Factsheet for Bra011349.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 5
golgi 7
plasma membrane 5
endoplasmic reticulum 5
vacuole 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75247	Canola	golgi	100.0	100.0
AT4G32460.1	Thale cress	endoplasmic reticulum, golgi	92.33	92.33
Bra023324.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	76.44	82.06
Bra009841.1-P	Field mustard	extracellular	77.53	77.11
Bra020500.1-P	Field mustard	extracellular	77.26	77.05
VIT_04s0008g05010.t01	Wine grape	extracellular, golgi	75.07	74.46
KRH16010	Soybean	nucleus	72.6	72.4
KRH05109	Soybean	nucleus	72.33	72.13
Solyc08g067030.2.1	Tomato	extracellular	69.32	68.19
GSMUA_Achr1P14570_001	Banana	extracellular	68.49	67.93
PGSC0003DMT400074806	Potato	extracellular	69.04	67.92
GSMUA_Achr2P08300_001	Banana	extracellular	68.49	67.75
KRH52488	Soybean	extracellular	67.67	67.67
KRH52489	Soybean	extracellular, golgi	67.12	66.22
GSMUA_Achr7P08400_001	Banana	endoplasmic reticulum, extracellular, vacuole	66.58	66.21
GSMUA_Achr2P17020_001	Banana	endoplasmic reticulum, vacuole	66.3	65.94
TraesCS7A01G453100.1	Wheat	golgi	64.93	64.05
TraesCS7D01G442500.1	Wheat	golgi	64.93	64.05
TraesCS7B01G353600.2	Wheat	extracellular	64.93	64.05
TraesCS6B01G207200.1	Wheat	extracellular	65.21	63.64
HORVU6Hr1G037000.1	Barley	extracellular	64.93	63.37
TraesCS6A01G177500.1	Wheat	extracellular	64.66	63.1
Os01t0611000-01	Rice	extracellular	64.11	62.73
KXG29757	Sorghum	golgi	63.84	62.63
Os02t0205200-01	Rice	mitochondrion, nucleus, plastid	62.19	62.19
TraesCS6D01G166800.1	Wheat	extracellular, golgi, vacuole	57.26	61.47
OQU87155	Sorghum	golgi	62.74	61.07
Bra035192.1-P	Field mustard	extracellular	56.71	60.7
Bra003558.1-P	Field mustard	extracellular	60.0	59.35
Zm00001d044455_P001	Maize	plasma membrane	61.64	59.06
Bra040046.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	55.89	55.89
Os04t0494600-01	Rice	extracellular	56.99	55.17
Bra029693.1-P	Field mustard	extracellular	55.07	55.07
TraesCS2D01G432500.1	Wheat	extracellular, golgi	56.16	54.96
TraesCS2B01G455800.1	Wheat	golgi	55.89	54.69
Os04t0494950-01	Rice	extracellular, vacuole	55.62	54.57
TraesCS2A01G434700.1	Wheat	golgi	55.34	54.16
TraesCS2D01G349900.1	Wheat	extracellular	53.97	53.97
Zm00001d003183_P001	Maize	extracellular, mitochondrion, plasma membrane, plastid	56.16	53.95
TraesCS2B01G369900.1	Wheat	extracellular	53.7	53.7
TraesCS2B01G369800.1	Wheat	extracellular	55.07	53.6
Zm00001d003186_P001	Maize	extracellular	55.34	53.3
EES11052	Sorghum	mitochondrion	55.34	53.3
TraesCS2A01G351700.1	Wheat	extracellular	53.15	53.15
TraesCS2A01G351600.1	Wheat	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	54.79	53.05
Os04t0495000-00	Rice	extracellular, golgi, vacuole	53.97	52.81
Os02t0527500-00	Rice	plastid	18.9	52.67
HORVU2Hr1G085440.1	Barley	extracellular	54.52	52.65
TraesCS2D01G349800.1	Wheat	mitochondrion	54.25	52.52
TraesCS5B01G390400.1	Wheat	plastid	44.11	52.44
TraesCS5D01G395400.1	Wheat	extracellular	54.25	52.38
EES11054	Sorghum	extracellular, vacuole	53.97	52.12
Zm00001d003184_P001	Maize	endoplasmic reticulum, extracellular, mitochondrion, peroxisome	51.23	52.09
Bra004650.1-P	Field mustard	extracellular	52.88	52.02
Os04t0494900-01	Rice	extracellular	53.7	51.99
TraesCS2B01G369500.1	Wheat	cytosol	50.96	51.96
TraesCS5A01G385400.1	Wheat	extracellular	53.42	51.72
EES11053	Sorghum	endoplasmic reticulum, extracellular, vacuole	53.42	51.72
OQU81862	Sorghum	cytosol, endoplasmic reticulum, golgi, mitochondrion	55.34	51.53
KXG26630	Sorghum	extracellular	53.42	51.32
TraesCS2B01G369700.1	Wheat	endoplasmic reticulum, golgi	52.88	50.92
Bra004651.1-P	Field mustard	extracellular	51.51	50.81
Bra016917.1-P	Field mustard	extracellular	52.05	50.8
TraesCS2D01G349700.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	52.6	50.66
HORVU5Hr1G094750.2	Barley	extracellular	53.15	50.26
TraesCS2A01G351400.1	Wheat	extracellular	51.78	50.13
HORVU2Hr1G085430.1	Barley	endoplasmic reticulum, golgi	51.51	49.74
TraesCS2A01G351500.1	Wheat	extracellular, golgi	51.51	49.6
TraesCS2D01G349500.1	Wheat	extracellular	51.23	49.6
TraesCS2B01G440300.1	Wheat	extracellular	49.86	47.4
TraesCS2A01G421300.1	Wheat	extracellular	49.59	47.01
TraesCS2A01G351200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	47.67	45.91
TraesCS2D01G349200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	47.67	45.91
TraesCS2B01G369300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	47.67	45.91
Bra005419.1-P	Field mustard	plasma membrane	48.77	44.5
KXG26629	Sorghum	golgi	50.14	44.2
Zm00001d003187_P002	Maize	endoplasmic reticulum, plasma membrane	47.67	43.83
Zm00001d025754_P001	Maize	golgi	48.77	43.63
Bra032349.1-P	Field mustard	extracellular, golgi, plasma membrane	48.22	43.03
HORVU2Hr1G085370.2	Barley	endoplasmic reticulum	43.84	42.11
Zm00001d015715_P001	Maize	plasma membrane	61.92	38.57
HORVU2Hr1G085340.2	Barley	mitochondrion, plastid	51.78	37.8
HORVU2Hr1G085520.2	Barley	extracellular	34.25	34.25
Os03t0328501-00	Rice	plastid	26.58	31.19
Zm00001d003185_P001	Maize	extracellular	56.16	29.62
Bra006241.1-P	Field mustard	extracellular, plasma membrane	30.96	29.35
Os04t0494800-01	Rice	extracellular	18.63	17.94
Os07t0132600-00	Rice	mitochondrion, nucleus, plastid	17.81	17.81

