Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- plastid 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY06908 | Canola | extracellular | 97.86 | 97.86 |
Bra004650.1-P | Field mustard | extracellular | 87.7 | 88.41 |
AT2G41800.1 | Thale cress | extracellular, vacuole | 85.29 | 86.22 |
Bra004651.1-P | Field mustard | extracellular | 79.68 | 80.54 |
VIT_08s0007g08460.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 63.64 | 64.85 |
GSMUA_Achr9P25300_001 | Banana | extracellular, vacuole | 57.22 | 58.95 |
Solyc04g015610.2.1 | Tomato | extracellular | 58.02 | 58.81 |
Solyc04g015620.2.1 | Tomato | plastid | 56.15 | 56.76 |
Bra029693.1-P | Field mustard | extracellular | 55.08 | 56.44 |
Bra040046.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 55.08 | 56.44 |
PGSC0003DMT400081713 | Potato | endoplasmic reticulum, extracellular, plasma membrane | 30.48 | 55.61 |
Bra023324.1-P | Field mustard | cytoskeleton, cytosol, peroxisome | 49.2 | 54.12 |
EER93244 | Sorghum | extracellular, vacuole | 55.35 | 53.63 |
Os03t0807700-01 | Rice | plastid | 55.08 | 52.42 |
Bra011349.1-P | Field mustard | golgi | 50.8 | 52.05 |
TraesCS5D01G469800.1 | Wheat | extracellular, vacuole | 54.28 | 51.13 |
Zm00001d034547_P002 | Maize | extracellular, vacuole | 55.08 | 49.76 |
Bra009841.1-P | Field mustard | extracellular | 48.4 | 49.32 |
Bra020500.1-P | Field mustard | extracellular | 47.59 | 48.63 |
HORVU5Hr1G109880.2 | Barley | golgi, vacuole | 54.01 | 48.44 |
Bra003558.1-P | Field mustard | extracellular | 47.59 | 48.24 |
GSMUA_Achr6P29630_001 | Banana | cytosol, plastid | 40.37 | 47.78 |
Bra035192.1-P | Field mustard | extracellular | 43.05 | 47.21 |
TraesCS5A01G458700.1 | Wheat | extracellular, golgi | 54.28 | 46.99 |
Os07t0206900-01 | Rice | cytosol, peroxisome | 10.43 | 39.8 |
Bra005419.1-P | Field mustard | plasma membrane | 39.04 | 36.5 |
Bra032349.1-P | Field mustard | extracellular, golgi, plasma membrane | 39.84 | 36.43 |
Bra006241.1-P | Field mustard | extracellular, plasma membrane | 30.48 | 29.61 |
Protein Annotations
Description
AT2G41800 (E=5e-184) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF642 (InterPro:IPR006946), Galactose-binding like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41810.1); Has 156 Blast hits to 155 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 156; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Coordinates
chrA04:-:17612422..17614007
Molecular Weight (calculated)
40909.5 Da
IEP (calculated)
9.418
GRAVY (calculated)
-0.028
Length
374 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLYHSLCFL LLLSLCHGSH SHNRGVRPRR TPHLDGLLPN GNFEHIPLKS NMKGRQIIGT NSLPHWQISG HVELVSGGPQ PGGFYFPVPR GVHAVRLGSL
101: ASISQDVRVK RGLVYSLTFG ATKSCAQDEN IKVSVPGQAN ELPIQTVFSS DGGDTYAWAF RAMSDVVRVT FHNPGVQEDR TCGPLVDVVA IKEILPLQYN
201: RGNLVKNGGF EIGPHIFTNY STGILIPAKI QDIISPLPGW IIESLKPVKY IDERHYKVPF GLAAVELVAG RESAIAQIIR TVAGKAYMLS FTVGDAQNGC
301: HGSMMVEAFA GKQPFKLPFV SEGKGAYKTG HFKFVADSNR TRLTFYSAFY HTKLHDFGHL CGPVLDSVIV LPAH
101: ASISQDVRVK RGLVYSLTFG ATKSCAQDEN IKVSVPGQAN ELPIQTVFSS DGGDTYAWAF RAMSDVVRVT FHNPGVQEDR TCGPLVDVVA IKEILPLQYN
201: RGNLVKNGGF EIGPHIFTNY STGILIPAKI QDIISPLPGW IIESLKPVKY IDERHYKVPF GLAAVELVAG RESAIAQIIR TVAGKAYMLS FTVGDAQNGC
301: HGSMMVEAFA GKQPFKLPFV SEGKGAYKTG HFKFVADSNR TRLTFYSAFY HTKLHDFGHL CGPVLDSVIV LPAH
001: MSLYHSLSIF LLLSLCHGSY SLQPRRVPHL DGILPNGNFE ITPLKSNMKG RQIIGANSLP HWEIAGHVEL VSGGPQPGGF YFPVPRGVHA VRLGNLGTIS
101: QNVRVKSGLV YSLTFGATRT CAQDENIKVS VPGQANELPL QTVFSSDGGD TYAWAFKATS DVVKVTFHNP GVQEDRTCGP LLDVVAIKEI LPLRYTRGNL
201: VKNGGFEIGP HVFANFSTGI LIPARIQDFI SPLPGWIVES LKPVKYIDRR HFKVPYGQGA VELVAGRESA IAQIIRTIAG KAYMLSFAVG DAQNGCHGSM
301: MVEAFAGREP FKLSFMSEGK GAFKTGHFRF VADSDRTRLT FYSAFYHTKL HDFGHLCGPV LDSVVVTLAR
101: QNVRVKSGLV YSLTFGATRT CAQDENIKVS VPGQANELPL QTVFSSDGGD TYAWAFKATS DVVKVTFHNP GVQEDRTCGP LLDVVAIKEI LPLRYTRGNL
201: VKNGGFEIGP HVFANFSTGI LIPARIQDFI SPLPGWIVES LKPVKYIDRR HFKVPYGQGA VELVAGRESA IAQIIRTIAG KAYMLSFAVG DAQNGCHGSM
301: MVEAFAGREP FKLSFMSEGK GAFKTGHFRF VADSDRTRLT FYSAFYHTKL HDFGHLCGPV LDSVVVTLAR
Arabidopsis Description
At2g41800/T11A7.10 [Source:UniProtKB/TrEMBL;Acc:O22940]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.