Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 6
- golgi 6
- extracellular 5
- vacuole 4
- plasma membrane 4
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX68849 | Canola | golgi | 92.6 | 92.6 |
| Bra011349.1-P | Field mustard | golgi | 92.33 | 92.33 |
| CDX75247 | Canola | golgi | 92.33 | 92.33 |
| AT5G11420.1 | Thale cress | extracellular, golgi, vacuole | 78.63 | 78.42 |
| AT5G25460.1 | Thale cress | endoplasmic reticulum, extracellular | 77.81 | 76.96 |
| VIT_04s0008g05010.t01 | Wine grape | extracellular, golgi | 76.44 | 75.82 |
| KRH16010 | Soybean | nucleus | 73.42 | 73.22 |
| KRH05109 | Soybean | nucleus | 73.42 | 73.22 |
| GSMUA_Achr1P14570_001 | Banana | extracellular | 69.32 | 68.75 |
| GSMUA_Achr2P08300_001 | Banana | extracellular | 69.04 | 68.29 |
| KRH52488 | Soybean | extracellular | 67.67 | 67.67 |
| Solyc08g067030.2.1 | Tomato | extracellular | 67.95 | 66.85 |
| PGSC0003DMT400074806 | Potato | extracellular | 67.95 | 66.85 |
| KRH52489 | Soybean | extracellular, golgi | 67.12 | 66.22 |
| GSMUA_Achr7P08400_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 66.3 | 65.94 |
| GSMUA_Achr2P17020_001 | Banana | endoplasmic reticulum, vacuole | 65.75 | 65.4 |
| TraesCS7B01G353600.2 | Wheat | extracellular | 64.93 | 64.05 |
| TraesCS7A01G453100.1 | Wheat | golgi | 64.38 | 63.51 |
| TraesCS6B01G207200.1 | Wheat | extracellular | 64.93 | 63.37 |
| TraesCS7D01G442500.1 | Wheat | golgi | 64.11 | 63.24 |
| TraesCS6A01G177500.1 | Wheat | extracellular | 64.66 | 63.1 |
| HORVU6Hr1G037000.1 | Barley | extracellular | 64.66 | 63.1 |
| Os01t0611000-01 | Rice | extracellular | 64.38 | 63.0 |
| AT1G80240.1 | Thale cress | endoplasmic reticulum | 63.01 | 62.16 |
| KXG29757 | Sorghum | golgi | 63.29 | 62.1 |
| Os02t0205200-01 | Rice | mitochondrion, nucleus, plastid | 61.92 | 61.92 |
| TraesCS6D01G166800.1 | Wheat | extracellular, golgi, vacuole | 57.26 | 61.47 |
| OQU87155 | Sorghum | golgi | 62.74 | 61.07 |
| Zm00001d044455_P001 | Maize | plasma membrane | 61.92 | 59.32 |
| Os04t0494600-01 | Rice | extracellular | 57.81 | 55.97 |
| Os04t0494950-01 | Rice | extracellular, vacuole | 56.44 | 55.38 |
| Zm00001d003183_P001 | Maize | extracellular, mitochondrion, plasma membrane, plastid | 56.71 | 54.47 |
| Zm00001d003186_P001 | Maize | extracellular | 56.16 | 54.09 |
| TraesCS5B01G390400.1 | Wheat | plastid | 45.48 | 54.07 |
| TraesCS5D01G395400.1 | Wheat | extracellular | 55.89 | 53.97 |
| TraesCS2B01G369800.1 | Wheat | extracellular | 55.34 | 53.87 |
| EES11054 | Sorghum | extracellular, vacuole | 55.62 | 53.7 |
| TraesCS2B01G455800.1 | Wheat | golgi | 54.79 | 53.62 |
| TraesCS2A01G351600.1 | Wheat | endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole | 55.34 | 53.58 |
| TraesCS2B01G369900.1 | Wheat | extracellular | 53.42 | 53.42 |
| TraesCS2D01G432500.1 | Wheat | extracellular, golgi | 54.52 | 53.35 |
| TraesCS5A01G385400.1 | Wheat | extracellular | 55.07 | 53.32 |
| EES11052 | Sorghum | mitochondrion | 55.34 | 53.3 |
| HORVU2Hr1G085440.1 | Barley | extracellular | 55.07 | 53.17 |
| AT3G08030.1 | Thale cress | extracellular | 53.15 | 53.15 |
| TraesCS2D01G349900.1 | Wheat | extracellular | 53.15 | 53.15 |
| TraesCS2A01G434700.1 | Wheat | golgi | 54.25 | 53.08 |
| TraesCS2D01G349800.1 | Wheat | mitochondrion | 54.79 | 53.05 |
| Os04t0494900-01 | Rice | extracellular | 54.79 | 53.05 |
| AT2G41800.1 | Thale cress | extracellular, vacuole | 53.7 | 52.97 |
| Os04t0495000-00 | Rice | extracellular, golgi, vacuole | 53.97 | 52.81 |
| TraesCS2B01G369500.1 | Wheat | cytosol | 51.78 | 52.79 |
| Os02t0527500-00 | Rice | plastid | 18.9 | 52.67 |
| TraesCS2A01G351700.1 | Wheat | extracellular | 52.6 | 52.6 |
| OQU81862 | Sorghum | cytosol, endoplasmic reticulum, golgi, mitochondrion | 56.16 | 52.3 |
| HORVU5Hr1G094750.2 | Barley | extracellular | 55.07 | 52.07 |
| TraesCS2B01G369700.1 | Wheat | endoplasmic reticulum, golgi | 53.7 | 51.72 |
| Zm00001d003184_P001 | Maize | endoplasmic reticulum, extracellular, mitochondrion, peroxisome | 50.68 | 51.53 |
