Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 7
- golgi 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX70545 | Canola | extracellular, vacuole | 53.9 | 56.02 |
| Bra006241.1-P | Field mustard | extracellular, plasma membrane | 53.9 | 55.58 |
| CDX78563 | Canola | extracellular, plasma membrane | 53.9 | 55.58 |
| AT5G14150.2 | Thale cress | extracellular, plasma membrane, vacuole | 52.9 | 54.83 |
| GSMUA_Achr6P12280_001 | Banana | cytosol, peroxisome, plasma membrane | 23.43 | 44.5 |
| VIT_04s0008g05010.t01 | Wine grape | extracellular, golgi | 27.71 | 29.89 |
| VIT_08s0007g08460.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 26.95 | 29.16 |
| VIT_13s0064g00460.t01 | Wine grape | extracellular | 25.19 | 27.78 |
| VIT_10s0003g03250.t01 | Wine grape | extracellular, golgi, plasma membrane | 27.2 | 27.55 |
| VIT_09s0002g05930.t01 | Wine grape | endoplasmic reticulum, extracellular | 26.95 | 26.42 |
Protein Annotations
| EntrezGene:100241149 | wikigene:100241149 | Gene3D:2.60.120.260 | MapMan:35.2 | UniProt:A5BE38 | EMBL:AM456220 |
| ProteinID:CAN70048 | ProteinID:CAN70048.1 | ProteinID:CCB47021 | ProteinID:CCB47021.1 | InterPro:DUF642 | EMBL:FN595232 |
| InterPro:Galactose-bd-like_sf | InterPro:IPR008979 | EntrezGene:LOC100241149 | wikigene:LOC100241149 | PFAM:PF04862 | PANTHER:PTHR31265 |
| PANTHER:PTHR31265:SF4 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0001520999 | ArrayExpress:VIT_14s0068g02080 | EnsemblPlantsGene:VIT_14s0068g02080 |
| EnsemblPlants:VIT_14s0068g02080.t01 | RefSeq:XP_002273876 | RefSeq:XP_002273876.1 | : | : | : |
Description
No Description!
Coordinates
chr14:-:25693147..25694577
Molecular Weight (calculated)
42269.9 Da
IEP (calculated)
4.185
GRAVY (calculated)
0.061
Length
397 amino acids
Sequence
(BLAST)
(BLAST)
001: MALSPSSEIR MQLGLCLLPI LFIALASTAA DLQNPDFESP PSNLPENSTA PFELLTANNT IPGWTFDGTV QYVTAGPTIA LPGNGHAIQL GQDGKINQTF
101: IANTNTMNYI LTFTLALGDQ NCSAIADILV SAPDSRGVFS LKQHYGKETW ESYGHYLGGW RDGEHINLVI QSQTTEPNPN STCWPIVDTL LLKGVATLDK
201: GNGNLLPNGG FESGPDFLSN STEGILLDPV SSPIQSAIQQ WSVLGTVKYI DSKNYFVPEG NAAIEFISGI STGIQTASTL TEGSAYNLDF TLGDANDSCV
301: GTFILGAQAG STVQNFTLQS KGTGSAKNFS MTFKADSSVT PISFLSYSSS QTKDGVFCGP VVDNVILQAS YGLKPEIPSK VTFCWLVFLV AILQLTM
101: IANTNTMNYI LTFTLALGDQ NCSAIADILV SAPDSRGVFS LKQHYGKETW ESYGHYLGGW RDGEHINLVI QSQTTEPNPN STCWPIVDTL LLKGVATLDK
201: GNGNLLPNGG FESGPDFLSN STEGILLDPV SSPIQSAIQQ WSVLGTVKYI DSKNYFVPEG NAAIEFISGI STGIQTASTL TEGSAYNLDF TLGDANDSCV
301: GTFILGAQAG STVQNFTLQS KGTGSAKNFS MTFKADSSVT PISFLSYSSS QTKDGVFCGP VVDNVILQAS YGLKPEIPSK VTFCWLVFLV AILQLTM
001: MAIWFQRIFL LLLVSCCASS DFLENPDFES PPLNLPTNSN ASSVSLDQNS TLPGWTFQGT VLYVELPDTG HAVQLGEDGK INQTFIAKGD ELNYILTFAL
101: IHAGQNCTSS AGLSVSGPDS NAVFSYRQNY SKVSWQSYSH NLGSWGNGEP INLVLESQAI DSDSDTNSTC WPIIDTLLIK TVGVTLVQDS GNLLINGGFE
201: SGPGFLPNST DGVLIDAVPS LIQSPLRQWS VIGTVRYIDS EHFHVPEGKA AIEILSNTAP SGIQTATKGT SEGSRYNLTF TLGDANDACR GHFVVGAQAG
301: SVTQNFTLES NGTGSGEKFG LVFEADKDAA QISFTSYSVT MTKENVVCGP VIDEVMVHPL GGTASVKPTW LLLIFALLYV AVL
101: IHAGQNCTSS AGLSVSGPDS NAVFSYRQNY SKVSWQSYSH NLGSWGNGEP INLVLESQAI DSDSDTNSTC WPIIDTLLIK TVGVTLVQDS GNLLINGGFE
201: SGPGFLPNST DGVLIDAVPS LIQSPLRQWS VIGTVRYIDS EHFHVPEGKA AIEILSNTAP SGIQTATKGT SEGSRYNLTF TLGDANDACR GHFVVGAQAG
301: SVTQNFTLES NGTGSGEKFG LVFEADKDAA QISFTSYSVT MTKENVVCGP VIDEVMVHPL GGTASVKPTW LLLIFALLYV AVL
Arabidopsis Description
Emb [Source:UniProtKB/TrEMBL;Acc:Q9FMT6]
SUBAcon: [plasma membrane,extracellular,vacuole]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.