Factsheet for TraesCS2A01G351700.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
golgi 4
plasma membrane 4
endoplasmic reticulum 5
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G349900.1	Wheat	extracellular	94.52	94.52
TraesCS2B01G369900.1	Wheat	extracellular	93.42	93.42
TraesCS2A01G434700.1	Wheat	golgi	72.33	70.78
EES11053	Sorghum	endoplasmic reticulum, extracellular, vacuole	65.21	63.13
Os04t0495000-00	Rice	extracellular, golgi, vacuole	64.38	63.0
TraesCS2A01G351600.1	Wheat	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	64.11	62.07
HORVU2Hr1G085520.2	Barley	extracellular	59.73	59.73
TraesCS7A01G453100.1	Wheat	golgi	59.45	58.65
GSMUA_Achr1P14570_001	Banana	extracellular	57.26	56.79
GSMUA_Achr2P08300_001	Banana	extracellular	56.99	56.37
TraesCS2A01G351500.1	Wheat	extracellular, golgi	57.81	55.67
TraesCS2A01G351400.1	Wheat	extracellular	56.99	55.17
Solyc03g120040.2.1	Tomato	extracellular, nucleus	38.9	55.04
TraesCS5A01G385400.1	Wheat	extracellular	56.44	54.64
Bra023324.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	50.14	53.82
PGSC0003DMT400014547	Potato	extracellular	54.25	53.8
Solyc06g067910.2.1	Tomato	nucleus	54.52	53.49
PGSC0003DMT400073388	Potato	mitochondrion	54.25	53.37
CDX75247	Canola	golgi	53.15	53.15
Bra011349.1-P	Field mustard	golgi	53.15	53.15
PGSC0003DMT400073682	Potato	cytosol	48.77	53.13
VIT_04s0008g05010.t01	Wine grape	extracellular, golgi	53.42	52.99
CDX68849	Canola	golgi	52.88	52.88
CDY54909	Canola	cytoskeleton, cytosol, peroxisome	49.04	52.8
AT4G32460.1	Thale cress	endoplasmic reticulum, golgi	52.6	52.6
KRH05109	Soybean	nucleus	52.33	52.19
Bra020500.1-P	Field mustard	extracellular	51.78	51.64
KRH16010	Soybean	nucleus	51.78	51.64
CDX91217	Canola	extracellular	51.78	51.64
CDX85713	Canola	extracellular	51.78	51.64
CDY05493	Canola	extracellular	51.78	51.64
AT5G11420.1	Thale cress	extracellular, golgi, vacuole	51.51	51.37
CDX97108	Canola	golgi	51.51	51.37
TraesCS6A01G177500.1	Wheat	extracellular	52.6	51.34
TraesCS2A01G351200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	53.15	51.19
PGSC0003DMT400074806	Potato	extracellular	51.78	50.94
Solyc08g067030.2.1	Tomato	extracellular	51.51	50.67
TraesCS2A01G421300.1	Wheat	extracellular	53.42	50.65
CDY19801	Canola	extracellular	51.23	50.54
KRH09784	Soybean	nucleus	51.78	50.53
CDX88180	Canola	extracellular	50.68	50.41
CDX80511	Canola	extracellular	50.68	50.41
Bra009841.1-P	Field mustard	extracellular	50.68	50.41
AT5G25460.1	Thale cress	endoplasmic reticulum, extracellular	50.96	50.41
KRH23537	Soybean	nucleus	51.51	50.27
Solyc12g042930.1.1	Tomato	endoplasmic reticulum, golgi	52.33	50.26
KRH52489	Soybean	extracellular, golgi	50.68	50.0
KRH52488	Soybean	extracellular	49.32	49.32
VIT_09s0002g05930.t01	Wine grape	endoplasmic reticulum, extracellular	53.42	48.15
KRH44408	Soybean	golgi	48.49	40.5
CDX80516	Canola	plastid	31.78	37.91
TraesCS3A01G294300.1	Wheat	extracellular, golgi, plasma membrane	39.45	36.46
TraesCS5A01G458700.1	Wheat	extracellular, golgi	42.19	35.65

Protein Annotations

EnsemblPlants:TraesCS2A01G351700.1	EnsemblPlantsGene:TraesCS2A01G351700	Gene3D:2.60.120.260	InterPro:DUF642	InterPro:Galactose-bd-like_sf	InterPro:IPR008979
PANTHER:PTHR31265	PANTHER:PTHR31265:SF8	PFAM:PF04862	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF49785
TMHMM:TMhelix	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr2A:+:592090270..592092514

Molecular Weight (calculated)

40088.4 Da

IEP (calculated)

7.947

GRAVY (calculated)

0.008

Length

365 amino acids

Sequence
(BLAST)

001: MATSMRWIAL FLLVAVSALA VSAIIEDGLL PNGDFRNGPD KSQMKGPVLT GKHAIPNWEL SGFVEYIESG HTQADMMLPV PVGANAVRLG NDATIRQQLK
101: VARHTYYSIS FIAARSCAQE EKLNVSVDPE FGLLPIQTVY TNTGWDTYSW AFKPRHTTVW LSIHNTGIEE NPACGPLIIA VAIKTLYPQL YNKGNMVKNG
201: DFEQGPYIFP NTPWGVLMPP IFEDVHSPLP WWMIMSDTKV VKYIDAQHHA VPKGARAVEL VAGVEVALVQ EVLGTVPGRS YRLTFSVGDA RNGCVGSLGV
301: DVYAARERLR VSYVSRGTGG HKCGKLEFTA IADKTRVVFQ SSNHHTVNAT LCGPVVDDVW LVRLK

Best Arabidopsis Sequence Match ( AT1G80240.1 )
(BLAST)

001: MMYQEAALLL ALLFISSNVV LSAPVRDGLL PNGNFELGPK PSQMKGSVVK ERTAVPNWNI IGFVEFIKSG QKQDDMVLVV PQGSSAVRLG NEASISQKIS
101: VLPGRLYSIT FSAARTCAQD ERLNISVTHE SGVIPIQTMY GSDGWDSYSW AFKAGGPEIE IRFHNPGVEE HPACGPLIDA VAIKALFPPR FSGYNLIKNG
201: NFEEGPYVFP TAKWGVLIPP FIEDDNSPLP GWMIESLKAV KYVDKAHFAV PEGHRAIELV GGKESAISQI VRTSLNKFYA LTFNVGDARD GCEGPMIVEA
301: FAGQGKVMVD YASKGKGGFR RGRLVFKAVS ARTRVTFLST FYHMKSDHSG SLCGPVIDDV RLVAVGKLRG

Arabidopsis Description

At1g80240 [Source:UniProtKB/TrEMBL;Acc:Q9SSB7]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.