CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra009841.1-P	Field mustard	extracellular	100.0	100.0
CDX88180	Canola	extracellular	100.0	100.0
CDY54909	Canola	cytoskeleton, cytosol, peroxisome	89.37	96.76
CDY05493	Canola	extracellular	96.19	96.45
CDY19801	Canola	extracellular	96.73	95.95
AT5G25460.1	Thale cress	endoplasmic reticulum, extracellular	92.1	91.6
CDX91217	Canola	extracellular	88.28	88.52
CDX85713	Canola	extracellular	87.74	87.98
CDX97108	Canola	golgi	83.92	84.15
CDX75247	Canola	golgi	77.11	77.53
CDX68849	Canola	golgi	76.57	76.99
VIT_04s0008g05010.t01	Wine grape	extracellular, golgi	76.84	76.63
KRH05109	Soybean	nucleus	72.75	72.95
KRH16010	Soybean	nucleus	72.75	72.95
CDX80516	Canola	plastid	58.58	70.26
Solyc08g067030.2.1	Tomato	extracellular	70.03	69.27
PGSC0003DMT400074806	Potato	extracellular	69.75	69.0
GSMUA_Achr1P14570_001	Banana	extracellular	68.39	68.21
GSMUA_Achr2P08300_001	Banana	extracellular	67.57	67.21
KRH52488	Soybean	extracellular	66.48	66.85
GSMUA_Achr7P08400_001	Banana	endoplasmic reticulum, extracellular, vacuole	66.48	66.48
GSMUA_Achr2P17020_001	Banana	endoplasmic reticulum, vacuole	66.21	66.21
KRH52489	Soybean	extracellular, golgi	65.4	64.86
Os01t0611000-01	Rice	extracellular	64.31	63.27
TraesCS7D01G442500.1	Wheat	golgi	63.49	62.97
TraesCS7B01G353600.2	Wheat	extracellular	63.22	62.7
CDX87297	Canola	endoplasmic reticulum, extracellular	58.04	62.28
TraesCS7A01G453100.1	Wheat	golgi	62.67	62.16
CDY39990	Canola	extracellular	57.49	61.88
KXG29757	Sorghum	golgi	62.13	61.29
HORVU6Hr1G037000.1	Barley	extracellular	62.4	61.23
TraesCS6B01G207200.1	Wheat	extracellular	62.4	61.23
OQU87155	Sorghum	golgi	62.4	61.07
TraesCS6A01G177500.1	Wheat	extracellular	62.13	60.96
Os02t0205200-01	Rice	mitochondrion, nucleus, plastid	59.95	60.27
CDY54317	Canola	endoplasmic reticulum	60.76	60.27
CDY57694	Canola	extracellular	60.76	60.27
Zm00001d044455_P001	Maize	plasma membrane	61.85	59.58
TraesCS6D01G166800.1	Wheat	extracellular, golgi, vacuole	53.95	58.24
Os04t0494950-01	Rice	extracellular, vacuole	56.13	55.38
CDY28002	Canola	extracellular	55.04	55.34
CDY22149	Canola	extracellular	54.77	55.07
CDY35979	Canola	extracellular	54.77	55.07
Os04t0494600-01	Rice	extracellular	56.4	54.91
TraesCS2B01G455800.1	Wheat	golgi	55.59	54.69
TraesCS2B01G369800.1	Wheat	extracellular	55.59	54.4
TraesCS2D01G432500.1	Wheat	extracellular, golgi	55.04	54.16
CDX79913	Canola	cytosol	31.34	53.99
Zm00001d003183_P001	Maize	extracellular, mitochondrion, plasma membrane, plastid	55.86	53.95
CDY48764	Canola	cytosol	29.43	53.73
HORVU2Hr1G085440.1	Barley	extracellular	55.31	53.7
TraesCS2D01G349800.1	Wheat	mitochondrion	55.04	53.58
Os02t0527500-00	Rice	plastid	19.07	53.44
TraesCS2A01G434700.1	Wheat	golgi	54.22	53.35
TraesCS2A01G351600.1	Wheat	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	54.77	53.32
OQU81862	Sorghum	cytosol, endoplasmic reticulum, golgi, mitochondrion	56.68	53.06
Os04t0495000-00	Rice	extracellular, golgi, vacuole	53.41	52.55
TraesCS2B01G369500.1	Wheat	cytosol	51.23	52.51
TraesCS5B01G390400.1	Wheat	plastid	43.87	52.44
Os04t0494900-01	Rice	extracellular	53.68	52.25
Zm00001d003184_P001	Maize	endoplasmic reticulum, extracellular, mitochondrion, peroxisome	50.95	52.09
TraesCS5A01G385400.1	Wheat	extracellular	53.41	51.99
Zm00001d003186_P001	Maize	extracellular	53.68	51.98
TraesCS5D01G395400.1	Wheat	extracellular	53.41	51.85
EES11053	Sorghum	endoplasmic reticulum, extracellular, vacuole	53.13	51.72
TraesCS2D01G349900.1	Wheat	extracellular	51.23	51.51
TraesCS2A01G351400.1	Wheat	extracellular	52.86	51.46
EES11052	Sorghum	mitochondrion	52.86	51.19
EES11054	Sorghum	extracellular, vacuole	52.59	51.06
TraesCS2B01G369900.1	Wheat	extracellular	50.68	50.96
TraesCS2A01G351700.1	Wheat	extracellular	50.41	50.68
TraesCS2D01G349500.1	Wheat	extracellular	51.77	50.4
TraesCS2B01G369700.1	Wheat	endoplasmic reticulum, golgi	52.04	50.4
TraesCS2D01G349700.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	52.04	50.4
HORVU2Hr1G085430.1	Barley	endoplasmic reticulum, golgi	51.77	50.26
TraesCS2B01G440300.1	Wheat	extracellular	52.59	50.26
HORVU5Hr1G094750.2	Barley	extracellular	52.59	50.0
KXG26630	Sorghum	extracellular	51.5	49.74
TraesCS2A01G421300.1	Wheat	extracellular	51.77	49.35
TraesCS2A01G351500.1	Wheat	extracellular, golgi	50.68	49.08
CDY14785	Canola	extracellular, vacuole	49.32	48.92
CDY06908	Canola	extracellular	49.05	48.13
TraesCS2B01G369300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	48.5	46.97
TraesCS2A01G351200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	48.23	46.7
TraesCS2D01G349200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	48.23	46.7
Zm00001d003187_P002	Maize	endoplasmic reticulum, plasma membrane	47.96	44.33
KXG26629	Sorghum	golgi	49.59	43.96
Zm00001d025754_P001	Maize	golgi	48.77	43.87
HORVU2Hr1G085370.2	Barley	endoplasmic reticulum	44.96	43.42
CDY48765	Canola	extracellular	50.95	42.21
CDX84311	Canola	plasma membrane	44.96	41.25
CDY17255	Canola	plasma membrane	44.96	41.25
CDX79912	Canola	extracellular, vacuole	50.14	40.89
CDY26302	Canola	extracellular, golgi, plasma membrane	45.23	40.59
HORVU2Hr1G085340.2	Barley	mitochondrion, plastid	52.86	38.8
Zm00001d015715_P001	Maize	plasma membrane	61.85	38.74
CDX99870	Canola	plasma membrane	41.14	38.72
HORVU2Hr1G085520.2	Barley	extracellular	32.15	32.33
CDX78563	Canola	extracellular, plasma membrane	32.43	30.91
CDX70545	Canola	extracellular, vacuole	31.06	29.84
Os03t0328501-00	Rice	plastid	24.8	29.26
Zm00001d003185_P001	Maize	extracellular	55.04	29.19
Os04t0494800-01	Rice	extracellular	19.07	18.47
Os07t0132600-00	Rice	mitochondrion, nucleus, plastid	16.35	16.44

