Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 2
- plastid 1
- plasma membrane 2
- peroxisome 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_14s0068g02080.t01 | Wine grape | extracellular, plasma membrane, vacuole | 44.5 | 23.43 |
| AT5G14150.2 | Thale cress | extracellular, plasma membrane, vacuole | 39.71 | 21.67 |
| CDX70545 | Canola | extracellular, vacuole | 39.23 | 21.47 |
| Bra006241.1-P | Field mustard | extracellular, plasma membrane | 39.23 | 21.3 |
| CDX78563 | Canola | extracellular, plasma membrane | 39.23 | 21.3 |
| GSMUA_Achr9P25300_001 | Banana | extracellular, vacuole | 27.75 | 15.98 |
| GSMUA_Achr7P08400_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 27.75 | 15.8 |
| GSMUA_Achr2P08300_001 | Banana | extracellular | 27.75 | 15.72 |
| GSMUA_Achr4P15090_001 | Banana | cytosol, endoplasmic reticulum, peroxisome | 28.23 | 15.57 |
| GSMUA_Achr1P14570_001 | Banana | extracellular | 27.27 | 15.49 |
| GSMUA_Achr2P17020_001 | Banana | endoplasmic reticulum, vacuole | 26.79 | 15.26 |
| GSMUA_Achr3P31400_001 | Banana | plasma membrane | 30.14 | 14.06 |
| GSMUA_Achr6P29630_001 | Banana | cytosol, plastid | 21.05 | 13.92 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P12280_001 | EnsemblPlants:GSMUA_Achr6T12280_001 | EnsemblPlantsGene:GSMUA_Achr6G12280_001 | InterPro:DUF642 | PANTHER:PTHR31265 | PANTHER:PTHR31265:SF4 |
| PFAM:PF04862 | SEG:seg | UniParc:UPI0002968C2A | UniProt:M0T6C6 | MapMan:35.2 | : |
Description
Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G12280_001]
Coordinates
chr6:-:8192250..8192970
Molecular Weight (calculated)
22457.0 Da
IEP (calculated)
4.239
GRAVY (calculated)
0.258
Length
209 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIAANEFVN GGFEDGPIFI KNSSEGILLE PTEDLTNTPL FEWAVFGAVK YVDSKHYLVP EGNAAVEIVS TIGAIRTILL LKEGSSYRLE FVMGVPIDSC
101: TGELILGVQA GPTSQNFTLP SNGTGYSKKF SLGFRAETNL TSIGFMNVQG GETSDHVICG PLVDNVSISA SLRLQVGLQQ LLLLPSLLLA AVLQIDKEFP
201: RNSFSDLVI
101: TGELILGVQA GPTSQNFTLP SNGTGYSKKF SLGFRAETNL TSIGFMNVQG GETSDHVICG PLVDNVSISA SLRLQVGLQQ LLLLPSLLLA AVLQIDKEFP
201: RNSFSDLVI
001: MAIWFQRIFL LLLVSCCASS DFLENPDFES PPLNLPTNSN ASSVSLDQNS TLPGWTFQGT VLYVELPDTG HAVQLGEDGK INQTFIAKGD ELNYILTFAL
101: IHAGQNCTSS AGLSVSGPDS NAVFSYRQNY SKVSWQSYSH NLGSWGNGEP INLVLESQAI DSDSDTNSTC WPIIDTLLIK TVGVTLVQDS GNLLINGGFE
201: SGPGFLPNST DGVLIDAVPS LIQSPLRQWS VIGTVRYIDS EHFHVPEGKA AIEILSNTAP SGIQTATKGT SEGSRYNLTF TLGDANDACR GHFVVGAQAG
301: SVTQNFTLES NGTGSGEKFG LVFEADKDAA QISFTSYSVT MTKENVVCGP VIDEVMVHPL GGTASVKPTW LLLIFALLYV AVL
101: IHAGQNCTSS AGLSVSGPDS NAVFSYRQNY SKVSWQSYSH NLGSWGNGEP INLVLESQAI DSDSDTNSTC WPIIDTLLIK TVGVTLVQDS GNLLINGGFE
201: SGPGFLPNST DGVLIDAVPS LIQSPLRQWS VIGTVRYIDS EHFHVPEGKA AIEILSNTAP SGIQTATKGT SEGSRYNLTF TLGDANDACR GHFVVGAQAG
301: SVTQNFTLES NGTGSGEKFG LVFEADKDAA QISFTSYSVT MTKENVVCGP VIDEVMVHPL GGTASVKPTW LLLIFALLYV AVL
Arabidopsis Description
Emb [Source:UniProtKB/TrEMBL;Acc:Q9FMT6]
SUBAcon: [plasma membrane,extracellular,vacuole]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.