Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27341663
|
msms PMID:
27341663
doi
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG29757 | Sorghum | golgi | 59.39 | 93.55 |
| HORVU6Hr1G037000.1 | Barley | extracellular | 53.24 | 83.42 |
| TraesCS6A01G177500.1 | Wheat | extracellular | 53.07 | 83.16 |
| TraesCS6B01G207200.1 | Wheat | extracellular | 53.07 | 83.16 |
| TraesCS6D01G166800.1 | Wheat | extracellular, golgi, vacuole | 47.61 | 82.06 |
| Os02t0205200-01 | Rice | mitochondrion, nucleus, plastid | 51.02 | 81.92 |
| GSMUA_Achr7P08400_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 45.56 | 72.75 |
| Os02t0527500-00 | Rice | plastid | 15.87 | 70.99 |
| GSMUA_Achr2P17020_001 | Banana | endoplasmic reticulum, vacuole | 43.69 | 69.75 |
| VIT_04s0008g05010.t01 | Wine grape | extracellular, golgi | 41.64 | 66.3 |
| Bra023324.1-P | Field mustard | cytoskeleton, cytosol, peroxisome | 37.88 | 65.29 |
| CDY54909 | Canola | cytoskeleton, cytosol, peroxisome | 36.86 | 63.72 |
| CDX97108 | Canola | golgi | 39.42 | 63.11 |
| AT5G11420.1 | Thale cress | extracellular, golgi, vacuole | 39.42 | 63.11 |
| CDX91217 | Canola | extracellular | 38.91 | 62.3 |
| CDX68849 | Canola | golgi | 38.74 | 62.19 |
| CDX85713 | Canola | extracellular | 38.74 | 62.02 |
| PGSC0003DMT400074806 | Potato | extracellular | 39.25 | 61.99 |
| CDX75247 | Canola | golgi | 38.57 | 61.92 |
| AT4G32460.1 | Thale cress | endoplasmic reticulum, golgi | 38.57 | 61.92 |
| Bra011349.1-P | Field mustard | golgi | 38.57 | 61.92 |
| CDX88180 | Canola | extracellular | 38.74 | 61.85 |
| CDX80511 | Canola | extracellular | 38.74 | 61.85 |
| Bra009841.1-P | Field mustard | extracellular | 38.74 | 61.85 |
| CDY05493 | Canola | extracellular | 38.57 | 61.75 |
| Bra020500.1-P | Field mustard | extracellular | 38.57 | 61.75 |
| Solyc08g067030.2.1 | Tomato | extracellular | 39.08 | 61.73 |
| KRH16010 | Soybean | nucleus | 38.4 | 61.48 |
| CDY19801 | Canola | extracellular | 38.74 | 61.35 |
| AT5G25460.1 | Thale cress | endoplasmic reticulum, extracellular | 38.4 | 60.98 |
| KRH05109 | Soybean | nucleus | 38.05 | 60.93 |
| KRH52488 | Soybean | extracellular | 37.37 | 60.0 |
| KRH52489 | Soybean | extracellular, golgi | 37.54 | 59.46 |
| Solyc06g067910.2.1 | Tomato | nucleus | 37.54 | 59.14 |
| Zm00001d044455_P001 | Maize | plasma membrane | 38.4 | 59.06 |
| PGSC0003DMT400073388 | Potato | mitochondrion | 37.2 | 58.76 |
| KRH23537 | Soybean | nucleus | 37.37 | 58.56 |
| KRH09784 | Soybean | nucleus | 37.37 | 58.56 |
| Solyc03g120040.2.1 | Tomato | extracellular, nucleus | 25.6 | 58.14 |
| PGSC0003DMT400014547 | Potato | extracellular | 36.01 | 57.34 |
| VIT_09s0002g05930.t01 | Wine grape | endoplasmic reticulum, extracellular | 39.59 | 57.28 |
| Zm00001d003186_P001 | Maize | extracellular | 36.35 | 56.2 |
| PGSC0003DMT400073682 | Potato | cytosol | 32.08 | 56.12 |
| Solyc12g042930.1.1 | Tomato | endoplasmic reticulum, golgi | 35.84 | 55.26 |
| Zm00001d003183_P001 | Maize | extracellular, mitochondrion, plasma membrane, plastid | 34.81 | 53.68 |
| Zm00001d003184_P001 | Maize | endoplasmic reticulum, extracellular, mitochondrion, peroxisome | 32.25 | 52.65 |
| KRH44408 | Soybean | golgi | 36.69 | 49.2 |
