Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- golgi 4
- plasma membrane 4
- endoplasmic reticulum 5
- vacuole 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G351200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 97.63 | 97.63 |
| TraesCS2B01G369300.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 96.83 | 96.83 |
| HORVU2Hr1G085370.2 | Barley | endoplasmic reticulum | 82.06 | 81.84 |
| TraesCS5D01G395400.1 | Wheat | extracellular | 65.44 | 65.61 |
| TraesCS2D01G349500.1 | Wheat | extracellular | 63.32 | 63.66 |
| Os04t0494600-01 | Rice | extracellular | 60.69 | 61.01 |
| TraesCS2D01G349700.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion | 58.84 | 58.84 |
| GSMUA_Achr1P14570_001 | Banana | extracellular | 53.83 | 55.43 |
| TraesCS2D01G349800.1 | Wheat | mitochondrion | 54.88 | 55.17 |
| TraesCS7D01G442500.1 | Wheat | golgi | 53.3 | 54.59 |
| TraesCS2D01G432500.1 | Wheat | extracellular, golgi | 53.56 | 54.42 |
| GSMUA_Achr2P08300_001 | Banana | extracellular | 51.98 | 53.39 |
| TraesCS2D01G349900.1 | Wheat | extracellular | 50.92 | 52.88 |
| Bra023324.1-P | Field mustard | cytoskeleton, cytosol, peroxisome | 47.23 | 52.65 |
| Zm00001d003187_P002 | Maize | endoplasmic reticulum, plasma membrane | 54.88 | 52.39 |
| KXG26629 | Sorghum | golgi | 56.73 | 51.93 |
| Zm00001d025754_P001 | Maize | golgi | 55.15 | 51.23 |
| PGSC0003DMT400074806 | Potato | extracellular | 50.13 | 51.21 |
| Solyc08g067030.2.1 | Tomato | extracellular | 49.87 | 50.94 |
| PGSC0003DMT400073388 | Potato | mitochondrion | 49.34 | 50.4 |
| CDX85713 | Canola | extracellular | 48.55 | 50.27 |
| CDX91217 | Canola | extracellular | 48.28 | 50.0 |
| Solyc06g067910.2.1 | Tomato | nucleus | 49.08 | 50.0 |
| Solyc03g120040.2.1 | Tomato | extracellular, nucleus | 34.04 | 50.0 |
| VIT_04s0008g05010.t01 | Wine grape | extracellular, golgi | 48.55 | 50.0 |
| CDY54909 | Canola | cytoskeleton, cytosol, peroxisome | 44.59 | 49.85 |
| AT5G11420.1 | Thale cress | extracellular, golgi, vacuole | 48.02 | 49.73 |
| KRH09784 | Soybean | nucleus | 48.81 | 49.47 |
| PGSC0003DMT400014547 | Potato | extracellular | 47.76 | 49.18 |
| CDX97108 | Canola | golgi | 47.49 | 49.18 |
| KRH23537 | Soybean | nucleus | 48.28 | 48.93 |
| TraesCS6D01G166800.1 | Wheat | extracellular, golgi, vacuole | 43.54 | 48.53 |
| AT4G32460.1 | Thale cress | endoplasmic reticulum, golgi | 46.7 | 48.49 |
| PGSC0003DMT400073682 | Potato | cytosol | 42.74 | 48.36 |
| AT5G25460.1 | Thale cress | endoplasmic reticulum, extracellular | 46.97 | 48.24 |
| CDX88180 | Canola | extracellular | 46.7 | 48.23 |
| Bra009841.1-P | Field mustard | extracellular | 46.7 | 48.23 |
| CDX80511 | Canola | extracellular | 46.7 | 48.23 |
| KRH05109 | Soybean | nucleus | 46.17 | 47.81 |
| KRH16010 | Soybean | nucleus | 46.17 | 47.81 |
| CDX75247 | Canola | golgi | 45.91 | 47.67 |
| Bra011349.1-P | Field mustard | golgi | 45.91 | 47.67 |