Protein Annotations

Gene3D:2.60.120.260	MapMan:35.2	EnsemblPlantsGene:Bra011349	EnsemblPlants:Bra011349.1	EnsemblPlants:Bra011349.1-P	InterPro:DUF642
GO:GO:0000003	GO:GO:0005575	GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009505	GO:GO:0009790	GO:GO:0009791
GO:GO:0009793	GO:GO:0009987	GO:GO:0030312	GO:GO:0045489	InterPro:Galactose-bd-like_sf	InterPro:IPR008979
UniProt:M4D4E5	PFAM:PF04862	PANTHER:PTHR31265	PANTHER:PTHR31265:SF23	SUPFAM:SSF49785	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI0002546433	:	:	:	:

Description

AT4G32460 (E=5e-201) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF642 (InterPro:IPR006946), Galactose-binding like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G11420.1); Has 182 Blast hits to 158 proteins in 12 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 180; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

Coordinates

chrA01:+:2621291..2623579

Molecular Weight (calculated)

39814.0 Da

IEP (calculated)

8.655

GRAVY (calculated)

-0.076

Length

365 amino acids

Sequence
(BLAST)

001: MKKMGVIVFL LLHSIFYTAF CFKDGLLPNG DFELGPHHTD MKGTQVMNKT AIPSWELSGF VEYIPSGHKQ GDMILVVPKG AFAVRLGNEA SIKQKINVKK
101: GSYYSITFSA ARTCAQDERL NVSVAPHHGV MPIQTVYSSS GWDLYSWAFK AQSDYAEVVI HNPGVEEDPA CGPLIDGVAM RALYPPRPTN KNILKNGGFE
201: EGPWVLPNTS SGVLIPPNAV DDHSPLPGWM VESLKAVKYI DSDHFSVPQG RRAVELVAGK ESAVAQVVRT TPGKIYVLSF AVGDASNACA GSMIVEAFAG
301: KDTLKVPHES KGKGGFKRAS LKFVAVSDRT RIMFYSTFYA MRNDDFSSLC GPVIDDVKLL SARRM

Best Arabidopsis Sequence Match ( AT4G32460.1 )
(BLAST)

001: MKEMGVIVLL LLHSFFYVAF CFNDGLLPNG DFELGPRHSD MKGTQVINIT AIPNWELSGF VEYIPSGHKQ GDMILVVPKG AFAVRLGNEA SIKQKISVKK
101: GSYYSITFSA ARTCAQDERL NVSVAPHHAV MPIQTVYSSS GWDLYSWAFK AQSDYADIVI HNPGVEEDPA CGPLIDGVAM RALFPPRPTN KNILKNGGFE
201: EGPWVLPNIS SGVLIPPNSI DDHSPLPGWM VESLKAVKYI DSDHFSVPQG RRAVELVAGK ESAVAQVVRT IPGKTYVLSF SVGDASNACA GSMIVEAFAG
301: KDTIKVPYES KGKGGFKRSS LRFVAVSSRT RVMFYSTFYA MRNDDFSSLC GPVIDDVKLL SARRP

Arabidopsis Description

At4g32460 [Source:UniProtKB/TrEMBL;Acc:Q8LAR0]
SUBAcon: [golgi,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.