| CDX80516 | Canola | plastid | 25.26 | 48.37 |
| Zm00001d003187_P002 | Maize | endoplasmic reticulum, plasma membrane | 31.74 | 46.85 |
| Zm00001d025754_P001 | Maize | golgi | 31.74 | 45.59 |
| Zm00001d034547_P002 | Maize | extracellular, vacuole | 29.86 | 42.27 |
| Zm00001d043414_P001 | Maize | plasma membrane | 28.5 | 42.07 |
| Zm00001d012718_P004 | Maize | endoplasmic reticulum, plasma membrane | 27.13 | 37.95 |
| Zm00001d003185_P001 | Maize | extracellular | 35.32 | 29.91 |
Protein Annotations
| EnsemblPlants:Zm00001d015715_P001 | EnsemblPlants:Zm00001d015715_T001 | EnsemblPlantsGene:Zm00001d015715 | Gene3D:2.60.120.260 | InterPro:DUF642 | InterPro:Galactose-bd-like_sf |
| InterPro:IPR008979 | PANTHER:PTHR31265 | PANTHER:PTHR31265:SF3 | PFAM:PF04862 | ProteinID:AQK69347.1 | SEG:seg |
| SignalP:SignalP-noTM | UniParc:UPI0008423CF5 | UniProt:A0A1D6H3D4 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr5:+:111122849..111143518
Molecular Weight (calculated)
63863.2 Da
IEP (calculated)
7.426
GRAVY (calculated)
-0.155
Length
586 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRLALAVPV MLLLLCTTCR LTLGITDGLL PNGNFERSPL PSQLRGTRVV GASAIPSWQT SGFVEYISSG QKQGDMVLVV PEGAYAVRLG NEASIRQRLR
101: GAARGARYSL TFSAARTCAQ AEQLNVSASG QSGLLAMQTM YSSNGWDSYA WAWVANADEV DIVIHNPGVT EDPACGPLID SVAIKTLNPP RRTNKNLVKN
201: GDFEEGPYII PGTKWGVLIP SRVVEDHSPL PGWMVESLKA IKYIDGESFA VPRGRRAVEL LAGRESAIAQ VIRTVPGRQY VLSFTIGDAS NACRGSLMVE
301: AYAGRESTKV AYESAGKGGV KRAVLPFRAA SARTRLVFFS SFYSTRSDDL SSLCGPVLDD VVVVSGNFIA QMNPACHYFT VLLLYSRNYL ERKKPSEAKF
401: FNKPLENYHY MAIIFGNQQG TGLFAKCTSD PLGFDTSESA GTYGVDYSGD LAGHESNNAS PTHDSGESLN PSGPIRDGGD SSTRSGARRN RGCMMMEDED
501: PLICTVTEAF KTLSDAIKQS APQPRLIIPP NLWTMMKQIP VFERKHIAHY YGYLCENPAL AYAFLEMGLD DQMVWVSMYI KTHLSD
101: GAARGARYSL TFSAARTCAQ AEQLNVSASG QSGLLAMQTM YSSNGWDSYA WAWVANADEV DIVIHNPGVT EDPACGPLID SVAIKTLNPP RRTNKNLVKN
201: GDFEEGPYII PGTKWGVLIP SRVVEDHSPL PGWMVESLKA IKYIDGESFA VPRGRRAVEL LAGRESAIAQ VIRTVPGRQY VLSFTIGDAS NACRGSLMVE
301: AYAGRESTKV AYESAGKGGV KRAVLPFRAA SARTRLVFFS SFYSTRSDDL SSLCGPVLDD VVVVSGNFIA QMNPACHYFT VLLLYSRNYL ERKKPSEAKF
401: FNKPLENYHY MAIIFGNQQG TGLFAKCTSD PLGFDTSESA GTYGVDYSGD LAGHESNNAS PTHDSGESLN PSGPIRDGGD SSTRSGARRN RGCMMMEDED
501: PLICTVTEAF KTLSDAIKQS APQPRLIIPP NLWTMMKQIP VFERKHIAHY YGYLCENPAL AYAFLEMGLD DQMVWVSMYI KTHLSD
001: MKGGSLSFLF VLLIATITSV ICFSDGMLPN GDFELGPKPS DMKGTQVINK KAIPSWELSG FVEYIKSGQK QGDMLLVVPA GKFAIRLGNE ASIKQRLNVT
101: KGMYYSLTFS AARTCAQDER LNISVAPDSG VIPIQTVYSS SGWDLYAWAF QAESNVAEIV IHNPGEEEDP ACGPLIDGVA IKALYPPRPT NKNILKNGGF
201: EEGPYVLPNA TTGVLVPPFI EDDHSPLPAW MVESLKAIKY VDVEHFSVPQ GRRAVELVAG KESAIAQVAR TVVGKTYVLS FAVGDANNAC QGSMVVEAFA
301: GKDTLKVPYE SRGKGGFKRA SLRFVAVSTR TRVMFYSTFY SMRSDDFSSL CGPVIDDVKL LSARKP
101: KGMYYSLTFS AARTCAQDER LNISVAPDSG VIPIQTVYSS SGWDLYAWAF QAESNVAEIV IHNPGEEEDP ACGPLIDGVA IKALYPPRPT NKNILKNGGF
201: EEGPYVLPNA TTGVLVPPFI EDDHSPLPAW MVESLKAIKY VDVEHFSVPQ GRRAVELVAG KESAIAQVAR TVVGKTYVLS FAVGDANNAC QGSMVVEAFA
301: GKDTLKVPYE SRGKGGFKRA SLRFVAVSTR TRVMFYSTFY SMRSDDFSSL CGPVIDDVKL LSARKP
Arabidopsis Description
Uncharacterized protein At5g11420 [Source:UniProtKB/TrEMBL;Acc:Q9LYE7]
SUBAcon: [golgi,extracellular,vacuole]
SUBAcon: [golgi,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.