Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 4
- golgi 4
- extracellular 5
- plastid 2
- vacuole 4
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY14785 | Canola | extracellular, vacuole | 87.57 | 87.57 |
| CDX79913 | Canola | cytosol | 50.27 | 87.32 |
| CDY48764 | Canola | cytosol | 46.76 | 86.07 |
| Bra016917.1-P | Field mustard | extracellular | 86.22 | 85.29 |
| Bra004650.1-P | Field mustard | extracellular | 84.86 | 84.64 |
| CDY06908 | Canola | extracellular | 85.14 | 84.22 |
| AT2G41810.1 | Thale cress | extracellular, vacuole | 79.19 | 79.19 |
| VIT_08s0007g08460.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 63.78 | 64.31 |
| Solyc04g015610.2.1 | Tomato | extracellular | 60.0 | 60.16 |
| GSMUA_Achr9P25300_001 | Banana | extracellular, vacuole | 58.38 | 59.5 |
| AT3G08030.1 | Thale cress | extracellular | 57.84 | 58.63 |
| Solyc04g015620.2.1 | Tomato | plastid | 57.57 | 57.57 |
| PGSC0003DMT400081713 | Potato | endoplasmic reticulum, extracellular, plasma membrane | 31.89 | 57.56 |
| EER93244 | Sorghum | extracellular, vacuole | 56.22 | 53.89 |
| AT4G32460.1 | Thale cress | endoplasmic reticulum, golgi | 52.97 | 53.7 |
| AT5G11420.1 | Thale cress | extracellular, golgi, vacuole | 52.16 | 52.73 |
| Os03t0807700-01 | Rice | plastid | 55.68 | 52.42 |
| AT5G25460.1 | Thale cress | endoplasmic reticulum, extracellular | 52.16 | 52.3 |
| TraesCS5D01G469800.1 | Wheat | extracellular, vacuole | 54.32 | 50.63 |
| Zm00001d034547_P002 | Maize | extracellular, vacuole | 56.22 | 50.24 |
| AT1G80240.1 | Thale cress | endoplasmic reticulum | 49.19 | 49.19 |
| GSMUA_Achr6P29630_001 | Banana | cytosol, plastid | 41.08 | 48.1 |
| HORVU5Hr1G109880.2 | Barley | golgi, vacuole | 54.05 | 47.96 |
| TraesCS5A01G458700.1 | Wheat | extracellular, golgi | 54.32 | 46.53 |
| Os07t0206900-01 | Rice | cytosol, peroxisome | 10.54 | 39.8 |
| AT1G29980.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 42.7 | 38.82 |
| AT2G34510.1 | Thale cress | vacuole | 41.89 | 38.65 |
| AT5G14150.2 | Thale cress | extracellular, plasma membrane, vacuole | 30.0 | 28.98 |
Protein Annotations
| MapMan:35.2 | EntrezGene:818779 | ProteinID:AAC02768.1 | ProteinID:AEC10034.1 | ArrayExpress:AT2G41800 | EnsemblPlantsGene:AT2G41800 |
| RefSeq:AT2G41800 | TAIR:AT2G41800 | RefSeq:AT2G41800-TAIR-G | EnsemblPlants:AT2G41800.1 | TAIR:AT2G41800.1 | EMBL:AY070757 |
| EMBL:AY097378 | InterPro:DUF642 | GO:GO:0005575 | GO:GO:0005618 | GO:GO:0005623 | GO:GO:0005975 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009505 | GO:GO:0009506 | GO:GO:0009653 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0016049 | GO:GO:0030312 | GO:GO:0040007 | GO:GO:0051511 | GO:GO:1902066 |
| InterPro:Galactose-bd-like_sf | InterPro:IPR008979 | RefSeq:NP_181711.1 | UniProt:O22940 | PFAM:PF04862 | PO:PO:0001185 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009052 | PO:PO:0025022 | PANTHER:PTHR31265 | PANTHER:PTHR31265:SF5 | SUPFAM:SSF49785 |
| SignalP:SignalP-noTM | UniParc:UPI00000A9C94 | : | : | : | : |
Description
At2g41800/T11A7.10 [Source:UniProtKB/TrEMBL;Acc:O22940]
Coordinates
chr2:-:17436443..17438168
Molecular Weight (calculated)
40372.8 Da
IEP (calculated)
9.439
GRAVY (calculated)
0.023
Length
370 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLYHSLSIF LLLSLCHGSY SLQPRRVPHL DGILPNGNFE ITPLKSNMKG RQIIGANSLP HWEIAGHVEL VSGGPQPGGF YFPVPRGVHA VRLGNLGTIS
101: QNVRVKSGLV YSLTFGATRT CAQDENIKVS VPGQANELPL QTVFSSDGGD TYAWAFKATS DVVKVTFHNP GVQEDRTCGP LLDVVAIKEI LPLRYTRGNL
201: VKNGGFEIGP HVFANFSTGI LIPARIQDFI SPLPGWIVES LKPVKYIDRR HFKVPYGQGA VELVAGRESA IAQIIRTIAG KAYMLSFAVG DAQNGCHGSM
301: MVEAFAGREP FKLSFMSEGK GAFKTGHFRF VADSDRTRLT FYSAFYHTKL HDFGHLCGPV LDSVVVTLAR
101: QNVRVKSGLV YSLTFGATRT CAQDENIKVS VPGQANELPL QTVFSSDGGD TYAWAFKATS DVVKVTFHNP GVQEDRTCGP LLDVVAIKEI LPLRYTRGNL
201: VKNGGFEIGP HVFANFSTGI LIPARIQDFI SPLPGWIVES LKPVKYIDRR HFKVPYGQGA VELVAGRESA IAQIIRTIAG KAYMLSFAVG DAQNGCHGSM
301: MVEAFAGREP FKLSFMSEGK GAFKTGHFRF VADSDRTRLT FYSAFYHTKL HDFGHLCGPV LDSVVVTLAR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.