| CDY19801 | Canola | extracellular | 46.44 | 47.57 |
| VIT_09s0002g05930.t01 | Wine grape | endoplasmic reticulum, extracellular | 50.66 | 47.41 |
| CDY05493 | Canola | extracellular | 45.65 | 47.27 |
| Bra020500.1-P | Field mustard | extracellular | 45.65 | 47.27 |
| CDX68849 | Canola | golgi | 45.38 | 47.12 |
| Solyc12g042930.1.1 | Tomato | endoplasmic reticulum, golgi | 46.97 | 46.84 |
| KRH52488 | Soybean | extracellular | 44.06 | 45.75 |
| KRH52489 | Soybean | extracellular, golgi | 44.59 | 45.68 |
| KRH44408 | Soybean | golgi | 46.44 | 40.27 |
| TraesCS3D01G294100.1 | Wheat | plasma membrane | 40.11 | 38.58 |
| TraesCS5D01G469800.1 | Wheat | extracellular, vacuole | 39.05 | 37.28 |
| CDX80516 | Canola | plastid | 27.97 | 34.64 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G349200.1 | EnsemblPlantsGene:TraesCS2D01G349200 | Gene3D:2.60.120.260 | InterPro:DUF642 | InterPro:Galactose-bd-like_sf | InterPro:IPR008979 |
| PANTHER:PTHR31265 | PANTHER:PTHR31265:SF11 | PFAM:PF04862 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF49785 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2D:-:446857758..446859427
Molecular Weight (calculated)
40142.0 Da
IEP (calculated)
5.049
GRAVY (calculated)
-0.181
Length
379 amino acids
Sequence
(BLAST)
(BLAST)
001: MVIKGALLFL VVCAAARAAS AGDGPLPNGN FEDSPDRFQM DGSRVTGANA IPQWKITGHV EYIESGQKEG DMILTVPEGS HAVRLGEDGS IHQQLSVAPG
101: TQYSVTFSAA RTCAQYEKLT VSVVPGDASD EISIQTVYTS SGWDSYCWAF QATNDVMTLT IHNPVHEDDP ACGPMIDSVA IKALYPPQAA GDNLLRNGDF
201: EQGPYIAPGS PFGVLVPNRD ETHISPISGW MIMSYSKVIK YVDSQHYAVP HGSYAVELVS GGEAALVQEV DTAPGSACRL EFSVGNAGNR CESSDEQPMR
301: VLVSTAGGSK TVVHRSDGNG GGTTRASLEF TAIHSRTKVV FSGSSYHTKS DSSGTRCGPV VDDASLVCVP PTPARRLLR
101: TQYSVTFSAA RTCAQYEKLT VSVVPGDASD EISIQTVYTS SGWDSYCWAF QATNDVMTLT IHNPVHEDDP ACGPMIDSVA IKALYPPQAA GDNLLRNGDF
201: EQGPYIAPGS PFGVLVPNRD ETHISPISGW MIMSYSKVIK YVDSQHYAVP HGSYAVELVS GGEAALVQEV DTAPGSACRL EFSVGNAGNR CESSDEQPMR
301: VLVSTAGGSK TVVHRSDGNG GGTTRASLEF TAIHSRTKVV FSGSSYHTKS DSSGTRCGPV VDDASLVCVP PTPARRLLR
001: MMYQEAALLL ALLFISSNVV LSAPVRDGLL PNGNFELGPK PSQMKGSVVK ERTAVPNWNI IGFVEFIKSG QKQDDMVLVV PQGSSAVRLG NEASISQKIS
101: VLPGRLYSIT FSAARTCAQD ERLNISVTHE SGVIPIQTMY GSDGWDSYSW AFKAGGPEIE IRFHNPGVEE HPACGPLIDA VAIKALFPPR FSGYNLIKNG
201: NFEEGPYVFP TAKWGVLIPP FIEDDNSPLP GWMIESLKAV KYVDKAHFAV PEGHRAIELV GGKESAISQI VRTSLNKFYA LTFNVGDARD GCEGPMIVEA
301: FAGQGKVMVD YASKGKGGFR RGRLVFKAVS ARTRVTFLST FYHMKSDHSG SLCGPVIDDV RLVAVGKLRG
101: VLPGRLYSIT FSAARTCAQD ERLNISVTHE SGVIPIQTMY GSDGWDSYSW AFKAGGPEIE IRFHNPGVEE HPACGPLIDA VAIKALFPPR FSGYNLIKNG
201: NFEEGPYVFP TAKWGVLIPP FIEDDNSPLP GWMIESLKAV KYVDKAHFAV PEGHRAIELV GGKESAISQI VRTSLNKFYA LTFNVGDARD GCEGPMIVEA
301: FAGQGKVMVD YASKGKGGFR RGRLVFKAVS ARTRVTFLST FYHMKSDHSG SLCGPVIDDV RLVAVGKLRG
Arabidopsis Description
At1g80240 [Source:UniProtKB/TrEMBL;Acc:Q9SSB7]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.