Factsheet for PGSC0003DMT400073388

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

mitochondrion: 24351685

msms PMID: 24351685 doi

F Salvato, JF Havelund, M Chen, RS Rao, A Rogowska-Wrzesinska, ON Jensen, DR Gang, JJ Thelen, IM Møller

Department of Biochemistry and Interdisciplinary Plant Group, University of Missouri, Columbia, Missouri 65211.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g067910.2.1	Tomato	nucleus	98.11	97.85
PGSC0003DMT400073682	Potato	cytosol	73.85	81.79
PGSC0003DMT400014547	Potato	extracellular	80.32	80.98
KRH09784	Soybean	nucleus	69.81	69.25
KRH23537	Soybean	nucleus	69.0	68.45
VIT_09s0002g05930.t01	Wine grape	endoplasmic reticulum, extracellular	73.05	66.91
GSMUA_Achr1P14570_001	Banana	extracellular	65.77	66.3
GSMUA_Achr7P08400_001	Banana	endoplasmic reticulum, extracellular, vacuole	64.96	65.67
GSMUA_Achr2P08300_001	Banana	extracellular	64.96	65.31
GSMUA_Achr2P17020_001	Banana	endoplasmic reticulum, vacuole	63.88	64.58
PGSC0003DMT400074806	Potato	extracellular	62.8	62.8
TraesCS7B01G353600.2	Wheat	extracellular	59.84	60.0
TraesCS7A01G453100.1	Wheat	golgi	59.3	59.46
HORVU6Hr1G037000.1	Barley	extracellular	59.84	59.36
OQU87155	Sorghum	golgi	59.84	59.2
TraesCS7D01G442500.1	Wheat	golgi	59.03	59.19
TraesCS6A01G177500.1	Wheat	extracellular	59.57	59.09
Os01t0611000-01	Rice	extracellular	59.3	58.98
TraesCS6B01G207200.1	Wheat	extracellular	59.3	58.82
KXG29757	Sorghum	golgi	58.76	58.6
TraesCS6D01G166800.1	Wheat	extracellular, golgi, vacuole	53.37	58.24
Os02t0205200-01	Rice	mitochondrion, nucleus, plastid	56.6	57.53
Zm00001d044455_P001	Maize	plasma membrane	59.03	57.48
EES11052	Sorghum	mitochondrion	57.14	55.94
TraesCS2D01G432500.1	Wheat	extracellular, golgi	55.8	55.5
TraesCS2B01G455800.1	Wheat	golgi	55.8	55.5
Zm00001d003186_P001	Maize	extracellular	56.6	55.41
KRH44408	Soybean	golgi	65.23	55.38
Os04t0494950-01	Rice	extracellular, vacuole	55.53	55.38
TraesCS2A01G434700.1	Wheat	golgi	55.53	55.23
TraesCS2B01G369800.1	Wheat	extracellular	55.8	55.2
Os04t0494900-01	Rice	extracellular	55.8	54.91
TraesCS2A01G351600.1	Wheat	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	55.8	54.91
HORVU2Hr1G085440.1	Barley	extracellular	55.8	54.76
TraesCS2D01G349800.1	Wheat	mitochondrion	55.53	54.64
TraesCS2B01G369900.1	Wheat	extracellular	53.64	54.52
TraesCS2D01G349900.1	Wheat	extracellular	53.64	54.52
Os04t0494600-01	Rice	extracellular	55.26	54.38
TraesCS2A01G351700.1	Wheat	extracellular	53.37	54.25
Zm00001d003183_P001	Maize	extracellular, mitochondrion, plasma membrane, plastid	55.53	54.21
OQU81862	Sorghum	cytosol, endoplasmic reticulum, golgi, mitochondrion	56.87	53.83
Os04t0495000-00	Rice	extracellular, golgi, vacuole	53.1	52.81
TraesCS5B01G390400.1	Wheat	plastid	43.4	52.44
EES11054	Sorghum	extracellular, vacuole	53.37	52.38
KXG26630	Sorghum	extracellular	53.64	52.37
Zm00001d003184_P001	Maize	endoplasmic reticulum, extracellular, mitochondrion, peroxisome	50.67	52.37
EES11053	Sorghum	endoplasmic reticulum, extracellular, vacuole	53.1	52.25
TraesCS5A01G385400.1	Wheat	extracellular	53.1	52.25
TraesCS5D01G395400.1	Wheat	extracellular	53.1	52.12
TraesCS2B01G369700.1	Wheat	endoplasmic reticulum, golgi	53.1	51.98
TraesCS2D01G349700.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	53.1	51.98
PGSC0003DMT400017671	Potato	extracellular	51.21	51.77
TraesCS2A01G351500.1	Wheat	extracellular, golgi	52.83	51.72
HORVU2Hr1G085430.1	Barley	endoplasmic reticulum, golgi	52.29	51.32
TraesCS2B01G369500.1	Wheat	cytosol	49.33	51.12
HORVU5Hr1G094750.2	Barley	extracellular	52.56	50.52
TraesCS2A01G351400.1	Wheat	extracellular	51.21	50.4
TraesCS2D01G349500.1	Wheat	extracellular	50.67	49.87
Os02t0527500-00	Rice	plastid	17.52	49.62
TraesCS2A01G351200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	50.67	49.6
TraesCS2D01G349200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	50.4	49.34
TraesCS2B01G369300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	50.13	49.08
Zm00001d003187_P002	Maize	endoplasmic reticulum, plasma membrane	52.02	48.61
TraesCS2B01G440300.1	Wheat	extracellular	49.6	47.92
TraesCS2A01G421300.1	Wheat	extracellular	49.33	47.53
KXG26629	Sorghum	golgi	51.48	46.14
Zm00001d025754_P001	Maize	golgi	50.67	46.08
HORVU2Hr1G085370.2	Barley	endoplasmic reticulum	46.63	45.53
PGSC0003DMT400054520	Potato	endoplasmic reticulum, vacuole	45.82	43.48
HORVU2Hr1G085340.2	Barley	mitochondrion, plastid	51.21	38.0
Zm00001d015715_P001	Maize	plasma membrane	58.76	37.2
PGSC0003DMT400081713	Potato	endoplasmic reticulum, extracellular, plasma membrane	20.49	37.07
HORVU2Hr1G085520.2	Barley	extracellular	32.61	33.15
Os03t0328501-00	Rice	plastid	27.76	33.12
Zm00001d003185_P001	Maize	extracellular	54.72	29.34
Os04t0494800-01	Rice	extracellular	19.95	19.53
Os07t0132600-00	Rice	mitochondrion, nucleus, plastid	18.33	18.63

