	20706207
AT5G06150.1	KRH31114	AT3G11270.1	20706207
AT5G06150.1	KRH47306	AT3G54180.1	20706207
AT5G06150.1	KRH03906	AT4G24820.1	20706207
AT5G06150.1	KRH57185	AT4G24820.1	20706207
AT5G06150.1	KRH57190	AT4G24820.1	20706207
AT5G06150.1	KRH30104	AT4G28230.1	20706207
AT5G06150.1	KRH62794	AT4G28230.1	20706207
AT5G06150.1	KRH05109	AT5G25460.1	20706207
AT5G06150.1	KRH16010	AT5G25460.1	20706207
AT5G06150.1	KRH52488	AT5G25460.1	20706207
AT5G06150.1	KRH52489	AT5G25460.1	20706207

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH66720	Soybean	endoplasmic reticulum, vacuole	48.53	90.95
KRG95056	Soybean	cytosol	69.44	66.93
KRG95055	Soybean	nucleus	79.62	65.27
KRH66713	Soybean	nucleus	77.21	63.44
KRH66715	Soybean	nucleus	63.0	59.95
VIT_08s0040g00930.t01	Wine grape	nucleus	62.2	51.21
TraesCSU01G217300.1	Wheat	cytosol	29.49	50.93
PGSC0003DMT400018480	Potato	nucleus	55.5	48.71
Solyc10g078330.1.1	Tomato	nucleus	55.23	48.7
VIT_13s0067g01420.t01	Wine grape	nucleus	58.71	47.4
Solyc10g080950.1.1	Tomato	nucleus	58.18	46.97
KXG24389	Sorghum	nucleus	31.37	46.43
Zm00001d019469_P001	Maize	extracellular	17.69	46.15
PGSC0003DMT400072211	Potato	nucleus	57.37	46.12
CDY69551	Canola	nucleus	42.9	45.07
CDY62475	Canola	nucleus	42.36	45.01
GSMUA_AchrUn_...	Banana	nucleus	35.66	44.63
Bra028741.1-P	Field mustard	nucleus	49.6	44.58
HORVU0Hr1G001680.1	Barley	nucleus	38.07	44.38
Bra002046.1-P	Field mustard	nucleus	46.11	43.77
Bra005880.1-P	Field mustard	nucleus, plastid	48.53	43.72
GSMUA_Achr4P10090_001	Banana	nucleus	49.33	43.29
KRH14611	Soybean	nucleus	50.94	43.28
AT3G11520.1	Thale cress	nucleus	47.99	43.24
GSMUA_Achr8P23970_001	Banana	nucleus	49.6	42.53
GSMUA_Achr7P21380_001	Banana	nucleus	52.01	42.45
AT4G37490.1	Thale cress	nucleus	48.53	42.29
KRH73516	Soybean	nucleus	49.87	42.27
CDY11354	Canola	plastid	49.06	42.26
HORVU1Hr1G068080.1	Barley	plastid	38.61	42.11
CDX80988	Canola	plastid	48.26	42.06
AT5G06150.1	Thale cress	nucleus	50.13	42.02
GSMUA_Achr3P24980_001	Banana	nucleus	45.04	41.79
CDX69311	Canola	nucleus	46.38	41.29
Bra011769.1-P	Field mustard	nucleus	47.19	41.12
CDX75659	Canola	nucleus	46.92	40.89
GSMUA_Achr10P...	Banana	nucleus	49.06	40.4
HORVU1Hr1G068010.7	Barley	mitochondrion, nucleus	43.43	38.57
EES03772	Sorghum	nucleus, plastid	45.84	38.08
TraesCS1D01G309300.1	Wheat	nucleus, plastid	43.97	37.61
HORVU0Hr1G001690.16	Barley	nucleus, peroxisome	43.97	37.44
Zm00001d012560_P002	Maize	nucleus, plastid	44.77	37.19
HORVU3Hr1G078880.2	Barley	nucleus	45.04	37.09
TraesCS1B01G320900.1	Wheat	nucleus, plastid	43.16	36.93
TraesCS1A01G309800.1	Wheat	nucleus	43.16	36.93
TraesCS3D01G326600.1	Wheat	nucleus	45.04	36.92
TraesCS1D01G309400.1	Wheat	nucleus	42.9	36.61
TraesCS3A01G333000.2	Wheat	nucleus	45.04	36.52
Os01t0281200-01	Rice	nucleus	41.29	36.41
TraesCS3D01G195200.1	Wheat	plastid	40.21	36.32
TraesCS3A01G192100.1	Wheat	nucleus, plastid	40.21	36.23
TraesCS3B01G363200.3	Wheat	nucleus	44.77	36.23
TraesCS1B01G321000.1	Wheat	nucleus	42.09	36.01
HORVU1Hr1G068160.2	Barley	nucleus, plastid	42.09	35.44
HORVU0Hr1G026010.1	Barley	nucleus, plastid	42.09	35.44
EES18429	Sorghum	mitochondrion	43.7	35.43
Zm00001d043164_P002	Maize	nucleus	45.31	34.92
Zm00001d010656_P001	Maize	nucleus	41.55	34.75
Os05t0493500-00	Rice	nucleus	44.24	33.88
KRH52056	Soybean	nucleus	18.5	32.7
EES02793	Sorghum	nucleus	39.68	31.97
Zm00001d008221_P001	Maize	nucleus	40.48	31.52
TraesCS7A01G229300.1	Wheat	endoplasmic reticulum	27.08	30.7
Os02t0627800-00	Rice	cytosol, mitochondrion, peroxisome	32.17	30.3
HORVU3Hr1G040990.2	Barley	nucleus, plastid	39.14	29.67
KRH60628	Soybean	nucleus	32.17	29.63
KRH51329	Soybean	nucleus, plastid	32.71	29.4
CDY14091	Canola	plastid	49.87	28.35
KRH76553	Soybean	nucleus	32.71	28.24
KRH28901	Soybean	nucleus	32.44	27.94
Zm00001d020033_P001	Maize	nucleus	39.41	27.02
Zm00001d020996_P001	Maize	nucleus	38.87	26.65
AT1G34460.5	Thale cress	cytosol	35.12	26.31
CDY04980	Canola	nucleus	50.13	26.04
KRH61375	Soybean	nucleus	22.79	25.99
KRH61371	Soybean	nucleus	23.86	25.5
KRH05614	Soybean	nucleus	23.59	23.98
KRH15427	Soybean	nucleus, plastid	23.32	23.9
KRH52055	Soybean	nucleus	22.79	23.74
KRH05060	Soybean	nucleus	28.69	23.31
KRH16044	Soybean	nucleus	28.69	23.21
KRH61373	Soybean	nucleus, plastid	22.79	22.67
KRH61369	Soybean	nucleus	19.57	22.32
KRH64625	Soybean	plastid	28.42	21.9
KRH47513	Soybean	nucleus	27.88	21.85
KRH52524	Soybean	nucleus	27.35	21.75
KRH53279	Soybean	plastid	27.61	21.46
KRH61850	Soybean	nucleus	27.88	21.31
KRH17986	Soybean	plastid	28.69	21.27
KRH44391	Soybean	nucleus	26.54	21.02
KRH16410	Soybean	plastid	27.35	20.24
KRH44849	Soybean	nucleus	32.44	16.33

