Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016917.1-P | Field mustard | extracellular | 97.86 | 97.86 |
| CDY14785 | Canola | extracellular, vacuole | 92.25 | 93.24 |
| CDX79913 | Canola | cytosol | 49.2 | 86.39 |
| AT2G41800.1 | Thale cress | extracellular, vacuole | 84.22 | 85.14 |
| CDY48764 | Canola | cytosol | 44.92 | 83.58 |
| CDY48765 | Canola | extracellular | 78.07 | 65.91 |
| CDX79912 | Canola | extracellular, vacuole | 78.07 | 64.89 |
| VIT_08s0007g08460.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 62.83 | 64.03 |
| GSMUA_Achr9P25300_001 | Banana | extracellular, vacuole | 57.22 | 58.95 |
| Solyc04g015610.2.1 | Tomato | extracellular | 57.75 | 58.54 |
| Solyc04g015620.2.1 | Tomato | plastid | 55.88 | 56.49 |
| CDY28002 | Canola | extracellular | 54.81 | 56.16 |
| PGSC0003DMT400081713 | Potato | endoplasmic reticulum, extracellular, plasma membrane | 30.75 | 56.1 |
| CDY22149 | Canola | extracellular | 54.55 | 55.89 |
| CDY35979 | Canola | extracellular | 54.55 | 55.89 |
| EER93244 | Sorghum | extracellular, vacuole | 54.81 | 53.11 |
| Os03t0807700-01 | Rice | plastid | 54.28 | 51.65 |
| CDX91217 | Canola | extracellular | 50.53 | 51.64 |
| CDX85713 | Canola | extracellular | 50.53 | 51.64 |
| CDX75247 | Canola | golgi | 50.27 | 51.51 |
| CDX68849 | Canola | golgi | 49.73 | 50.96 |
| CDX97108 | Canola | golgi | 49.73 | 50.82 |
| TraesCS5D01G469800.1 | Wheat | extracellular, vacuole | 53.74 | 50.63 |
| CDY54909 | Canola | cytoskeleton, cytosol, peroxisome | 45.72 | 50.44 |
| Zm00001d034547_P002 | Maize | extracellular, vacuole | 54.55 | 49.28 |
| CDX80511 | Canola | extracellular | 48.13 | 49.05 |
| CDX88180 | Canola | extracellular | 48.13 | 49.05 |
| CDY19801 | Canola | extracellular | 48.13 | 48.65 |
| CDY05493 | Canola | extracellular | 47.33 | 48.36 |
| HORVU5Hr1G109880.2 | Barley | golgi, vacuole | 53.48 | 47.96 |
| CDY57694 | Canola | extracellular | 47.06 | 47.57 |
| GSMUA_Achr6P29630_001 | Banana | cytosol, plastid | 40.11 | 47.47 |
| CDY54317 | Canola | endoplasmic reticulum | 46.79 | 47.3 |
| CDX87297 | Canola | endoplasmic reticulum, extracellular | 42.78 | 46.78 |
| TraesCS5A01G458700.1 | Wheat | extracellular, golgi | 53.74 | 46.53 |
| CDY39990 | Canola | extracellular | 42.25 | 46.33 |
| CDX80516 | Canola | plastid | 33.16 | 40.52 |
| Os07t0206900-01 | Rice | cytosol, peroxisome | 10.16 | 38.78 |
| CDY17255 | Canola | plasma membrane | 38.24 | 35.75 |
| CDX84311 | Canola | plasma membrane | 38.24 | 35.75 |
