CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 4
extracellular 2
golgi 2
plasma membrane 2
endoplasmic reticulum 2
vacuole 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003186_P001	Maize	extracellular	89.71	89.71
KXG26630	Sorghum	extracellular	76.78	76.58
Os04t0494900-01	Rice	extracellular	75.2	75.6
TraesCS2D01G349700.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	70.18	70.18
HORVU2Hr1G085430.1	Barley	endoplasmic reticulum, golgi	69.39	69.58
TraesCS2B01G369700.1	Wheat	endoplasmic reticulum, golgi	69.13	69.13
TraesCS2A01G351500.1	Wheat	extracellular, golgi	69.13	69.13
OQU81862	Sorghum	cytosol, endoplasmic reticulum, golgi, mitochondrion	65.96	63.78
OQU87155	Sorghum	golgi	63.06	63.73
GSMUA_Achr1P14570_001	Banana	extracellular	61.48	63.32
EES11054	Sorghum	extracellular, vacuole	63.06	63.23
GSMUA_Achr2P08300_001	Banana	extracellular	61.21	62.87
EES11053	Sorghum	endoplasmic reticulum, extracellular, vacuole	59.89	60.21
Bra023324.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	53.03	59.12
VIT_04s0008g05010.t01	Wine grape	extracellular, golgi	56.46	58.15
PGSC0003DMT400074806	Potato	extracellular	56.2	57.41
Solyc03g120040.2.1	Tomato	extracellular, nucleus	39.05	57.36
KXG29757	Sorghum	golgi	56.2	57.26
PGSC0003DMT400073388	Potato	mitochondrion	55.94	57.14
Solyc08g067030.2.1	Tomato	extracellular	55.94	57.14
AT5G11420.1	Thale cress	extracellular, golgi, vacuole	54.62	56.56
Solyc06g067910.2.1	Tomato	nucleus	55.41	56.45
CDY54909	Canola	cytoskeleton, cytosol, peroxisome	50.4	56.34
PGSC0003DMT400014547	Potato	extracellular	54.62	56.25
KXG26629	Sorghum	golgi	61.21	56.04
KRH05109	Soybean	nucleus	54.09	56.01
CDX91217	Canola	extracellular	54.09	56.01
KRH16010	Soybean	nucleus	53.83	55.74
CDX85713	Canola	extracellular	53.83	55.74
AT4G32460.1	Thale cress	endoplasmic reticulum, golgi	53.3	55.34
CDX75247	Canola	golgi	53.3	55.34
Bra011349.1-P	Field mustard	golgi	53.3	55.34
KRH09784	Soybean	nucleus	54.35	55.08
PGSC0003DMT400073682	Potato	cytosol	48.55	54.93
CDX97108	Canola	golgi	53.03	54.92
KRH23537	Soybean	nucleus	54.09	54.81
CDX68849	Canola	golgi	52.77	54.79
CDY19801	Canola	extracellular	52.24	53.51
Bra020500.1-P	Field mustard	extracellular	51.45	53.28
CDY05493	Canola	extracellular	51.45	53.28
Solyc12g042930.1.1	Tomato	endoplasmic reticulum, golgi	53.3	53.16
AT5G25460.1	Thale cress	endoplasmic reticulum, extracellular	51.72	53.12
Bra009841.1-P	Field mustard	extracellular	51.19	52.86
CDX88180	Canola	extracellular	51.19	52.86
CDX80511	Canola	extracellular	51.19	52.86
VIT_09s0002g05930.t01	Wine grape	endoplasmic reticulum, extracellular	56.46	52.84
KRH52489	Soybean	extracellular, golgi	50.92	52.16
KRH52488	Soybean	extracellular	50.13	52.05
KRH44408	Soybean	golgi	52.51	45.54
EER93244	Sorghum	extracellular, vacuole	43.27	42.49
Os03t0328501-00	Rice	plastid	34.04	41.48
EES01494	Sorghum	plasma membrane	42.48	40.45
CDX80516	Canola	plastid	30.61	37.91
Os04t0494800-01	Rice	extracellular	25.33	25.33
Os07t0132600-00	Rice	mitochondrion, nucleus, plastid	23.22	24.11

Protein Annotations

EnsemblPlants:EES11052	EnsemblPlantsGene:SORBI_3006G132900	EntrezGene:8073716	Gene3D:2.60.120.260	InterPro:DUF642	InterPro:Galactose-bd-like_sf
InterPro:IPR008979	PANTHER:PTHR31265	PANTHER:PTHR31265:SF8	PFAM:PF04862	ProteinID:EES11052	ProteinID:EES11052.1
RefSeq:XP_002446724.1	SignalP:SignalP-noTM	SUPFAM:SSF49785	UniParc:UPI0001A86D15	UniProt:C5YBF3	MapMan:35.2

Description

hypothetical protein

Coordinates

chr6:+:49667441..49669798

Molecular Weight (calculated)

40445.3 Da

IEP (calculated)

7.203

GRAVY (calculated)

-0.063

Length

379 amino acids

Sequence
(BLAST)

001: MGRGSETVPN ARRAALFLIV CLAARAASAI QDGLLPNGNF EEAPPKSQLK GSRVMGRNAI PHWEISGFVE YIGSGQKQGD MLLPVPEGAY AVRLGNEASI
101: QQRLALTQGA HYSITFSAAR TCAQAEQLNV TVAPESDILP IQTVYTSSGW DSYSWAFKAT SSVVSLIIHN PGVAEDAACG PLIDLFAIKT LPTPQSSKNN
201: LLKNGDFEEG PYIFPNTRWG VLVPPMDEDD YSPLSPWMIL SSTKSVKYVD APHHVVPHGA RAVELVSGME TALVQNATTV PGLPYRLQFS AGDAGNGCVG
301: SMAVQAYAGG KSVKAQFQSQ GKGGHKRGVL DFTATADQTR VVFVSMGYIM KPDGTLCGPV VDDVSLVCTR NHPARRLLL

Best Arabidopsis Sequence Match ( AT5G11420.1 )
(BLAST)

001: MKGGSLSFLF VLLIATITSV ICFSDGMLPN GDFELGPKPS DMKGTQVINK KAIPSWELSG FVEYIKSGQK QGDMLLVVPA GKFAIRLGNE ASIKQRLNVT
101: KGMYYSLTFS AARTCAQDER LNISVAPDSG VIPIQTVYSS SGWDLYAWAF QAESNVAEIV IHNPGEEEDP ACGPLIDGVA IKALYPPRPT NKNILKNGGF
201: EEGPYVLPNA TTGVLVPPFI EDDHSPLPAW MVESLKAIKY VDVEHFSVPQ GRRAVELVAG KESAIAQVAR TVVGKTYVLS FAVGDANNAC QGSMVVEAFA
301: GKDTLKVPYE SRGKGGFKRA SLRFVAVSTR TRVMFYSTFY SMRSDDFSSL CGPVIDDVKL LSARKP

Arabidopsis Description

Uncharacterized protein At5g11420 [Source:UniProtKB/TrEMBL;Acc:Q9LYE7]
SUBAcon: [extracellular,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.