Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 7
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011349.1-P | Field mustard | golgi | 100.0 | 100.0 |
| CDX68849 | Canola | golgi | 98.63 | 98.63 |
| AT4G32460.1 | Thale cress | endoplasmic reticulum, golgi | 92.33 | 92.33 |
| CDY54909 | Canola | cytoskeleton, cytosol, peroxisome | 74.52 | 80.24 |
| CDX85713 | Canola | extracellular | 79.45 | 79.23 |
| CDX91217 | Canola | extracellular | 79.45 | 79.23 |
| CDX80511 | Canola | extracellular | 77.53 | 77.11 |
| CDX88180 | Canola | extracellular | 77.53 | 77.11 |
| CDX97108 | Canola | golgi | 77.26 | 77.05 |
| CDY05493 | Canola | extracellular | 77.26 | 77.05 |
| CDY19801 | Canola | extracellular | 77.53 | 76.49 |
| VIT_04s0008g05010.t01 | Wine grape | extracellular, golgi | 75.07 | 74.46 |
| KRH16010 | Soybean | nucleus | 72.6 | 72.4 |
| KRH05109 | Soybean | nucleus | 72.33 | 72.13 |
| Solyc08g067030.2.1 | Tomato | extracellular | 69.32 | 68.19 |
| GSMUA_Achr1P14570_001 | Banana | extracellular | 68.49 | 67.93 |
| PGSC0003DMT400074806 | Potato | extracellular | 69.04 | 67.92 |
| GSMUA_Achr2P08300_001 | Banana | extracellular | 68.49 | 67.75 |
| KRH52488 | Soybean | extracellular | 67.67 | 67.67 |
| KRH52489 | Soybean | extracellular, golgi | 67.12 | 66.22 |
| GSMUA_Achr7P08400_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 66.58 | 66.21 |
| GSMUA_Achr2P17020_001 | Banana | endoplasmic reticulum, vacuole | 66.3 | 65.94 |
| TraesCS7A01G453100.1 | Wheat | golgi | 64.93 | 64.05 |
| TraesCS7B01G353600.2 | Wheat | extracellular | 64.93 | 64.05 |
| TraesCS7D01G442500.1 | Wheat | golgi | 64.93 | 64.05 |
| TraesCS6B01G207200.1 | Wheat | extracellular | 65.21 | 63.64 |
| HORVU6Hr1G037000.1 | Barley | extracellular | 64.93 | 63.37 |
| TraesCS6A01G177500.1 | Wheat | extracellular | 64.66 | 63.1 |
| Os01t0611000-01 | Rice | extracellular | 64.11 | 62.73 |
| KXG29757 | Sorghum | golgi | 63.84 | 62.63 |
| Os02t0205200-01 | Rice | mitochondrion, nucleus, plastid | 62.19 | 62.19 |
| TraesCS6D01G166800.1 | Wheat | extracellular, golgi, vacuole | 57.26 | 61.47 |
| OQU87155 | Sorghum | golgi | 62.74 | 61.07 |
| CDX87297 | Canola | endoplasmic reticulum, extracellular | 56.44 | 60.23 |
| CDY39990 | Canola | extracellular | 56.16 | 60.12 |
| CDY54317 | Canola | endoplasmic reticulum | 60.27 | 59.46 |
| CDY57694 | Canola | extracellular | 60.27 | 59.46 |
| Zm00001d044455_P001 | Maize | plasma membrane | 61.64 | 59.06 |
| CDX80516 | Canola | plastid | 49.32 | 58.82 |
| CDX79913 | Canola | cytosol | 33.42 | 57.28 |
| CDY22149 | Canola | extracellular | 55.62 | 55.62 |
| CDY28002 | Canola | extracellular | 55.34 | 55.34 |
| Os04t0494600-01 | Rice | extracellular | 56.99 | 55.17 |
| CDY35979 | Canola | extracellular | 55.07 | 55.07 |
| TraesCS2D01G432500.1 | Wheat | extracellular, golgi | 56.16 | 54.96 |
| CDY48764 | Canola | cytosol | 30.14 | 54.73 |
| TraesCS2B01G455800.1 | Wheat | golgi | 55.89 | 54.69 |
| Os04t0494950-01 | Rice | extracellular, vacuole | 55.62 | 54.57 |