Protein Annotations

EnsemblPlants:PGSC0003DMT400073388	EnsemblPlantsGene:PGSC0003DMG400028517	EntrezGene:102589576	InterPro:DUF642	PANTHER:PTHR31265	PANTHER:PTHR31265:SF9
PFAM:PF04862	PGSC:PGSC0003DMG400028517	RefSeq:XP_006356190.1	SignalP:SignalP-noTM	UniParc:UPI000296D7CC	UniProt:M1CRY2
MapMan:35.2	:	:	:	:	:

Description

Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400028517]

Coordinates

chr6:-:49661303..49665237

Molecular Weight (calculated)

40942.3 Da

IEP (calculated)

8.550

GRAVY (calculated)

-0.209

Length

371 amino acids

Sequence
(BLAST)

001: MKKAAILLVL LFATVANSSQ KDGLLSNGNF ELGPKPSQMK GTKVVDRHAI PNWEISGYVE YIKSGQTQGD MLLPVPQGDY AVRLGEDASI KTKVKLTKGV
101: FYSISFVFAR TCAQEEKLNV SVSPNSEPND WGILPLQTMY SSEGWDSYSW GFLAEADEID IVIHNPAVEK DPACGPLIDF VALKALKTPK RPRGNMLKNG
201: NFEVGPYIFP NTTWGVLIPP NIEDDHSPLL GWMIESLKAV KYIDSEHFHV PEGKRAVELV AGRESALAQV VRTRPGKIYD LLFSIGDASN SCEGSMLVEA
301: FAGKITMQFP YESKGKGGFK RARLRFTAIS PRTRVRFLST YYHMKSDNSG SLCGPVVDDV RLVGVRNPHL P

Best Arabidopsis Sequence Match ( AT5G11420.1 )
(BLAST)

001: MKGGSLSFLF VLLIATITSV ICFSDGMLPN GDFELGPKPS DMKGTQVINK KAIPSWELSG FVEYIKSGQK QGDMLLVVPA GKFAIRLGNE ASIKQRLNVT
101: KGMYYSLTFS AARTCAQDER LNISVAPDSG VIPIQTVYSS SGWDLYAWAF QAESNVAEIV IHNPGEEEDP ACGPLIDGVA IKALYPPRPT NKNILKNGGF
201: EEGPYVLPNA TTGVLVPPFI EDDHSPLPAW MVESLKAIKY VDVEHFSVPQ GRRAVELVAG KESAIAQVAR TVVGKTYVLS FAVGDANNAC QGSMVVEAFA
301: GKDTLKVPYE SRGKGGFKRA SLRFVAVSTR TRVMFYSTFY SMRSDDFSSL CGPVIDDVKL LSARKP

Arabidopsis Description

Uncharacterized protein At5g11420 [Source:UniProtKB/TrEMBL;Acc:Q9LYE7]
SUBAcon: [golgi,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.