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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 7
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX85713 Canola extracellular 90.44 90.44
CDX91217 Canola extracellular 90.16 90.16
AT5G11420.1 Thale cress extracellular, golgi, vacuole 89.34 89.34
CDY54909 Canola cytoskeleton, cytosol, peroxisome 78.96 85.25
CDX80511 Canola extracellular 84.15 83.92
CDX88180 Canola extracellular 84.15 83.92
CDY05493 Canola extracellular 82.79 82.79
CDY19801 Canola extracellular 83.06 82.16
CDX75247 Canola golgi 77.05 77.26
CDX68849 Canola golgi 76.5 76.71
VIT_04s0008g05010.t01 Wine grape extracellular, golgi 76.5 76.09
KRH16010 Soybean nucleus 73.22 73.22
KRH05109 Soybean nucleus 72.4 72.4
PGSC0003DMT400074806 Potato extracellular 71.04 70.08
Solyc08g067030.2.1 Tomato extracellular 70.49 69.54
KRH52488 Soybean extracellular 68.58 68.77
GSMUA_Achr7P08400_001 Banana endoplasmic reticulum, extracellular, vacuole 67.21 67.03
GSMUA_Achr1P14570_001 Banana extracellular 67.21 66.85
GSMUA_Achr2P17020_001 Banana endoplasmic reticulum, vacuole 66.94 66.76
GSMUA_Achr2P08300_001 Banana extracellular 66.12 65.58
KRH52489 Soybean extracellular, golgi 66.12 65.41
TraesCS7D01G442500.1 Wheat golgi 63.93 63.24
CDX87297 Canola endoplasmic reticulum, extracellular 59.02 63.16
TraesCS7B01G353600.2 Wheat extracellular 63.66 62.97
CDY39990 Canola extracellular 58.47 62.76
Os01t0611000-01 Rice extracellular 63.93 62.73
CDY54317 Canola endoplasmic reticulum 63.39 62.7
CDY57694 Canola extracellular 63.39 62.7
KXG29757 Sorghum golgi 63.39 62.37
TraesCS7A01G453100.1 Wheat golgi 62.84 62.16
CDX80516 Canola plastid 51.64 61.76
HORVU6Hr1G037000.1 Barley extracellular 62.84 61.5
TraesCS6B01G207200.1 Wheat extracellular 62.84 61.5
TraesCS6A01G177500.1 Wheat extracellular 62.57 61.23
Os02t0205200-01 Rice mitochondrion, nucleus, plastid 60.38 60.55
OQU87155 Sorghum golgi 62.02 60.53
TraesCS6D01G166800.1 Wheat extracellular, golgi, vacuole 54.92 59.12
Zm00001d044455_P001 Maize plasma membrane 61.2 58.79
CDY48764 Canola cytosol 30.87 56.22
CDX79913 Canola cytosol 32.51 55.87
Os04t0494950-01 Rice extracellular, vacuole 56.28 55.38
Os04t0494600-01 Rice extracellular 56.83 55.17
TraesCS2B01G369800.1 Wheat extracellular 55.46 54.13
Os04t0494900-01 Rice extracellular 55.74 54.11
HORVU2Hr1G085440.1 Barley extracellular 55.74 53.97
CDY28002 Canola extracellular 53.55 53.7
TraesCS2B01G455800.1 Wheat golgi 54.64 53.62
TraesCS2D01G432500.1 Wheat extracellular, golgi 54.64 53.62
TraesCS2D01G349800.1 Wheat mitochondrion 55.19 53.58
CDY22149 Canola extracellular 53.28 53.42
CDY35979 Canola extracellular 53.28 53.42
Zm00001d003183_P001 Maize extracellular, mitochondrion, plasma membrane, plastid 55.46 53.42
TraesCS2A01G351600.1 Wheat endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 54.64 53.05
EES11052 Sorghum mitochondrion 54.92 53.03
Zm00001d003186_P001 Maize extracellular 54.64 52.77
Os02t0527500-00 Rice plastid 18.85 52.67
TraesCS2A01G434700.1 Wheat golgi 53.55 52.55
EES11053 Sorghum endoplasmic reticulum, extracellular, vacuole 54.1 52.52
TraesCS2D01G349900.1 Wheat extracellular 51.91 52.05
Os04t0495000-00 Rice extracellular, golgi, vacuole 53.01 52.01
EES11054 Sorghum extracellular, vacuole 53.55 51.85
TraesCS2A01G351700.1 Wheat extracellular 51.37 51.51
TraesCS2B01G369900.1 Wheat extracellular 51.37 51.51
TraesCS5B01G390400.1 Wheat plastid 43.17 51.47
TraesCS2B01G369500.1 Wheat cytosol 50.27 51.4
KXG26630 Sorghum extracellular 53.28 51.32
TraesCS2D01G349700.1 Wheat endoplasmic reticulum, golgi, mitochondrion 53.01 51.19