Protein Annotations

Gene3D:1.10.472.10	MapMan:13.1.1.1.2	UniProt:A0A0R0KI65	EMBL:ACUP02002006	InterPro:Cyclin-like	InterPro:Cyclin-like_sf
InterPro:Cyclin_C-dom	InterPro:Cyclin_N	EnsemblPlantsGene:GLYMA_03G124000	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	EnsemblPlants:KRH66718	ProteinID:KRH66718	ProteinID:KRH66718.1	PFAM:PF00134	PFAM:PF02984
PIRSF:PIRSF001771	PANTHER:PTHR10177	PANTHER:PTHR10177:SF267	SMART:SM00385	SMART:SM01332	SUPFAM:SSF47954
UniParc:UPI0006ED55AE	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:33679993..33682330

Molecular Weight (calculated)

41726.8 Da

IEP (calculated)

9.410

GRAVY (calculated)

-0.119

Length

373 amino acids

Sequence
(BLAST)

001: MASRPTVQQQ ARALVIQQSL QSKRVSLVKS FGAKLLATVQ APAAAENNMK QACANVAGAP PVAKGVALAK RAVAPKPGQK KVTVKPKSEE KKEKKSCSLT
101: SVFTARSKPK DQILDIDASD VDNELAAVEY IDDIYKFYKL VENESHPRDN IDSQPEITER MRAILVDWLI QVQTKFELSL ETLYLTINIV DWFLAVKNVP
201: KRELQLVGIS AVQMATKYEE IYPPQVHNFV FLSGRAYTHE QILIMEKIIL AKLDWTLTVP IPLVFLLRFI KASVPDQELE NMAHFLSELG LMNYATEMYW
301: PSMVAASAVF AARCTLNKAP LWNETLKLQT GYSQEQLMYL KVVYRKYSDP QKGAVALLPP AKNLLPEGSS ASQ

Best Arabidopsis Sequence Match ( AT2G26760.1 )
(BLAST)

001: MASSRVSDLP HQRGIAGEIK PKNVAGHGRQ NRKVLGDIGN LVTGRDVATG KDVAKKAKQP QQQTKAEVIV ISPDENEKCK PHFSRRTHIR GTKTFTATLR
101: ARSKAASGLK DAVIDIDAVD ANNELAAVEY VEDIFKFYRT VEEEGGIKDY IGSQPEINEK MRSILIDWLV DVHRKFELMP ETLYLTINLV DRFLSLTMVH
201: RRELQLLGLG AMLIACKYEE IWAPEVNDFV CISDNAYNRK QVLAMEKSIL GQVEWYITVP TPYVFLARYV KAAVPCDAEM EKLVFYLAEL GLMQYPIVVL
301: NRPSMLAASA VYAARQILKK TPFWTETLKH HTGYSEDEIM EHAKMLMKLR DSASESKLIA VFKKYSVSEN AEVALLPSLD DFSVSCA

Arabidopsis Description

CYCB1-4CYCB1 [Source:UniProtKB/TrEMBL;Acc:A0A178VPU5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.