Factsheet for Zm00001d003184_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, extracellular, peroxisome

Predictor Summary:

plastid 1
endoplasmic reticulum 1
mitochondrion 2
extracellular 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003183_P001	Maize	extracellular, mitochondrion, plasma membrane, plastid	87.74	82.89
OQU81862	Sorghum	cytosol, endoplasmic reticulum, golgi, mitochondrion	84.4	77.3
TraesCS2A01G351600.1	Wheat	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	66.3	63.13
Os04t0494950-01	Rice	extracellular, vacuole	63.79	61.56
TraesCS2B01G369800.1	Wheat	extracellular	64.07	61.33
TraesCS2D01G349800.1	Wheat	mitochondrion	64.35	61.27
HORVU2Hr1G085440.1	Barley	extracellular	64.35	61.11
Zm00001d044455_P001	Maize	plasma membrane	61.28	57.74
Zm00001d003186_P001	Maize	extracellular	59.61	56.46
GSMUA_Achr1P14570_001	Banana	extracellular	56.27	54.89
PGSC0003DMT400073682	Potato	cytosol	50.42	54.03
GSMUA_Achr2P08300_001	Banana	extracellular	55.43	53.93
Bra023324.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	50.7	53.53
CDY54909	Canola	cytoskeleton, cytosol, peroxisome	49.58	52.51
AT5G11420.1	Thale cress	extracellular, golgi, vacuole	53.2	52.19
CDX91217	Canola	extracellular	53.2	52.19
CDX85713	Canola	extracellular	53.2	52.19
VIT_04s0008g05010.t01	Wine grape	extracellular, golgi	53.48	52.17
PGSC0003DMT400074806	Potato	extracellular	53.48	51.75
CDY05493	Canola	extracellular	52.65	51.64
Bra020500.1-P	Field mustard	extracellular	52.65	51.64
Solyc08g067030.2.1	Tomato	extracellular	53.2	51.48
CDX75247	Canola	golgi	52.09	51.23
Bra011349.1-P	Field mustard	golgi	52.09	51.23
PGSC0003DMT400014547	Potato	extracellular	52.37	51.09
CDY19801	Canola	extracellular	52.65	51.08
CDX68849	Canola	golgi	51.81	50.96
Bra009841.1-P	Field mustard	extracellular	52.09	50.95
CDX88180	Canola	extracellular	52.09	50.95
CDX80511	Canola	extracellular	52.09	50.95
KRH05109	Soybean	nucleus	51.81	50.82
AT4G32460.1	Thale cress	endoplasmic reticulum, golgi	51.53	50.68
PGSC0003DMT400073388	Potato	mitochondrion	52.37	50.67
Solyc06g067910.2.1	Tomato	nucleus	52.37	50.54
KRH16010	Soybean	nucleus	51.25	50.27
AT5G25460.1	Thale cress	endoplasmic reticulum, extracellular	51.53	50.14
CDX97108	Canola	golgi	50.97	50.0
KRH09784	Soybean	nucleus	51.25	49.2
KRH23537	Soybean	nucleus	50.97	48.93
Solyc12g042930.1.1	Tomato	endoplasmic reticulum, golgi	51.53	48.68
Solyc03g120040.2.1	Tomato	extracellular, nucleus	34.26	47.67
KRH52489	Soybean	extracellular, golgi	49.03	47.57
VIT_09s0002g05930.t01	Wine grape	endoplasmic reticulum, extracellular	53.2	47.16
KRH52488	Soybean	extracellular	47.91	47.12
Zm00001d003187_P002	Maize	endoplasmic reticulum, plasma membrane	52.09	47.1
Zm00001d025754_P001	Maize	golgi	52.09	45.83
CDX80516	Canola	plastid	33.98	39.87
KRH44408	Soybean	golgi	48.47	39.82
Zm00001d043414_P001	Maize	plasma membrane	41.78	37.78
Zm00001d034547_P002	Maize	extracellular, vacuole	40.95	35.51
Zm00001d003185_P001	Maize	extracellular	65.74	34.1
Zm00001d012718_P004	Maize	endoplasmic reticulum, plasma membrane	39.0	33.41
Zm00001d015715_P001	Maize	plasma membrane	52.65	32.25

Protein Annotations

EnsemblPlants:Zm00001d003184_P001	EnsemblPlants:Zm00001d003184_T001	EnsemblPlantsGene:Zm00001d003184	Gene3D:2.60.120.260	InterPro:DUF642	InterPro:Galactose-bd-like_sf
InterPro:IPR008979	PANTHER:PTHR31265	PANTHER:PTHR31265:SF8	PFAM:PF04862	ProteinID:ONM16322.1	SEG:seg
SignalP:SignalP-noTM	SUPFAM:SSF49785	UniParc:UPI0008DB34AA	UniProt:A0A1D6E7A5	MapMan:35.2	:

Description

No Description!

Coordinates

chr2:-:34970572..34972451

Molecular Weight (calculated)

38634.0 Da

IEP (calculated)

6.581

GRAVY (calculated)

-0.139

Length

359 amino acids

Sequence
(BLAST)

001: MEPMRREPQT SMAGGTRSRC PVLLLLLLGV TARLASGVVS DGFVEYIGSG QKQDDMILPV PEGACAVRLG NDATIRQNLN LIRETTYSIT FCAARTCAQA
101: ERLKVSVAAE SGVLPIQTVY TSNGWDSYSY AFRARHSTAW FSIHNPGHED DPACGPLIDS VAIKALNPPH LTKESHTAGL SQRSEHADNM LRNGDFEEGP
201: VIFPDTAWGV LVPPMSEDDV SPLPGWMVMS DTKVVKYVDA AHHAVPRGAR AVELVAGREA ALVQEVRTVP GRHYRLSLAV GDAANGCEGP MAVEAYAARA
301: TLRTTYESRG NGGSKRAVVD FTAIANLTRV VLQSYNHHMK PDGTLCGPVV DDVSLVGLR

Best Arabidopsis Sequence Match ( AT1G80240.1 )
(BLAST)

001: MMYQEAALLL ALLFISSNVV LSAPVRDGLL PNGNFELGPK PSQMKGSVVK ERTAVPNWNI IGFVEFIKSG QKQDDMVLVV PQGSSAVRLG NEASISQKIS
101: VLPGRLYSIT FSAARTCAQD ERLNISVTHE SGVIPIQTMY GSDGWDSYSW AFKAGGPEIE IRFHNPGVEE HPACGPLIDA VAIKALFPPR FSGYNLIKNG
201: NFEEGPYVFP TAKWGVLIPP FIEDDNSPLP GWMIESLKAV KYVDKAHFAV PEGHRAIELV GGKESAISQI VRTSLNKFYA LTFNVGDARD GCEGPMIVEA
301: FAGQGKVMVD YASKGKGGFR RGRLVFKAVS ARTRVTFLST FYHMKSDHSG SLCGPVIDDV RLVAVGKLRG

Arabidopsis Description

At1g80240 [Source:UniProtKB/TrEMBL;Acc:Q9SSB7]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.