Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G217300.1 | Wheat | cytosol | 36.24 | 50.0 |
| KXG24389 | Sorghum | nucleus | 38.59 | 45.63 |
| KRH66720 | Soybean | endoplasmic reticulum, vacuole | 30.2 | 45.23 |
| HORVU0Hr1G001680.1 | Barley | nucleus | 48.32 | 45.0 |
| HORVU1Hr1G068080.1 | Barley | plastid | 48.32 | 42.11 |
| GSMUA_Achr3P24980_001 | Banana | nucleus | 55.03 | 40.8 |
| GSMUA_Achr4P10090_001 | Banana | nucleus | 56.04 | 39.29 |
| Bra002046.1-P | Field mustard | nucleus | 51.34 | 38.93 |
| GSMUA_Achr5P19270_001 | Banana | cytosol | 28.19 | 38.71 |
| PGSC0003DMT400018480 | Potato | nucleus | 54.03 | 37.88 |
| Solyc10g078330.1.1 | Tomato | nucleus | 53.69 | 37.83 |
| GSMUA_Achr8P23970_001 | Banana | nucleus | 55.03 | 37.7 |
| CDY62475 | Canola | nucleus | 44.3 | 37.61 |
| CDY69551 | Canola | nucleus | 44.63 | 37.46 |
| KRH66715 | Soybean | nucleus | 48.66 | 36.99 |
| AT2G26760.1 | Thale cress | nucleus | 47.99 | 36.95 |
| PGSC0003DMT400058457 | Potato | nucleus | 51.34 | 36.6 |
| GSMUA_Achr7P21380_001 | Banana | nucleus | 56.04 | 36.54 |
| VIT_06s0009g02090.t01 | Wine grape | nucleus | 51.01 | 36.36 |
| GSMUA_Achr10P... | Banana | nucleus | 55.03 | 36.2 |
| Solyc01g009040.2.1 | Tomato | nucleus | 52.68 | 36.09 |
| Zm00001d012560_P002 | Maize | nucleus, plastid | 54.36 | 36.08 |
| EES03772 | Sorghum | nucleus, plastid | 54.03 | 35.86 |
| KRH66718 | Soybean | plastid | 44.63 | 35.66 |
| HORVU1Hr1G068010.7 | Barley | mitochondrion, nucleus | 49.66 | 35.24 |
| Bra005880.1-P | Field mustard | nucleus, plastid | 48.66 | 35.02 |
| VIT_08s0040g00930.t01 | Wine grape | nucleus | 53.02 | 34.88 |
| PGSC0003DMT400015245 | Potato | nucleus | 51.01 | 34.62 |
| Bra028741.1-P | Field mustard | nucleus | 47.99 | 34.46 |
| VIT_13s0067g01420.t01 | Wine grape | nucleus | 53.02 | 34.2 |
| CDY11354 | Canola | plastid | 49.66 | 34.18 |
| AT3G11520.1 | Thale cress | nucleus | 47.32 | 34.06 |
| KRH14611 | Soybean | nucleus | 50.0 | 33.94 |
| KRG95055 | Soybean | nucleus | 51.68 | 33.85 |
| HORVU0Hr1G001690.16 | Barley | nucleus, peroxisome | 49.66 | 33.79 |
| CDX69311 | Canola | nucleus | 47.32 | 33.65 |
| CDX80988 | Canola | plastid | 48.32 | 33.64 |
| Solyc06g073610.2.1 | Tomato | nucleus | 49.66 | 33.64 |
| TraesCS1D01G309300.1 | Wheat | nucleus, plastid | 48.99 | 33.49 |
| TraesCS1D01G309400.1 | Wheat | nucleus | 48.99 | 33.41 |
| HORVU3Hr1G078880.2 | Barley | nucleus | 50.67 | 33.33 |
| Zm00001d043164_P002 | Maize | nucleus | 54.03 | 33.26 |
| AT5G06150.1 | Thale cress | nucleus | 49.66 | 33.26 |
| TraesCS1B01G320900.1 | Wheat | nucleus, plastid | 48.66 | 33.26 |
| TraesCS1A01G309800.1 | Wheat | nucleus | 48.66 | 33.26 |
| TraesCS3D01G326600.1 | Wheat | nucleus | 50.67 | 33.19 |
| KRH73516 | Soybean | nucleus | 48.99 | 33.18 |
| KRH66713 | Soybean | nucleus | 50.34 | 33.04 |
| TraesCS1B01G321000.1 | Wheat | nucleus | 48.32 | 33.03 |
| AT4G37490.1 | Thale cress | nucleus | 47.32 | 32.94 |
| TraesCS3B01G363200.3 | Wheat | nucleus | 50.67 | 32.75 |
| CDX75659 | Canola | nucleus | 46.98 | 32.71 |
| Bra011769.1-P | Field mustard | nucleus | 46.98 | 32.71 |
| Solyc10g080950.1.1 | Tomato | nucleus | 50.67 | 32.68 |
| TraesCS3A01G333000.2 | Wheat | nucleus | 50.34 | 32.61 |
| PGSC0003DMT400072211 | Potato | nucleus | 50.0 | 32.11 |
| GSMUA_Achr1P14000_001 | Banana | nucleus, plasma membrane, plastid | 26.51 | 31.98 |
| HORVU1Hr1G068160.2 | Barley | nucleus, plastid | 46.98 | 31.6 |
