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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytoskeleton, cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • cytoskeleton 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytoskeleton, cytosol, peroxisome
Any Predictor:cytoskeleton, cytosol, peroxisome
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra020500.1-P Field mustard extracellular 99.41 92.08
CDY05493 Canola extracellular 99.41 92.08
CDX80511 Canola extracellular 96.76 89.37
CDX88180 Canola extracellular 96.76 89.37
CDY19801 Canola extracellular 95.28 87.3
AT5G25460.1 Thale cress endoplasmic reticulum, extracellular 92.92 85.37
CDX91217 Canola extracellular 89.97 83.33
CDX85713 Canola extracellular 89.38 82.79
CDX97108 Canola golgi 85.25 78.96
CDX75247 Canola golgi 80.24 74.52
CDX68849 Canola golgi 79.65 73.97
VIT_04s0008g05010.t01 Wine grape extracellular, golgi 77.88 71.74
KRH05109 Soybean nucleus 75.22 69.67
KRH16010 Soybean nucleus 74.93 69.4
CDX80516 Canola plastid 61.06 67.65
Solyc08g067030.2.1 Tomato extracellular 72.57 66.31
PGSC0003DMT400074806 Potato extracellular 72.27 66.04
GSMUA_Achr1P14570_001 Banana extracellular 71.68 66.03
KRH52488 Soybean extracellular 70.8 65.75
GSMUA_Achr2P08300_001 Banana extracellular 70.8 65.04
GSMUA_Achr7P08400_001 Banana endoplasmic reticulum, extracellular, vacuole 69.62 64.31
KRH52489 Soybean extracellular, golgi 69.91 64.05
GSMUA_Achr2P17020_001 Banana endoplasmic reticulum, vacuole 69.03 63.76
CDY39990 Canola extracellular 60.18 59.82
CDX87297 Canola endoplasmic reticulum, extracellular 60.18 59.65
TraesCS7B01G353600.2 Wheat extracellular 64.9 59.46
TraesCS7D01G442500.1 Wheat golgi 64.9 59.46
Os01t0611000-01 Rice extracellular 65.19 59.25
TraesCS7A01G453100.1 Wheat golgi 64.31 58.92
HORVU6Hr1G037000.1 Barley extracellular 64.9 58.82
TraesCS6B01G207200.1 Wheat extracellular 64.9 58.82
TraesCS6A01G177500.1 Wheat extracellular 64.6 58.56
Os02t0205200-01 Rice mitochondrion, nucleus, plastid 62.83 58.36
CDY54317 Canola endoplasmic reticulum 63.42 58.11
CDY57694 Canola extracellular 63.42 58.11
KXG29757 Sorghum golgi 63.42 57.8
OQU87155 Sorghum golgi 63.72 57.6
Zm00001d044455_P001 Maize plasma membrane 64.01 56.96
TraesCS6D01G166800.1 Wheat extracellular, golgi, vacuole 55.75 55.59
Os04t0494950-01 Rice extracellular, vacuole 60.77 55.38
CDX79913 Canola cytosol 33.63 53.52
CDY28002 Canola extracellular 57.52 53.42
TraesCS2B01G455800.1 Wheat golgi 58.7 53.35
TraesCS2B01G369800.1 Wheat extracellular 59.0 53.33
CDY48764 Canola cytosol 31.56 53.23
CDY35979 Canola extracellular 57.23 53.15
TraesCS2A01G351600.1 Wheat endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 59.0 53.05
HORVU2Hr1G085440.1 Barley extracellular 59.0 52.91
TraesCS2D01G432500.1 Wheat extracellular, golgi 58.11 52.81
TraesCS2D01G349800.1 Wheat mitochondrion 58.7 52.79
CDY22149 Canola extracellular 56.64 52.6
TraesCS2A01G434700.1 Wheat golgi 57.82 52.55
Os04t0494600-01 Rice extracellular 58.41 52.52
Os02t0527500-00 Rice plastid 20.06 51.91
TraesCS5B01G390400.1 Wheat plastid 46.9 51.79
Zm00001d003183_P001 Maize extracellular, mitochondrion, plasma membrane, plastid 57.82 51.58
EES11053 Sorghum endoplasmic reticulum, extracellular, vacuole 57.23 51.46
Zm00001d003186_P001 Maize extracellular 57.23 51.19
OQU81862 Sorghum cytosol, endoplasmic reticulum, golgi, mitochondrion 59.0 51.02
Os04t0495000-00 Rice extracellular, golgi, vacuole 56.05 50.94
EES11052 Sorghum mitochondrion 56.34 50.4
EES11054 Sorghum extracellular, vacuole 56.05 50.26
Os04t0494900-01 Rice extracellular 55.75 50.13
TraesCS2B01G369500.1 Wheat cytosol 52.8 50.0
TraesCS2D01G349900.1 Wheat extracellular 53.69 49.86
TraesCS5A01G385400.1 Wheat extracellular 55.16 49.6