| CDY26302 | Canola | extracellular, golgi, plasma membrane | 39.04 | 35.7 |
| CDX99870 | Canola | plasma membrane | 35.29 | 33.85 |
| CDX70545 | Canola | extracellular, vacuole | 29.95 | 29.32 |
| CDX78563 | Canola | extracellular, plasma membrane | 29.95 | 29.09 |
Protein Annotations
| EnsemblPlants:CDY06908 | EnsemblPlantsGene:GSBRNA2T00123196001 | InterPro:DUF642 | InterPro:Galactose-bd-like_sf | InterPro:IPR008979 | PANTHER:PTHR31265 |
| PANTHER:PTHR31265:SF5 | PFAM:PF04862 | ProteinID:CDY06908 | ProteinID:CDY06908.1 | SEG:seg | SignalP:SignalP-noTM |
| SUPFAM:SSF49785 | UniParc:UPI0004EEC7DC | MapMan:35.2 | : | : | : |
Description
BnaA04g24070D
Coordinates
chrLK031974:+:126898..128483
Molecular Weight (calculated)
41004.5 Da
IEP (calculated)
9.555
GRAVY (calculated)
-0.031
Length
374 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLYHSLCFL LLLSLCHGSH SHNRGVRPRR TPHLDGLLPN GNFEHIPLKS NMKGRQIIGT NSLPHWQISG HVELVSGGPQ PGGFYFPVPR GVHAVRLGSL
101: ASISQDVRVK RGLVYSLTFG ATRSCAQDEN IKVSVPGQAN ELPIQTVFSS DGGDTYAWAF RAMSNVVRVT FHNSGVQEDR TCGPLVDVVA IKEILPLRYN
201: QGNLVKNGGF EIGPHIFTNY STGILIPAKI QDIISPLPGW IIESLKPVKY IDERHYKVPF GLAAVELVAG RESAIAQIIR TVTGKAYMFS FTVADAQNGC
301: HGSMMVEAFA GKQPFKLPFV SEGKGAYKTG HFKFVADSNR TRLTFYSAFY HTKLHDFGHL CGPVLDSVIV LPAH
101: ASISQDVRVK RGLVYSLTFG ATRSCAQDEN IKVSVPGQAN ELPIQTVFSS DGGDTYAWAF RAMSNVVRVT FHNSGVQEDR TCGPLVDVVA IKEILPLRYN
201: QGNLVKNGGF EIGPHIFTNY STGILIPAKI QDIISPLPGW IIESLKPVKY IDERHYKVPF GLAAVELVAG RESAIAQIIR TVTGKAYMFS FTVADAQNGC
301: HGSMMVEAFA GKQPFKLPFV SEGKGAYKTG HFKFVADSNR TRLTFYSAFY HTKLHDFGHL CGPVLDSVIV LPAH
001: MSLYHSLSIF LLLSLCHGSY SLQPRRVPHL DGILPNGNFE ITPLKSNMKG RQIIGANSLP HWEIAGHVEL VSGGPQPGGF YFPVPRGVHA VRLGNLGTIS
101: QNVRVKSGLV YSLTFGATRT CAQDENIKVS VPGQANELPL QTVFSSDGGD TYAWAFKATS DVVKVTFHNP GVQEDRTCGP LLDVVAIKEI LPLRYTRGNL
201: VKNGGFEIGP HVFANFSTGI LIPARIQDFI SPLPGWIVES LKPVKYIDRR HFKVPYGQGA VELVAGRESA IAQIIRTIAG KAYMLSFAVG DAQNGCHGSM
301: MVEAFAGREP FKLSFMSEGK GAFKTGHFRF VADSDRTRLT FYSAFYHTKL HDFGHLCGPV LDSVVVTLAR
101: QNVRVKSGLV YSLTFGATRT CAQDENIKVS VPGQANELPL QTVFSSDGGD TYAWAFKATS DVVKVTFHNP GVQEDRTCGP LLDVVAIKEI LPLRYTRGNL
201: VKNGGFEIGP HVFANFSTGI LIPARIQDFI SPLPGWIVES LKPVKYIDRR HFKVPYGQGA VELVAGRESA IAQIIRTIAG KAYMLSFAVG DAQNGCHGSM
301: MVEAFAGREP FKLSFMSEGK GAFKTGHFRF VADSDRTRLT FYSAFYHTKL HDFGHLCGPV LDSVVVTLAR
Arabidopsis Description
At2g41800/T11A7.10 [Source:UniProtKB/TrEMBL;Acc:O22940]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.