CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 1
mitochondrion 2
golgi 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003187_P002	Maize	endoplasmic reticulum, plasma membrane	82.61	86.15
Zm00001d025754_P001	Maize	golgi	78.26	79.41
Os04t0494600-01	Rice	extracellular	59.18	64.99
TraesCS5B01G390400.1	Wheat	plastid	46.14	62.22
TraesCS2B01G369500.1	Wheat	cytosol	53.38	61.73
TraesCS5A01G385400.1	Wheat	extracellular	55.8	61.27
EES11052	Sorghum	mitochondrion	56.04	61.21
TraesCS5D01G395400.1	Wheat	extracellular	55.8	61.11
TraesCS2A01G351400.1	Wheat	extracellular	55.56	61.01
TraesCS2D01G349500.1	Wheat	extracellular	55.07	60.48
HORVU5Hr1G094750.2	Barley	extracellular	56.04	60.1
KXG26630	Sorghum	extracellular	53.62	58.42
TraesCS2A01G351200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	53.38	58.31
TraesCS2B01G440300.1	Wheat	extracellular	52.9	57.03
TraesCS2B01G369300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	52.17	56.99
TraesCS2D01G349200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	51.93	56.73
EES11054	Sorghum	extracellular, vacuole	51.45	56.35
TraesCS2A01G421300.1	Wheat	extracellular	52.17	56.1
OQU87155	Sorghum	golgi	50.24	55.47
HORVU2Hr1G085370.2	Barley	endoplasmic reticulum	50.24	54.74
GSMUA_Achr2P08300_001	Banana	extracellular	48.55	54.47
GSMUA_Achr1P14570_001	Banana	extracellular	48.31	54.35
OQU81862	Sorghum	cytosol, endoplasmic reticulum, golgi, mitochondrion	51.45	54.34
EES11053	Sorghum	endoplasmic reticulum, extracellular, vacuole	49.03	53.85
Bra023324.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	43.96	53.53
KXG29757	Sorghum	golgi	47.58	52.96
CDY54909	Canola	cytoskeleton, cytosol, peroxisome	43.0	52.51
VIT_04s0008g05010.t01	Wine grape	extracellular, golgi	46.38	52.17
PGSC0003DMT400074806	Potato	extracellular	46.62	52.02
AT4G32460.1	Thale cress	endoplasmic reticulum, golgi	45.65	51.78
Solyc08g067030.2.1	Tomato	extracellular	46.38	51.75
Solyc03g120040.2.1	Tomato	extracellular, nucleus	32.13	51.55
PGSC0003DMT400073388	Potato	mitochondrion	46.14	51.48
AT5G11420.1	Thale cress	extracellular, golgi, vacuole	45.41	51.37
KRH05109	Soybean	nucleus	45.17	51.09
PGSC0003DMT400014547	Potato	extracellular	45.41	51.09
Solyc06g067910.2.1	Tomato	nucleus	45.89	51.08
CDX85713	Canola	extracellular	44.93	50.82
CDX91217	Canola	extracellular	44.93	50.82
KRH16010	Soybean	nucleus	44.93	50.82
CDX97108	Canola	golgi	44.69	50.55
Bra020500.1-P	Field mustard	extracellular	44.69	50.55
CDY05493	Canola	extracellular	44.69	50.55
KRH09784	Soybean	nucleus	45.41	50.27
Bra011349.1-P	Field mustard	golgi	44.2	50.14
CDX68849	Canola	golgi	44.2	50.14
CDX75247	Canola	golgi	44.2	50.14
KRH23537	Soybean	nucleus	45.17	50.0
AT5G25460.1	Thale cress	endoplasmic reticulum, extracellular	44.2	49.59
Bra009841.1-P	Field mustard	extracellular	43.96	49.59
CDX88180	Canola	extracellular	43.96	49.59
CDX80511	Canola	extracellular	43.96	49.59
PGSC0003DMT400073682	Potato	cytosol	40.1	49.55
Solyc12g042930.1.1	Tomato	endoplasmic reticulum, golgi	44.69	48.68
CDY19801	Canola	extracellular	43.48	48.65
VIT_09s0002g05930.t01	Wine grape	endoplasmic reticulum, extracellular	47.58	48.64
KRH52488	Soybean	extracellular	42.75	48.49
KRH52489	Soybean	extracellular, golgi	42.75	47.84
HORVU2Hr1G085340.2	Barley	mitochondrion, plastid	56.28	46.6
KRH44408	Soybean	golgi	44.93	42.56
EER93244	Sorghum	extracellular, vacuole	38.65	41.45
EES01494	Sorghum	plasma membrane	35.99	37.44
CDX80516	Canola	plastid	27.54	37.25

Protein Annotations

EnsemblPlants:KXG26629	EnsemblPlantsGene:SORBI_3006G132800	Gene3D:2.60.120.260	InterPro:DUF642	InterPro:Galactose-bd-like_sf	InterPro:IPR008979
PANTHER:PTHR31265	PANTHER:PTHR31265:SF11	PFAM:PF04862	ProteinID:KXG26629	ProteinID:KXG26629.1	SEG:seg
SUPFAM:SSF49785	TMHMM:TMhelix	UniParc:UPI00081ADFBC	UniProt:A0A1B6PLT9	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr6:+:49660853..49665093

Molecular Weight (calculated)

43701.6 Da

IEP (calculated)

4.793

GRAVY (calculated)

-0.045

Length

414 amino acids

Sequence
(BLAST)

001: MLYVRGYEGR GYPEMAIGKR SVHGAALVLL LVVCVAARAV SAVGDGPLLN GNFEDSPNPS QMSGSVVTGE HAISYWRTSG HIEFICSGQT QGDMVLTVPD
101: GAHALRLGNG ASIEQRISLT PGSYYSLTFS ASRTCAQDEV LNVTAAPVSG SGAAAQTGEL PIQTVYTSSG WDSYSWAFKA EAGLVSIIIT HICGEQEDPA
201: CGPVVDAFAI KTLSQPEATG DNLLRNGDFE EGPYIPPESP CGVMLPPMDQ DCVSPLPGWK IMSYKKSVKY VDSAHFAVPR GARAVELVSG VETALMQEVY
301: TTVEGSWYRL EFSVGDAANG CASPSYDDGS SSGGMKVKAY AGSSETTVDI DFHGAGGSKR GKIEFRATAN PTRVVFVSLG YHTKCDNSGT LCGPVVDDVS
401: LVPIPQPYAR RLLL

Best Arabidopsis Sequence Match ( AT1G80240.1 )
(BLAST)

001: MMYQEAALLL ALLFISSNVV LSAPVRDGLL PNGNFELGPK PSQMKGSVVK ERTAVPNWNI IGFVEFIKSG QKQDDMVLVV PQGSSAVRLG NEASISQKIS
101: VLPGRLYSIT FSAARTCAQD ERLNISVTHE SGVIPIQTMY GSDGWDSYSW AFKAGGPEIE IRFHNPGVEE HPACGPLIDA VAIKALFPPR FSGYNLIKNG
201: NFEEGPYVFP TAKWGVLIPP FIEDDNSPLP GWMIESLKAV KYVDKAHFAV PEGHRAIELV GGKESAISQI VRTSLNKFYA LTFNVGDARD GCEGPMIVEA
301: FAGQGKVMVD YASKGKGGFR RGRLVFKAVS ARTRVTFLST FYHMKSDHSG SLCGPVIDDV RLVAVGKLRG

Arabidopsis Description

At1g80240 [Source:UniProtKB/TrEMBL;Acc:Q9SSB7]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.