TraesCS2B01G369900.1 Wheat extracellular 53.39 49.59
Zm00001d003184_P001 Maize endoplasmic reticulum, extracellular, mitochondrion, peroxisome 52.51 49.58
TraesCS5D01G395400.1 Wheat extracellular 55.16 49.47
TraesCS2A01G351700.1 Wheat extracellular 52.8 49.04
KXG26630 Sorghum extracellular 54.57 48.68
TraesCS2D01G349700.1 Wheat endoplasmic reticulum, golgi, mitochondrion 54.28 48.55
TraesCS2A01G351400.1 Wheat extracellular 53.69 48.28
TraesCS2B01G369700.1 Wheat endoplasmic reticulum, golgi 53.69 48.02
HORVU5Hr1G094750.2 Barley extracellular 54.57 47.93
TraesCS2B01G440300.1 Wheat extracellular 53.98 47.66
HORVU2Hr1G085430.1 Barley endoplasmic reticulum, golgi 53.1 47.62
TraesCS2D01G349500.1 Wheat extracellular 52.51 47.21
TraesCS2A01G421300.1 Wheat extracellular 53.39 47.01
TraesCS2A01G351500.1 Wheat extracellular, golgi 52.51 46.97
CDY14785 Canola extracellular, vacuole 51.03 46.76
CDY06908 Canola extracellular 50.44 45.72
TraesCS2A01G351200.1 Wheat endoplasmic reticulum, extracellular, vacuole 50.44 45.12
TraesCS2B01G369300.1 Wheat endoplasmic reticulum, extracellular, vacuole 50.15 44.85
TraesCS2D01G349200.1 Wheat endoplasmic reticulum, extracellular, vacuole 49.85 44.59
KXG26629 Sorghum golgi 52.51 43.0
Zm00001d003187_P002 Maize endoplasmic reticulum, plasma membrane 50.15 42.82
Zm00001d025754_P001 Maize golgi 50.74 42.16
HORVU2Hr1G085370.2 Barley endoplasmic reticulum 46.31 41.32
CDY48765 Canola extracellular 52.8 40.41
CDX84311 Canola plasma membrane 47.49 40.25
CDY17255 Canola plasma membrane 47.49 40.25
CDX79912 Canola extracellular, vacuole 51.92 39.11
CDY26302 Canola extracellular, golgi, plasma membrane 46.9 38.88
CDX99870 Canola plasma membrane 42.48 36.92
Zm00001d015715_P001 Maize plasma membrane 63.72 36.86
HORVU2Hr1G085340.2 Barley mitochondrion, plastid 53.39 36.2
HORVU2Hr1G085520.2 Barley extracellular 33.04 30.68
CDX78563 Canola extracellular, plasma membrane 34.51 30.39
CDX70545 Canola extracellular, vacuole 33.04 29.32
Zm00001d003185_P001 Maize extracellular 58.7 28.76
Os03t0328501-00 Rice plastid 26.25 28.62
Os04t0494800-01 Rice extracellular 18.88 16.89
Os07t0132600-00 Rice mitochondrion, nucleus, plastid 17.7 16.44
Protein Annotations
EnsemblPlants:CDY54909EnsemblPlantsGene:GSBRNA2T00014811001Gene3D:2.60.120.260InterPro:DUF642InterPro:Galactose-bd-like_sfInterPro:IPR008979
PANTHER:PTHR31265PANTHER:PTHR31265:SF23PFAM:PF04862ProteinID:CDY54909ProteinID:CDY54909.1SUPFAM:SSF49785
UniParc:UPI0004EF25C6UniProt:A0A078IXL3MapMan:35.2:::
Description
BnaC02g48660DBnaC02g48660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IXL3]
Coordinates
chrLK033359:-:61643..63467
Molecular Weight (calculated)
36856.3 Da
IEP (calculated)
6.160
GRAVY (calculated)
-0.069
Length
339 amino acids
Sequence
(BLAST)
001: MLPNGDFELG PKPSDMKGTE VLNRMAIPNW EITGFVEYIS SGHTQGDMLL VVPAGKFAVR LGNEASIKQR LKVVKGMYYS LTFSAARTCA QDERLNISVA
101: PDSGVIPVQT VYSSSGWDLY SWAFQAESEI AEIVIHNPGE EEDPACGPLI DGIAMKALYP PRPTNKNILK NGGFEEGPLV LPGSTTGVLI PPFIEDDHSP
201: LPGWMVESLK AVKYVDTEHF SIPQGRRAIE LVAGKESAIA QVARTIIGKT YVLSFAVGDA NNACKGSMVV EAFAGRDTLK VPYESRGTGG FKRASIRFVA
301: VSTRTRVMFY STFYAMRSDD FSSLCGPVID DVKLISARK
Best Arabidopsis Sequence Match ( AT5G25460.1 )
(BLAST)
001: MEGVTVVSFF LLFIATAMAA KSTVSFRDGM LPNGDFELGP KPSDMKGTEI LNKLAIPNWE VTGFVEYIKS GHKQGDMLLV VPAGKFAVRL GNEASIKQRL
101: KVVKGMYYSL TFSAARTCAQ DERLNISVAP DSGVIPIQTV YSSSGWDLYA WAFQAESDVA EVVIHNPGVE EDPACGPLID GVAMRSLYPP RPTNKNILKN
201: GGFEEGPLVL PGSTTGVLIP PFIEDDHSPL PGWMVESLKA VKYVDVEHFS VPQGRRAIEL VAGKESAIAQ VVRTVIGKTY VLSFAVGDAN NACKGSMVVE
301: AFAGKDTLKV PYESKGTGGF KRASIRFVAV STRSRIMFYS TFYAMRSDDF SSLCGPVIDD VKLISVRKP
Arabidopsis Description
At5g25460 [Source:UniProtKB/TrEMBL;Acc:Q94F20]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.