OQU81862 Sorghum cytosol, endoplasmic reticulum, golgi, mitochondrion 54.64 51.02
Zm00001d003184_P001 Maize endoplasmic reticulum, extracellular, mitochondrion, peroxisome 50.0 50.97
TraesCS2B01G369700.1 Wheat endoplasmic reticulum, golgi 52.73 50.92
CDY14785 Canola extracellular, vacuole 51.09 50.54
HORVU2Hr1G085430.1 Barley endoplasmic reticulum, golgi 52.19 50.53
TraesCS5D01G395400.1 Wheat extracellular 52.19 50.53
TraesCS2A01G351400.1 Wheat extracellular 51.64 50.13
TraesCS5A01G385400.1 Wheat extracellular 51.64 50.13
CDY06908 Canola extracellular 50.82 49.73
TraesCS2A01G351500.1 Wheat extracellular, golgi 51.37 49.6
TraesCS2D01G349500.1 Wheat extracellular 51.09 49.6
HORVU5Hr1G094750.2 Barley extracellular 50.55 47.93
TraesCS2B01G440300.1 Wheat extracellular 50.27 47.92
TraesCS2A01G421300.1 Wheat extracellular 50.27 47.79
TraesCS2B01G369300.1 Wheat endoplasmic reticulum, extracellular, vacuole 49.45 47.76
TraesCS2A01G351200.1 Wheat endoplasmic reticulum, extracellular, vacuole 49.18 47.49
TraesCS2D01G349200.1 Wheat endoplasmic reticulum, extracellular, vacuole 49.18 47.49
Zm00001d003187_P002 Maize endoplasmic reticulum, plasma membrane 48.91 45.09
KXG26629 Sorghum golgi 50.55 44.69
CDY48765 Canola extracellular 53.28 44.02
HORVU2Hr1G085370.2 Barley endoplasmic reticulum 45.63 43.95
Zm00001d025754_P001 Maize golgi 48.63 43.63
CDX79912 Canola extracellular, vacuole 53.01 43.11
CDX84311 Canola plasma membrane 45.9 42.0
CDY17255 Canola plasma membrane 45.9 42.0
CDY26302 Canola extracellular, golgi, plasma membrane 45.63 40.83
Zm00001d015715_P001 Maize plasma membrane 63.11 39.42
CDX99870 Canola plasma membrane 41.53 38.97
HORVU2Hr1G085340.2 Barley mitochondrion, plastid 50.82 37.2
HORVU2Hr1G085520.2 Barley extracellular 31.97 32.05
Os03t0328501-00 Rice plastid 26.23 30.87
CDX78563 Canola extracellular, plasma membrane 30.87 29.35
Zm00001d003185_P001 Maize extracellular 54.64 28.9
CDX70545 Canola extracellular, vacuole 30.05 28.8
Os04t0494800-01 Rice extracellular 19.13 18.47
Os07t0132600-00 Rice mitochondrion, nucleus, plastid 16.67 16.71
Protein Annotations
EnsemblPlants:CDX97108EnsemblPlantsGene:GSBRNA2T00104090001Gene3D:2.60.120.260InterPro:DUF642InterPro:Galactose-bd-like_sfInterPro:IPR008979
PANTHER:PTHR31265PANTHER:PTHR31265:SF23PFAM:PF04862ProteinID:CDX97108ProteinID:CDX97108.1SignalP:SignalP-noTM
SUPFAM:SSF49785TMHMM:TMhelixUniParc:UPI0004EDD3B1MapMan:35.2::
Description
BnaC09g45170D
Coordinates
chrLK031897:+:664030..666107
Molecular Weight (calculated)
39874.1 Da
IEP (calculated)
8.855
GRAVY (calculated)
0.012
Length
366 amino acids
Sequence
(BLAST)
001: MKRVSVSFLF ILLISTITSV FCFRDGMLPN GGFERGPKPS DMKGTRVINK NAIPNWELSG FIEYIKSGQK QGDMLLVVPA GKFAVRLGNE ASIKQRINVT
101: KGMYYSLTFS AARTCAQDER LNISVAPDSG VIPIQTLYSS NGWDLYAWAF QAQNDVAEIV IHNPGEEEHP ACGPLIDGVA IKALYPPRPT NKNILKNGGF
201: EEGPYIIPNA TTGVLIPPFI EDDHSPLPAW IIESLKAVKY VDVEHFSVPQ GRRAVELVAG KESAIAQVAR TIVGKSYVLS FAVGDANNAC KGSMIVEAFA
301: GKDTLKVAYE SNGKGGFKRA ALRFVAVSSR TRVMFYSTFY AMRSDDFSSL CGPVIDDVKL LSVGKL
Best Arabidopsis Sequence Match ( AT5G11420.1 )
(BLAST)
001: MKGGSLSFLF VLLIATITSV ICFSDGMLPN GDFELGPKPS DMKGTQVINK KAIPSWELSG FVEYIKSGQK QGDMLLVVPA GKFAIRLGNE ASIKQRLNVT
101: KGMYYSLTFS AARTCAQDER LNISVAPDSG VIPIQTVYSS SGWDLYAWAF QAESNVAEIV IHNPGEEEDP ACGPLIDGVA IKALYPPRPT NKNILKNGGF
201: EEGPYVLPNA TTGVLVPPFI EDDHSPLPAW MVESLKAIKY VDVEHFSVPQ GRRAVELVAG KESAIAQVAR TVVGKTYVLS FAVGDANNAC QGSMVVEAFA
301: GKDTLKVPYE SRGKGGFKRA SLRFVAVSTR TRVMFYSTFY SMRSDDFSSL CGPVIDDVKL LSARKP
Arabidopsis Description
Uncharacterized protein At5g11420 [Source:UniProtKB/TrEMBL;Acc:Q9LYE7]
SUBAcon: [golgi,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.