| TraesCS2A01G434700.1 | Wheat | golgi | 55.34 | 54.16 |
| TraesCS2D01G349900.1 | Wheat | extracellular | 53.97 | 53.97 |
| Zm00001d003183_P001 | Maize | extracellular, mitochondrion, plasma membrane, plastid | 56.16 | 53.95 |
| TraesCS2B01G369900.1 | Wheat | extracellular | 53.7 | 53.7 |
| TraesCS2B01G369800.1 | Wheat | extracellular | 55.07 | 53.6 |
| EES11052 | Sorghum | mitochondrion | 55.34 | 53.3 |
| Zm00001d003186_P001 | Maize | extracellular | 55.34 | 53.3 |
| TraesCS2A01G351700.1 | Wheat | extracellular | 53.15 | 53.15 |
| TraesCS2A01G351600.1 | Wheat | endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole | 54.79 | 53.05 |
| Os04t0495000-00 | Rice | extracellular, golgi, vacuole | 53.97 | 52.81 |
| Os02t0527500-00 | Rice | plastid | 18.9 | 52.67 |
| HORVU2Hr1G085440.1 | Barley | extracellular | 54.52 | 52.65 |
| TraesCS2D01G349800.1 | Wheat | mitochondrion | 54.25 | 52.52 |
| TraesCS5B01G390400.1 | Wheat | plastid | 44.11 | 52.44 |
| TraesCS5D01G395400.1 | Wheat | extracellular | 54.25 | 52.38 |
| EES11054 | Sorghum | extracellular, vacuole | 53.97 | 52.12 |
| Zm00001d003184_P001 | Maize | endoplasmic reticulum, extracellular, mitochondrion, peroxisome | 51.23 | 52.09 |
| Os04t0494900-01 | Rice | extracellular | 53.7 | 51.99 |
| TraesCS2B01G369500.1 | Wheat | cytosol | 50.96 | 51.96 |
| EES11053 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 53.42 | 51.72 |
| TraesCS5A01G385400.1 | Wheat | extracellular | 53.42 | 51.72 |
| OQU81862 | Sorghum | cytosol, endoplasmic reticulum, golgi, mitochondrion | 55.34 | 51.53 |
| KXG26630 | Sorghum | extracellular | 53.42 | 51.32 |
| CDY14785 | Canola | extracellular, vacuole | 51.78 | 51.08 |
| TraesCS2B01G369700.1 | Wheat | endoplasmic reticulum, golgi | 52.88 | 50.92 |
| TraesCS2D01G349700.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion | 52.6 | 50.66 |
| CDY06908 | Canola | extracellular | 51.51 | 50.27 |
| HORVU5Hr1G094750.2 | Barley | extracellular | 53.15 | 50.26 |
| TraesCS2A01G351400.1 | Wheat | extracellular | 51.78 | 50.13 |
| HORVU2Hr1G085430.1 | Barley | endoplasmic reticulum, golgi | 51.51 | 49.74 |
| TraesCS2A01G351500.1 | Wheat | extracellular, golgi | 51.51 | 49.6 |
| TraesCS2D01G349500.1 | Wheat | extracellular | 51.23 | 49.6 |
| TraesCS2B01G440300.1 | Wheat | extracellular | 49.86 | 47.4 |
| TraesCS2A01G421300.1 | Wheat | extracellular | 49.59 | 47.01 |
| TraesCS2A01G351200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 47.67 | 45.91 |
| TraesCS2B01G369300.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 47.67 | 45.91 |
| TraesCS2D01G349200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 47.67 | 45.91 |
| CDX84311 | Canola | plasma membrane | 48.49 | 44.25 |
| CDY17255 | Canola | plasma membrane | 48.49 | 44.25 |
| KXG26629 | Sorghum | golgi | 50.14 | 44.2 |
| Zm00001d003187_P002 | Maize | endoplasmic reticulum, plasma membrane | 47.67 | 43.83 |
| Zm00001d025754_P001 | Maize | golgi | 48.77 | 43.63 |
| CDY48765 | Canola | extracellular | 52.05 | 42.89 |
| CDY26302 | Canola | extracellular, golgi, plasma membrane | 47.95 | 42.79 |