Protein Annotations

EnsemblPlants:CDX80511	EnsemblPlantsGene:GSBRNA2T00133615001	Gene3D:2.60.120.260	InterPro:DUF642	InterPro:Galactose-bd-like_sf	InterPro:IPR008979
PANTHER:PTHR31265	PANTHER:PTHR31265:SF23	PFAM:PF04862	ProteinID:CDX80511	ProteinID:CDX80511.1	SEG:seg
SignalP:SignalP-noTM	SUPFAM:SSF49785	TMHMM:TMhelix	UniParc:UPI000253F343	MapMan:35.2	:

Description

BnaC07g29330D

Coordinates

chrLK031821:+:1023773..1026122

Molecular Weight (calculated)

39673.9 Da

IEP (calculated)

6.928

GRAVY (calculated)

0.036

Length

367 amino acids

Sequence
(BLAST)

001: MGGVTVVSLV LLLIATANSA VVPFRDGILP NGDFELGPKP SDMKGTEVIN KMAIPNWEVT GFVEYISSGH KQGDMLLVVP AGKFAVRLGN EASIKQRLKV
101: VKGMYYSLTF SAARTCAQDE RLNISVAPDS GVIPVQTVYS SSGWDLYAWA FQAESEVAEI VIHNPGEEED PACGPLIDGV AMRALYPPRP TNKNILKNGG
201: FEEGPLVLPG STTGVLIPPF IEDDHSPLPG WMVESLKAVK YVDTEHFSIP QGRRAIELVA GKESAIAQVA RTIIGKTYVL SFAVGDANNA CKGSMVVEAF
301: AGRDTLKVPY ESRGTGGFKR ASIRFVAVST RTRVMFYSTF YAMRSDDFSS LCGPVIDDVK LLSVRKR

Best Arabidopsis Sequence Match ( AT5G25460.1 )
(BLAST)

001: MEGVTVVSFF LLFIATAMAA KSTVSFRDGM LPNGDFELGP KPSDMKGTEI LNKLAIPNWE VTGFVEYIKS GHKQGDMLLV VPAGKFAVRL GNEASIKQRL
101: KVVKGMYYSL TFSAARTCAQ DERLNISVAP DSGVIPIQTV YSSSGWDLYA WAFQAESDVA EVVIHNPGVE EDPACGPLID GVAMRSLYPP RPTNKNILKN
201: GGFEEGPLVL PGSTTGVLIP PFIEDDHSPL PGWMVESLKA VKYVDVEHFS VPQGRRAIEL VAGKESAIAQ VVRTVIGKTY VLSFAVGDAN NACKGSMVVE
301: AFAGKDTLKV PYESKGTGGF KRASIRFVAV STRSRIMFYS TFYAMRSDDF SSLCGPVIDD VKLISVRKP

Arabidopsis Description

At5g25460 [Source:UniProtKB/TrEMBL;Acc:Q94F20]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.