| HORVU0Hr1G026010.1 | Barley | nucleus, plastid | 46.98 | 31.6 |
| Zm00001d010656_P001 | Maize | nucleus | 46.98 | 31.39 |
| GSMUA_Achr2P21530_001 | Banana | cytosol, nucleus, plastid | 29.87 | 31.12 |
| EES18429 | Sorghum | mitochondrion | 47.99 | 31.09 |
| KRG95056 | Soybean | cytosol | 39.93 | 30.75 |
| GSMUA_Achr11P... | Banana | nucleus | 41.95 | 30.64 |
| Os05t0493500-00 | Rice | nucleus | 48.32 | 29.57 |
| TraesCS7A01G229300.1 | Wheat | endoplasmic reticulum | 32.21 | 29.18 |
| GSMUA_Achr8P13320_001 | Banana | nucleus | 40.6 | 28.81 |
| GSMUA_Achr5P19110_001 | Banana | nucleus | 40.94 | 28.77 |
| GSMUA_Achr10P... | Banana | nucleus | 29.87 | 28.08 |
| GSMUA_Achr2P21520_001 | Banana | nucleus | 30.2 | 25.0 |
| GSMUA_Achr6P11130_001 | Banana | nucleus | 32.55 | 24.81 |
| CDY14091 | Canola | plastid | 48.32 | 21.95 |
| GSMUA_Achr2P19220_001 | Banana | nucleus, plastid | 34.56 | 20.52 |
| CDY04980 | Canola | nucleus | 48.32 | 20.06 |
| GSMUA_Achr5P06960_001 | Banana | nucleus, plastid | 32.55 | 19.4 |
| GSMUA_Achr3P25340_001 | Banana | nucleus | 35.23 | 19.37 |
| AT1G34460.5 | Thale cress | cytosol | 30.87 | 18.47 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, vacuole | 41.28 | 18.41 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:35.1 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0016020 | GO:GO:0016021 |
| EnsemblPlantsGene:GSMUA_AchrUn_randomG14460_001 | EnsemblPlants:GSMUA_AchrUn_randomP14460_001 | EnsemblPlants:GSMUA_AchrUn_randomT14460_001 | UniProt:M0U955 | PFAM:PF00134 | PFAM:PF02984 |
| PIRSF:PIRSF001771 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF267 | SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 |
| TMHMM:TMhelix | UniParc:UPI0002968916 | : | : | : | : |
Description
Cyclin-B1-5 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG14460_001]
Coordinates
chrchrUn_random:+:68172106..68173477
Molecular Weight (calculated)
33742.3 Da
IEP (calculated)
4.082
GRAVY (calculated)
-0.012
Length
298 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLNLSILSD VSGLSNDTED PDHVIDALDG DSELAIVEYV DDIYNFYKLG EKCGRPRKYM DFQFEIKEEM RSTLADRLID EFHCYELIPE TLYLTFYIVD
101: QYLSREEVME TDLMLVGVGA MLIASKYEDP LPLGIEDCID ITHGAFSKEQ ILSKEKAILE TLEWNITVPT QYVFLAYFLK AAMSDKEMED MVLFFSELGL
201: MPYSLITYLP SLVAASAVYA ARCTLKKTPR WTEMLVEYTG YSEQQLLECA RELVSLHSSA AEGKLMAVYE TYSDAEFGAV ALYPPATELL QSKKSASS
101: QYLSREEVME TDLMLVGVGA MLIASKYEDP LPLGIEDCID ITHGAFSKEQ ILSKEKAILE TLEWNITVPT QYVFLAYFLK AAMSDKEMED MVLFFSELGL
201: MPYSLITYLP SLVAASAVYA ARCTLKKTPR WTEMLVEYTG YSEQQLLECA RELVSLHSSA AEGKLMAVYE TYSDAEFGAV ALYPPATELL QSKKSASS
001: MASSRVSDLP HQRGIAGEIK PKNVAGHGRQ NRKVLGDIGN LVTGRDVATG KDVAKKAKQP QQQTKAEVIV ISPDENEKCK PHFSRRTHIR GTKTFTATLR
101: ARSKAASGLK DAVIDIDAVD ANNELAAVEY VEDIFKFYRT VEEEGGIKDY IGSQPEINEK MRSILIDWLV DVHRKFELMP ETLYLTINLV DRFLSLTMVH
201: RRELQLLGLG AMLIACKYEE IWAPEVNDFV CISDNAYNRK QVLAMEKSIL GQVEWYITVP TPYVFLARYV KAAVPCDAEM EKLVFYLAEL GLMQYPIVVL
301: NRPSMLAASA VYAARQILKK TPFWTETLKH HTGYSEDEIM EHAKMLMKLR DSASESKLIA VFKKYSVSEN AEVALLPSLD DFSVSCA
101: ARSKAASGLK DAVIDIDAVD ANNELAAVEY VEDIFKFYRT VEEEGGIKDY IGSQPEINEK MRSILIDWLV DVHRKFELMP ETLYLTINLV DRFLSLTMVH
201: RRELQLLGLG AMLIACKYEE IWAPEVNDFV CISDNAYNRK QVLAMEKSIL GQVEWYITVP TPYVFLARYV KAAVPCDAEM EKLVFYLAEL GLMQYPIVVL
301: NRPSMLAASA VYAARQILKK TPFWTETLKH HTGYSEDEIM EHAKMLMKLR DSASESKLIA VFKKYSVSEN AEVALLPSLD DFSVSCA
Arabidopsis Description
CYCB1-4CYCB1 [Source:UniProtKB/TrEMBL;Acc:A0A178VPU5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.