| HORVU2Hr1G085370.2 | Barley | endoplasmic reticulum | 43.84 | 42.11 |
| CDX79912 | Canola | extracellular, vacuole | 51.23 | 41.56 |
| CDX99870 | Canola | plasma membrane | 43.29 | 40.51 |
| Zm00001d015715_P001 | Maize | plasma membrane | 61.92 | 38.57 |
| HORVU2Hr1G085340.2 | Barley | mitochondrion, plastid | 51.78 | 37.8 |
| HORVU2Hr1G085520.2 | Barley | extracellular | 34.25 | 34.25 |
| Os03t0328501-00 | Rice | plastid | 26.58 | 31.19 |
| Zm00001d003185_P001 | Maize | extracellular | 56.16 | 29.62 |
| CDX78563 | Canola | extracellular, plasma membrane | 30.96 | 29.35 |
| CDX70545 | Canola | extracellular, vacuole | 29.86 | 28.53 |
| Os04t0494800-01 | Rice | extracellular | 18.63 | 17.94 |
| Os07t0132600-00 | Rice | mitochondrion, nucleus, plastid | 17.81 | 17.81 |
Protein Annotations
| EnsemblPlants:CDX75247 | EnsemblPlantsGene:GSBRNA2T00121107001 | Gene3D:2.60.120.260 | InterPro:DUF642 | InterPro:Galactose-bd-like_sf | InterPro:IPR008979 |
| PANTHER:PTHR31265 | PANTHER:PTHR31265:SF23 | PFAM:PF04862 | ProteinID:CDX75247 | ProteinID:CDX75247.1 | SignalP:SignalP-noTM |
| SUPFAM:SSF49785 | TMHMM:TMhelix | UniParc:UPI0002546433 | MapMan:35.2 | : | : |
Description
BnaA01g04550D
Coordinates
chrLK031804:-:287397..290029
Molecular Weight (calculated)
39814.0 Da
IEP (calculated)
8.655
GRAVY (calculated)
-0.076
Length
365 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKMGVIVFL LLHSIFYTAF CFKDGLLPNG DFELGPHHTD MKGTQVMNKT AIPSWELSGF VEYIPSGHKQ GDMILVVPKG AFAVRLGNEA SIKQKINVKK
101: GSYYSITFSA ARTCAQDERL NVSVAPHHGV MPIQTVYSSS GWDLYSWAFK AQSDYAEVVI HNPGVEEDPA CGPLIDGVAM RALYPPRPTN KNILKNGGFE
201: EGPWVLPNTS SGVLIPPNAV DDHSPLPGWM VESLKAVKYI DSDHFSVPQG RRAVELVAGK ESAVAQVVRT TPGKIYVLSF AVGDASNACA GSMIVEAFAG
301: KDTLKVPHES KGKGGFKRAS LKFVAVSDRT RIMFYSTFYA MRNDDFSSLC GPVIDDVKLL SARRM
101: GSYYSITFSA ARTCAQDERL NVSVAPHHGV MPIQTVYSSS GWDLYSWAFK AQSDYAEVVI HNPGVEEDPA CGPLIDGVAM RALYPPRPTN KNILKNGGFE
201: EGPWVLPNTS SGVLIPPNAV DDHSPLPGWM VESLKAVKYI DSDHFSVPQG RRAVELVAGK ESAVAQVVRT TPGKIYVLSF AVGDASNACA GSMIVEAFAG
301: KDTLKVPHES KGKGGFKRAS LKFVAVSDRT RIMFYSTFYA MRNDDFSSLC GPVIDDVKLL SARRM
001: MKEMGVIVLL LLHSFFYVAF CFNDGLLPNG DFELGPRHSD MKGTQVINIT AIPNWELSGF VEYIPSGHKQ GDMILVVPKG AFAVRLGNEA SIKQKISVKK
101: GSYYSITFSA ARTCAQDERL NVSVAPHHAV MPIQTVYSSS GWDLYSWAFK AQSDYADIVI HNPGVEEDPA CGPLIDGVAM RALFPPRPTN KNILKNGGFE
201: EGPWVLPNIS SGVLIPPNSI DDHSPLPGWM VESLKAVKYI DSDHFSVPQG RRAVELVAGK ESAVAQVVRT IPGKTYVLSF SVGDASNACA GSMIVEAFAG
301: KDTIKVPYES KGKGGFKRSS LRFVAVSSRT RVMFYSTFYA MRNDDFSSLC GPVIDDVKLL SARRP
101: GSYYSITFSA ARTCAQDERL NVSVAPHHAV MPIQTVYSSS GWDLYSWAFK AQSDYADIVI HNPGVEEDPA CGPLIDGVAM RALFPPRPTN KNILKNGGFE
201: EGPWVLPNIS SGVLIPPNSI DDHSPLPGWM VESLKAVKYI DSDHFSVPQG RRAVELVAGK ESAVAQVVRT IPGKTYVLSF SVGDASNACA GSMIVEAFAG
301: KDTIKVPYES KGKGGFKRSS LRFVAVSSRT RVMFYSTFYA MRNDDFSSLC GPVIDDVKLL SARRP
Arabidopsis Description
At4g32460 [Source:UniProtKB/TrEMBL;Acc:Q8LAR0]
SUBAcon: [endoplasmic reticulum,golgi]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.