Factsheet for GSMUA_Achr7P08400_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 6
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P17020_001	Banana	endoplasmic reticulum, vacuole	89.37	89.37
KXG29757	Sorghum	golgi	74.66	73.66
HORVU6Hr1G037000.1	Barley	extracellular	74.66	73.26
TraesCS6B01G207200.1	Wheat	extracellular	74.39	72.99
TraesCS6A01G177500.1	Wheat	extracellular	73.84	72.46
TraesCS6D01G166800.1	Wheat	extracellular, golgi, vacuole	67.03	72.35
Bra023324.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	66.76	72.06
VIT_04s0008g05010.t01	Wine grape	extracellular, golgi	71.39	71.2
Os02t0205200-01	Rice	mitochondrion, nucleus, plastid	70.3	70.68
GSMUA_Achr2P08300_001	Banana	extracellular	70.03	69.65
CDY54909	Canola	cytoskeleton, cytosol, peroxisome	64.31	69.62
GSMUA_Achr1P14570_001	Banana	extracellular	69.48	69.29
CDX91217	Canola	extracellular	68.66	68.85
CDX85713	Canola	extracellular	68.39	68.58
PGSC0003DMT400074806	Potato	extracellular	68.94	68.19
Solyc08g067030.2.1	Tomato	extracellular	68.66	67.92
AT5G11420.1	Thale cress	extracellular, golgi, vacuole	67.57	67.76
CDX97108	Canola	golgi	67.03	67.21
AT5G25460.1	Thale cress	endoplasmic reticulum, extracellular	67.57	67.21
KRH16010	Soybean	nucleus	66.76	66.94
KRH05109	Soybean	nucleus	66.76	66.94
CDX68849	Canola	golgi	66.48	66.85
CDY19801	Canola	extracellular	67.3	66.76
CDX75247	Canola	golgi	66.21	66.58
Bra011349.1-P	Field mustard	golgi	66.21	66.58
Bra009841.1-P	Field mustard	extracellular	66.48	66.48
CDX88180	Canola	extracellular	66.48	66.48
CDX80511	Canola	extracellular	66.48	66.48
AT4G32460.1	Thale cress	endoplasmic reticulum, golgi	65.94	66.3
Bra020500.1-P	Field mustard	extracellular	65.67	65.85
CDY05493	Canola	extracellular	65.67	65.85
Solyc06g067910.2.1	Tomato	nucleus	65.94	65.05
PGSC0003DMT400073388	Potato	mitochondrion	65.67	64.96
PGSC0003DMT400014547	Potato	extracellular	65.12	64.95
KRH23537	Soybean	nucleus	65.67	64.44
Solyc03g120040.2.1	Tomato	extracellular, nucleus	45.23	64.34
KRH09784	Soybean	nucleus	65.12	63.9
KRH52488	Soybean	extracellular	63.22	63.56
PGSC0003DMT400073682	Potato	cytosol	57.77	63.28
KRH52489	Soybean	extracellular, golgi	63.76	63.24
VIT_09s0002g05930.t01	Wine grape	endoplasmic reticulum, extracellular	68.94	62.47
Os02t0527500-00	Rice	plastid	21.8	61.07
Solyc12g042930.1.1	Tomato	endoplasmic reticulum, golgi	62.94	60.79
GSMUA_Achr9P25300_001	Banana	extracellular, vacuole	53.68	54.27
KRH44408	Soybean	golgi	62.67	52.63
CDX80516	Canola	plastid	43.6	52.29
Zm00001d015715_P001	Maize	plasma membrane	72.75	45.56
GSMUA_Achr4P15090_001	Banana	cytosol, endoplasmic reticulum, peroxisome	46.32	44.85
GSMUA_Achr6P29630_001	Banana	cytosol, plastid	38.42	44.62
GSMUA_Achr3P31400_001	Banana	plasma membrane	48.77	39.96
GSMUA_Achr6P12280_001	Banana	cytosol, peroxisome, plasma membrane	15.8	27.75

Protein Annotations

EnsemblPlants:GSMUA_Achr7P08400_001	EnsemblPlants:GSMUA_Achr7T08400_001	EnsemblPlantsGene:GSMUA_Achr7G08400_001	Gene3D:2.60.120.260	InterPro:DUF642	InterPro:Galactose-bd-like_sf
InterPro:IPR008979	PANTHER:PTHR31265	PANTHER:PTHR31265:SF3	PFAM:PF04862	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF49785	UniParc:UPI00029592F5	UniProt:M0TFT0	MapMan:35.2	:	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G08400_001]

Coordinates

chr7:-:6268013..6269555

Molecular Weight (calculated)

40182.0 Da

IEP (calculated)

7.811

GRAVY (calculated)

-0.147

Length

367 amino acids

Sequence
(BLAST)

001: MLRLLPSFLL LCVACQLAAA FTDGLLPNGN FEQGPKPWQL KGTKVAGRDA IPRWQITGFV EYIQWGQKQG DMLLVVPEGS YAVRLGNDAS IKQSVKVTKG
101: VRYSLTFSAA RTCAQEERLN VSASPESGVL PMQTMYSSNG WDSYAWAWLA KSDEVEVVIH NTGVSEDPAC GPLIDSVAIK QLFPPRRTNT NLLKNGDFEE
201: GPYILPNTTW GVLIPPQIED DHSPLPGWMV ESLKAVKYLD AEHFSVPRGR RAVELLAGKE SAIAQVVRTV PGRRYALSFA VGDASNACEG SLLVEAFAGE
301: HTIKVPYESK GRGGSKRAVL QFTATTARTR VVFWSSYYNT RSDDLSSLCG PVLDDVALVS VRYPKHA

Best Arabidopsis Sequence Match ( AT5G25460.1 )
(BLAST)

001: MEGVTVVSFF LLFIATAMAA KSTVSFRDGM LPNGDFELGP KPSDMKGTEI LNKLAIPNWE VTGFVEYIKS GHKQGDMLLV VPAGKFAVRL GNEASIKQRL
101: KVVKGMYYSL TFSAARTCAQ DERLNISVAP DSGVIPIQTV YSSSGWDLYA WAFQAESDVA EVVIHNPGVE EDPACGPLID GVAMRSLYPP RPTNKNILKN
201: GGFEEGPLVL PGSTTGVLIP PFIEDDHSPL PGWMVESLKA VKYVDVEHFS VPQGRRAIEL VAGKESAIAQ VVRTVIGKTY VLSFAVGDAN NACKGSMVVE
301: AFAGKDTLKV PYESKGTGGF KRASIRFVAV STRSRIMFYS TFYAMRSDDF SSLCGPVIDD VKLISVRKP

Arabidopsis Description

At5g25460 [Source:UniProtKB/TrEMBL;Acc:Q94F20]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.