| TraesCS2A01G351400.1 | Wheat | extracellular | 53.15 | 51.46 |
| TraesCS2D01G349700.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion | 53.42 | 51.45 |
| KXG26630 | Sorghum | extracellular | 53.42 | 51.32 |
| EES11053 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 52.88 | 51.19 |
| TraesCS2D01G349500.1 | Wheat | extracellular | 52.6 | 50.93 |
| AT2G41810.1 | Thale cress | extracellular, vacuole | 51.23 | 50.54 |
| HORVU2Hr1G085430.1 | Barley | endoplasmic reticulum, golgi | 52.33 | 50.53 |
| TraesCS2A01G351500.1 | Wheat | extracellular, golgi | 52.33 | 50.4 |
| TraesCS2B01G440300.1 | Wheat | extracellular | 51.51 | 48.96 |
| TraesCS2A01G421300.1 | Wheat | extracellular | 51.23 | 48.57 |
| TraesCS2D01G349200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 48.49 | 46.7 |
| TraesCS2B01G369300.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 48.49 | 46.7 |
| TraesCS2A01G351200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 48.49 | 46.7 |
| KXG26629 | Sorghum | golgi | 51.78 | 45.65 |
| Zm00001d003187_P002 | Maize | endoplasmic reticulum, plasma membrane | 49.59 | 45.59 |
| AT2G34510.1 | Thale cress | vacuole | 49.59 | 45.14 |
| Zm00001d025754_P001 | Maize | golgi | 49.86 | 44.61 |
| HORVU2Hr1G085370.2 | Barley | endoplasmic reticulum | 45.21 | 43.42 |
| AT1G29980.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 48.22 | 43.24 |
| HORVU2Hr1G085340.2 | Barley | mitochondrion, plastid | 53.15 | 38.8 |
| Zm00001d015715_P001 | Maize | plasma membrane | 61.92 | 38.57 |
| HORVU2Hr1G085520.2 | Barley | extracellular | 33.42 | 33.42 |
| Os03t0328501-00 | Rice | plastid | 26.85 | 31.51 |
| Zm00001d003185_P001 | Maize | extracellular | 56.44 | 29.77 |
| AT5G14150.2 | Thale cress | extracellular, plasma membrane, vacuole | 30.96 | 29.5 |
| Os04t0494800-01 | Rice | extracellular | 20.0 | 19.26 |
| Os07t0132600-00 | Rice | mitochondrion, nucleus, plastid | 17.81 | 17.81 |
Protein Annotations
| Gene3D:2.60.120.260 | MapMan:35.2 | EntrezGene:829381 | UniProt:A0A178V5J0 | ProteinID:AEE86063.1 | ProteinID:AEE86064.1 |
| ArrayExpress:AT4G32460 | EnsemblPlantsGene:AT4G32460 | RefSeq:AT4G32460 | TAIR:AT4G32460 | RefSeq:AT4G32460-TAIR-G | EnsemblPlants:AT4G32460.1 |
| TAIR:AT4G32460.1 | EMBL:AY087668 | Unigene:At.24424 | EMBL:BT025248 | InterPro:DUF642 | GO:GO:0000003 |
| GO:GO:0005575 | GO:GO:0005618 | GO:GO:0005623 | GO:GO:0005975 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009505 | GO:GO:0009790 | GO:GO:0009791 | GO:GO:0009793 |
| GO:GO:0009987 | GO:GO:0030312 | GO:GO:0045489 | InterPro:Galactose-bd-like_sf | InterPro:IPR008979 | RefSeq:NP_567894.1 |
| RefSeq:NP_974661.1 | ProteinID:OAP00928.1 | PFAM:PF04862 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000263 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR31265 | PANTHER:PTHR31265:SF23 | UniProt:Q8LAR0 | SUPFAM:SSF49785 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000009D63F | : | : | : |
Description
At4g32460 [Source:UniProtKB/TrEMBL;Acc:Q8LAR0]
Coordinates
chr4:-:15662799..15665032
Molecular Weight (calculated)
39820.9 Da
IEP (calculated)
8.201
GRAVY (calculated)
-0.022
Length
365 amino acids
Sequence
(BLAST)
(BLAST)
001: MKEMGVIVLL LLHSFFYVAF CFNDGLLPNG DFELGPRHSD MKGTQVINIT AIPNWELSGF VEYIPSGHKQ GDMILVVPKG AFAVRLGNEA SIKQKISVKK
101: GSYYSITFSA ARTCAQDERL NVSVAPHHAV MPIQTVYSSS GWDLYSWAFK AQSDYADIVI HNPGVEEDPA CGPLIDGVAM RALFPPRPTN KNILKNGGFE
201: EGPWVLPNIS SGVLIPPNSI DDHSPLPGWM VESLKAVKYI DSDHFSVPQG RRAVELVAGK ESAVAQVVRT IPGKTYVLSF SVGDASNACA GSMIVEAFAG
301: KDTIKVPYES KGKGGFKRSS LRFVAVSSRT RVMFYSTFYA MRNDDFSSLC GPVIDDVKLL SARRP
101: GSYYSITFSA ARTCAQDERL NVSVAPHHAV MPIQTVYSSS GWDLYSWAFK AQSDYADIVI HNPGVEEDPA CGPLIDGVAM RALFPPRPTN KNILKNGGFE
201: EGPWVLPNIS SGVLIPPNSI DDHSPLPGWM VESLKAVKYI DSDHFSVPQG RRAVELVAGK ESAVAQVVRT IPGKTYVLSF SVGDASNACA GSMIVEAFAG
301: KDTIKVPYES KGKGGFKRSS LRFVAVSSRT RVMFYSTFYA MRNDDFSSLC GPVIDDVKLL SARRP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.