Factsheet for Os04t0494950-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 6
plasma membrane 5
golgi 5
plastid 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	secretory
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
PTS1:	peroxisome
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G369800.1	Wheat	extracellular	74.19	73.6
TraesCS2A01G351600.1	Wheat	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	74.46	73.47
TraesCS2D01G349800.1	Wheat	mitochondrion	74.19	73.21
Os04t0495000-00	Rice	extracellular, golgi, vacuole	72.31	72.12
HORVU2Hr1G085440.1	Barley	extracellular	72.31	71.16
OQU81862	Sorghum	cytosol, endoplasmic reticulum, golgi, mitochondrion	72.31	68.62
EES11054	Sorghum	extracellular, vacuole	68.82	67.72
Os01t0611000-01	Rice	extracellular	67.47	67.29
Zm00001d003183_P001	Maize	extracellular, mitochondrion, plasma membrane, plastid	68.28	66.84
Os04t0494600-01	Rice	extracellular	66.67	65.78
GSMUA_Achr1P14570_001	Banana	extracellular	63.44	64.13
Zm00001d003184_P001	Maize	endoplasmic reticulum, extracellular, mitochondrion, peroxisome	61.56	63.79
Os04t0494900-01	Rice	extracellular	64.52	63.66
GSMUA_Achr2P08300_001	Banana	extracellular	62.9	63.41
Bra023324.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	55.65	60.88
CDY54909	Canola	cytoskeleton, cytosol, peroxisome	55.38	60.77
PGSC0003DMT400074806	Potato	extracellular	58.33	58.49
Solyc08g067030.2.1	Tomato	extracellular	58.06	58.22
VIT_04s0008g05010.t01	Wine grape	extracellular, golgi	57.26	57.88
AT5G11420.1	Thale cress	extracellular, golgi, vacuole	56.72	57.65
Os02t0205200-01	Rice	mitochondrion, nucleus, plastid	56.45	57.53
KRH05109	Soybean	nucleus	56.18	57.1
KRH16010	Soybean	nucleus	56.18	57.1
CDX85713	Canola	extracellular	55.91	56.83
PGSC0003DMT400014547	Potato	extracellular	56.18	56.79
Solyc03g120040.2.1	Tomato	extracellular, nucleus	39.25	56.59
CDY05493	Canola	extracellular	55.65	56.56
Bra020500.1-P	Field mustard	extracellular	55.65	56.56
CDX91217	Canola	extracellular	55.65	56.56
AT4G32460.1	Thale cress	endoplasmic reticulum, golgi	55.38	56.44
CDX97108	Canola	golgi	55.38	56.28
Bra009841.1-P	Field mustard	extracellular	55.38	56.13
CDX80511	Canola	extracellular	55.38	56.13
CDX88180	Canola	extracellular	55.38	56.13
CDY19801	Canola	extracellular	55.65	55.95
AT5G25460.1	Thale cress	endoplasmic reticulum, extracellular	55.38	55.83
Solyc06g067910.2.1	Tomato	nucleus	55.65	55.65
CDX68849	Canola	golgi	54.57	55.62
CDX75247	Canola	golgi	54.57	55.62
Bra011349.1-P	Field mustard	golgi	54.57	55.62
PGSC0003DMT400073388	Potato	mitochondrion	55.38	55.53
KRH23537	Soybean	nucleus	55.11	54.81
KRH09784	Soybean	nucleus	54.84	54.55
VIT_09s0002g05930.t01	Wine grape	endoplasmic reticulum, extracellular	58.33	53.58
KRH52489	Soybean	extracellular, golgi	53.23	53.51
KRH52488	Soybean	extracellular	52.42	53.42
PGSC0003DMT400073682	Potato	cytosol	47.58	52.84
Solyc12g042930.1.1	Tomato	endoplasmic reticulum, golgi	51.61	50.53
Os02t0527500-00	Rice	plastid	17.74	50.38
KRH44408	Soybean	golgi	52.42	44.62
CDX80516	Canola	plastid	35.75	43.46
Os03t0807700-01	Rice	plastid	42.47	40.2
Os01t0531400-00	Rice	cytosol	28.49	38.41
Os01t0756600-01	Rice	plasma membrane	41.13	38.35
Os03t0328501-00	Rice	plastid	31.18	37.3
Zm00001d003185_P001	Maize	extracellular	68.82	36.99
Os07t0206900-01	Rice	cytosol, peroxisome	9.41	35.71
Os04t0494800-01	Rice	extracellular	24.19	23.75
Os07t0132600-00	Rice	mitochondrion, nucleus, plastid	21.24	21.64

Protein Annotations

EnsemblPlants:Os04t0494950-01	EnsemblPlantsGene:Os04g0494950	EntrezGene:9266741	Gene3D:2.60.120.260	InterPro:DUF642	InterPro:Galactose-bd-like_sf
InterPro:IPR008979	PANTHER:PTHR31265	PANTHER:PTHR31265:SF8	PFAM:PF04862	ProteinID:BAS89877.1	ProteinID:CAE01677.2
RefSeq:XP_015635129.1	SignalP:SignalP-noTM	SUPFAM:SSF49785	UniParc:UPI000021C707	UniProt:Q7XT45	MapMan:35.2

Description

Similar to OSIGBa0103O01.12 protein. (Os04t0494950-01)

Coordinates

chr4:+:24746952..24748506

Molecular Weight (calculated)

40483.1 Da

IEP (calculated)

6.950

GRAVY (calculated)

-0.179

Length

372 amino acids

Sequence
(BLAST)

001: MTGSARSVVA LLFLLVGSAA RADSAVTDGL LPNGNFEDGP DKSQLNGTVV TGRYAILNWE ISGFVEYIES GHREQDMILA VPEGARAVRL GNDATIRQRL
101: SVTRRAYYSI TFSAARTCAQ KEKLNMSVTP EFGVLPIQTV YTSSGWDSYS WAFRAKHSVV WLSIHNPGEE EDPACGPLID SIAIKNLYPP PRTKGNMLRN
201: GDLEEGPYIF PDATWGVLVP PIFEDEHSPL PGWMIMSDTK VIKYVDSPHH RVPQGARAVE LVAGRETALV QEVATVPGRS YRLSFSVGDA GNGCKDSLAV
301: EAYAARATAK VPYESQGTGG HKRAQLEFAA VANLTRVVFQ SFNYHTKPDG TLCGPLVDDI SLVSVRKRAA RL

Best Arabidopsis Sequence Match ( AT5G25460.1 )
(BLAST)

001: MEGVTVVSFF LLFIATAMAA KSTVSFRDGM LPNGDFELGP KPSDMKGTEI LNKLAIPNWE VTGFVEYIKS GHKQGDMLLV VPAGKFAVRL GNEASIKQRL
101: KVVKGMYYSL TFSAARTCAQ DERLNISVAP DSGVIPIQTV YSSSGWDLYA WAFQAESDVA EVVIHNPGVE EDPACGPLID GVAMRSLYPP RPTNKNILKN
201: GGFEEGPLVL PGSTTGVLIP PFIEDDHSPL PGWMVESLKA VKYVDVEHFS VPQGRRAIEL VAGKESAIAQ VVRTVIGKTY VLSFAVGDAN NACKGSMVVE
301: AFAGKDTLKV PYESKGTGGF KRASIRFVAV STRSRIMFYS TFYAMRSDDF SSLCGPVIDD VKLISVRKP

Arabidopsis Description

At5g25460 [Source:UniProtKB/TrEMBL;Acc:Q94F20]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.