Factsheet for TraesCS2B01G455800.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 5
golgi 6
plasma membrane 4
endoplasmic reticulum 4
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G432500.1	Wheat	extracellular, golgi	95.17	95.17
TraesCS2A01G434700.1	Wheat	golgi	94.37	94.37
TraesCS2B01G369900.1	Wheat	extracellular	71.58	73.15
Os04t0495000-00	Rice	extracellular, golgi, vacuole	69.44	69.44
EES11053	Sorghum	endoplasmic reticulum, extracellular, vacuole	69.97	69.23
TraesCS2B01G369800.1	Wheat	extracellular	67.29	66.93
TraesCS7B01G353600.2	Wheat	extracellular	62.73	63.24
GSMUA_Achr1P14570_001	Banana	extracellular	58.71	59.51
Bra023324.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	53.89	59.12
CDY54909	Canola	cytoskeleton, cytosol, peroxisome	53.35	58.7
GSMUA_Achr2P08300_001	Banana	extracellular	57.91	58.54
TraesCS5B01G390400.1	Wheat	plastid	47.99	58.31
PGSC0003DMT400014547	Potato	extracellular	57.1	57.88
TraesCS2B01G369700.1	Wheat	endoplasmic reticulum, golgi	58.71	57.78
AT5G11420.1	Thale cress	extracellular, golgi, vacuole	56.03	57.1
CDX91217	Canola	extracellular	55.76	56.83
TraesCS2B01G369500.1	Wheat	cytosol	54.42	56.7
AT5G25460.1	Thale cress	endoplasmic reticulum, extracellular	56.03	56.64
PGSC0003DMT400074806	Potato	extracellular	56.3	56.6
CDX85713	Canola	extracellular	55.5	56.56
VIT_04s0008g05010.t01	Wine grape	extracellular, golgi	55.76	56.52
Solyc03g120040.2.1	Tomato	extracellular, nucleus	38.87	56.2
Solyc08g067030.2.1	Tomato	extracellular	55.76	56.06
Bra011349.1-P	Field mustard	golgi	54.69	55.89
CDX75247	Canola	golgi	54.69	55.89
PGSC0003DMT400073388	Potato	mitochondrion	55.5	55.8
Bra020500.1-P	Field mustard	extracellular	54.69	55.74
KRH05109	Soybean	nucleus	54.69	55.74
KRH16010	Soybean	nucleus	54.69	55.74
CDY05493	Canola	extracellular	54.69	55.74
CDX80511	Canola	extracellular	54.69	55.59
Bra009841.1-P	Field mustard	extracellular	54.69	55.59
CDX88180	Canola	extracellular	54.69	55.59
PGSC0003DMT400073682	Potato	cytosol	49.87	55.52
CDY19801	Canola	extracellular	54.96	55.41
Solyc06g067910.2.1	Tomato	nucleus	55.23	55.38
TraesCS6B01G207200.1	Wheat	extracellular	55.5	55.35
CDX68849	Canola	golgi	54.16	55.34
AT4G32460.1	Thale cress	endoplasmic reticulum, golgi	53.62	54.79
CDX97108	Canola	golgi	53.62	54.64
TraesCS2B01G369300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	54.42	53.56
KRH52489	Soybean	extracellular, golgi	52.55	52.97
Solyc12g042930.1.1	Tomato	endoplasmic reticulum, golgi	53.62	52.63
KRH52488	Soybean	extracellular	51.47	52.6
KRH23537	Soybean	nucleus	52.55	52.41
KRH09784	Soybean	nucleus	52.55	52.41
TraesCS2B01G440300.1	Wheat	extracellular	53.89	52.34
VIT_09s0002g05930.t01	Wine grape	endoplasmic reticulum, extracellular	55.5	51.11
KRH44408	Soybean	golgi	50.94	43.48
CDX80516	Canola	plastid	35.66	43.46
TraesCS3B01G328900.1	Wheat	plasma membrane	39.95	37.82

Protein Annotations

EnsemblPlants:TraesCS2B01G455800.1	EnsemblPlantsGene:TraesCS2B01G455800	Gene3D:2.60.120.260	InterPro:DUF642	InterPro:Galactose-bd-like_sf	InterPro:IPR008979
PANTHER:PTHR31265	PANTHER:PTHR31265:SF8	PFAM:PF04862	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF49785
TMHMM:TMhelix	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr2B:+:650353345..650354632

Molecular Weight (calculated)

40148.0 Da

IEP (calculated)

6.953

GRAVY (calculated)

0.043

Length

373 amino acids

Sequence
(BLAST)

001: MARSTRSLAF FVLVAVAVRT ISAVTDGLLP NGDFAQGPDK SEMNGTVVTA RHAIPCWEIS GFVEYIEPGH KEEDMILALP AGASAVRLGN DATIRQQLNV
101: TRHMFYSVSF MAARSCAQAE KLNVSVDPEF GVLPIQTVYT STGWDTYSWA FKARHGTGWL SIHNTGVEED PACGPLVIAV AIKTLYAPHH TKGNMLRNGD
201: FEQGPYIFPG TLWGVLLPPI TEDVHSPLSG WMVMSDTKVV KYVDAPHHAV PRGARAVELV AGRESALVQE VRTVPGRTYR LSFAVGDAAN GCSGSLVVEA
301: YAGRGTLRVP YESLGTGGST PAALEFTAVG NETRVVFQSS NHLMKSDATL CGPVVDDVLL VPVRAHAARR FRL

Best Arabidopsis Sequence Match ( AT4G32460.1 )
(BLAST)

001: MKEMGVIVLL LLHSFFYVAF CFNDGLLPNG DFELGPRHSD MKGTQVINIT AIPNWELSGF VEYIPSGHKQ GDMILVVPKG AFAVRLGNEA SIKQKISVKK
101: GSYYSITFSA ARTCAQDERL NVSVAPHHAV MPIQTVYSSS GWDLYSWAFK AQSDYADIVI HNPGVEEDPA CGPLIDGVAM RALFPPRPTN KNILKNGGFE
201: EGPWVLPNIS SGVLIPPNSI DDHSPLPGWM VESLKAVKYI DSDHFSVPQG RRAVELVAGK ESAVAQVVRT IPGKTYVLSF SVGDASNACA GSMIVEAFAG
301: KDTIKVPYES KGKGGFKRSS LRFVAVSSRT RVMFYSTFYA MRNDDFSSLC GPVIDDVKLL SARRP

Arabidopsis Description

At4g32460 [Source:UniProtKB/TrEMBL;Acc:Q8LAR0]
SUBAcon: [golgi,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.