Factsheet for Bra006241.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78563	Canola	extracellular, plasma membrane	100.0	100.0
AT5G14150.2	Thale cress	extracellular, plasma membrane, vacuole	85.71	86.16
VIT_14s0068g02080.t01	Wine grape	extracellular, plasma membrane, vacuole	55.58	53.9
GSMUA_Achr6P12280_001	Banana	cytosol, peroxisome, plasma membrane	21.3	39.23
Bra023324.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	29.87	33.82
Bra020500.1-P	Field mustard	extracellular	31.43	33.06
Bra009841.1-P	Field mustard	extracellular	30.91	32.43
Bra011349.1-P	Field mustard	golgi	29.35	30.96
Bra016917.1-P	Field mustard	extracellular	29.61	30.48
Bra029693.1-P	Field mustard	extracellular	28.83	30.41
Bra004651.1-P	Field mustard	extracellular	28.57	29.73
Bra040046.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	28.05	29.59
Bra005419.1-P	Field mustard	plasma membrane	30.65	29.5
Bra004650.1-P	Field mustard	extracellular	28.31	29.38
Bra035192.1-P	Field mustard	extracellular	25.71	29.03
Bra003558.1-P	Field mustard	extracellular	27.53	28.73
Bra032349.1-P	Field mustard	extracellular, golgi, plasma membrane	29.61	27.87

Protein Annotations

EnsemblPlants:Bra006241.1	EnsemblPlants:Bra006241.1-P	EnsemblPlantsGene:Bra006241	InterPro:DUF642	PANTHER:PTHR31265	PANTHER:PTHR31265:SF4
PFAM:PF04862	SEG:seg	SignalP:SignalP-noTM	UniParc:UPI000253FB40	UniProt:M4CPV2	MapMan:35.2

Description

AT5G14150 (E=6e-167) | unknown protein

Coordinates

chrA03:-:2659373..2660769

Molecular Weight (calculated)

40904.9 Da

IEP (calculated)

4.083

GRAVY (calculated)

0.087

Length

385 amino acids

Sequence
(BLAST)

001: MAIWFHRTFL LLLVSSCASS DFLENPDFES PPLNLSSNAS SGAFVLLDQN TTLPGWTFQG TVQYVTSPDL PDSGHAVQLG EDGKINQTFI AKGDDLNYIL
101: TFALIPGGEN CSSSSGLSVS GPDSNSVFSY KQNYSKVPWQ SYSHNLGKWG NGEPINLVLE SQAIDSDTNS TCWPIVDTLL IKTVGVTLDQ DSANLLTNGG
201: FESGPGFLPN STEGVLIDAV PSLIQSALTQ WSVIGTVRYI DSEHFHVPEG KAAIEILADT TPSGIQTATR DTSEGSRYNL TFTLGDANDA CIGHFVVGVE
301: AGSAAQNFTL ESNGTGSGEK FGLVFVADKA AAQISFTSYS VTMTKEDVLC GPVIDEVIVH PLSGTASLKP TWLLLVLALL YVAVL

Best Arabidopsis Sequence Match ( AT5G14150.2 )
(BLAST)

001: MAIWFQRIFL LLLVSCCASS DFLENPDFES PPLNLPTNSN ASSVSLDQNS TLPGWTFQGT VLYVELPDTG HAVQLGEDGK INQTFIAKGD ELNYILTFAL
101: IHAGQNCTSS AGLSVSGPDS NAVFSYRQNY SKVSWQSYSH NLGSWGNGEP INLVLESQAI DSDSDTNSTC WPIIDTLLIK TVGVTLVQDS GNLLINGGFE
201: SGPGFLPNST DGVLIDAVPS LIQSPLRQWS VIGTVRYIDS EHFHVPEGKA AIEILSNTAP SGIQTATKGT SEGSRYNLTF TLGDANDACR GHFVVGAQAG
301: SVTQNFTLES NGTGSGEKFG LVFEADKDAA QISFTSYSVT MTKENVVCGP VIDEVMVHPL GGTASVKPTW LLLIFALLYV AVL

Arabidopsis Description

Emb [Source:UniProtKB/TrEMBL;Acc:Q9FMT6]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.