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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, cytoskeleton, peroxisome

Predictor Summary:
  • cytosol 3
  • plastid 1
  • mitochondrion 1
  • cytoskeleton 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytoskeleton, cytosol, peroxisome
Any Predictor:cytoskeleton, cytosol, mitochondrion, peroxisome, plastid
BaCelLo:cytosol
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX85713 Canola extracellular 99.41 92.35
CDX91217 Canola extracellular 99.12 92.08
AT5G11420.1 Thale cress extracellular, golgi, vacuole 94.41 87.7
Bra009841.1-P Field mustard extracellular 91.47 84.74
Bra020500.1-P Field mustard extracellular 90.0 83.61
Bra011349.1-P Field mustard golgi 82.06 76.44
VIT_04s0008g05010.t01 Wine grape extracellular, golgi 80.29 74.18
KRH16010 Soybean nucleus 77.35 71.86
KRH05109 Soybean nucleus 77.06 71.58
PGSC0003DMT400074806 Potato extracellular 75.59 69.27
Solyc08g067030.2.1 Tomato extracellular 75.59 69.27
GSMUA_Achr2P17020_001 Banana endoplasmic reticulum, vacuole 72.35 67.03
KRH52488 Soybean extracellular 71.76 66.85
GSMUA_Achr1P14570_001 Banana extracellular 72.35 66.85
GSMUA_Achr7P08400_001 Banana endoplasmic reticulum, extracellular, vacuole 72.06 66.76
GSMUA_Achr2P08300_001 Banana extracellular 71.18 65.58
KRH52489 Soybean extracellular, golgi 71.18 65.41
Os01t0611000-01 Rice extracellular 67.94 61.93
TraesCS7A01G453100.1 Wheat golgi 67.06 61.62
TraesCS7B01G353600.2 Wheat extracellular 67.06 61.62
TraesCS7D01G442500.1 Wheat golgi 67.06 61.62
Bra035192.1-P Field mustard extracellular 61.18 61.0
Bra003558.1-P Field mustard extracellular 65.88 60.7
HORVU6Hr1G037000.1 Barley extracellular 66.18 60.16
Os02t0205200-01 Rice mitochondrion, nucleus, plastid 64.41 60.0
TraesCS6B01G207200.1 Wheat extracellular 65.88 59.89
OQU87155 Sorghum golgi 65.88 59.73
TraesCS6A01G177500.1 Wheat extracellular 65.59 59.63
KXG29757 Sorghum golgi 65.0 59.41
Zm00001d044455_P001 Maize plasma membrane 65.29 58.27
TraesCS6D01G166800.1 Wheat extracellular, golgi, vacuole 57.06 57.06
Os04t0494950-01 Rice extracellular, vacuole 60.88 55.65
Bra040046.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 58.53 54.52
Os04t0494600-01 Rice extracellular 60.29 54.38
Bra029693.1-P Field mustard extracellular 58.24 54.25
Os02t0527500-00 Rice plastid 20.88 54.2
TraesCS2B01G455800.1 Wheat golgi 59.12 53.89
TraesCS2D01G432500.1 Wheat extracellular, golgi 58.82 53.62
EES11053 Sorghum endoplasmic reticulum, extracellular, vacuole 59.12 53.32
Zm00001d003186_P001 Maize extracellular 59.41 53.3
TraesCS5B01G390400.1 Wheat plastid 47.94 53.09
EES11052 Sorghum mitochondrion 59.12 53.03
HORVU2Hr1G085440.1 Barley extracellular 58.82 52.91
Os04t0494900-01 Rice extracellular 58.53 52.79
EES11054 Sorghum extracellular, vacuole 58.53 52.65
Zm00001d003183_P001 Maize extracellular, mitochondrion, plasma membrane, plastid 58.82 52.63
TraesCS2A01G434700.1 Wheat golgi 57.65 52.55
TraesCS2B01G369800.1 Wheat extracellular 57.94 52.53
TraesCS2D01G349800.1 Wheat mitochondrion 57.65 51.99
TraesCS2B01G369500.1 Wheat cytosol 54.71 51.96
Os04t0495000-00 Rice extracellular, golgi, vacuole 56.47 51.47
TraesCS2A01G351600.1 Wheat endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 57.06 51.46
TraesCS5D01G395400.1 Wheat extracellular 56.76 51.06
KXG26630 Sorghum extracellular 57.06 51.05
Zm00001d003184_P001 Maize endoplasmic reticulum, extracellular, mitochondrion, peroxisome 53.53 50.7
TraesCS2D01G349900.1 Wheat extracellular 54.41 50.68
TraesCS5A01G385400.1 Wheat extracellular 56.18 50.66
OQU81862 Sorghum cytosol, endoplasmic reticulum, golgi, mitochondrion 58.24 50.51
TraesCS2B01G369900.1 Wheat extracellular 54.12 50.41
TraesCS2B01G369700.1 Wheat endoplasmic reticulum, golgi 56.18 50.4
TraesCS2D01G349700.1 Wheat endoplasmic reticulum, golgi, mitochondrion 56.18 50.4
TraesCS2A01G351700.1 Wheat extracellular 53.82 50.14
TraesCS2A01G351400.1 Wheat extracellular 55.59 50.13
Bra004651.1-P Field mustard extracellular 54.41 50.0
HORVU2Hr1G085430.1 Barley endoplasmic reticulum, golgi 55.59 50.0
TraesCS2D01G349500.1 Wheat extracellular 54.71 49.34
Bra004650.1-P Field mustard extracellular 53.82 49.33
Bra016917.1-P Field mustard extracellular 54.12 49.2
TraesCS2A01G351500.1 Wheat extracellular, golgi 54.41 48.81
HORVU5Hr1G094750.2 Barley extracellular 55.0 48.45
TraesCS2B01G440300.1 Wheat extracellular 54.71 48.44
TraesCS2A01G421300.1 Wheat extracellular 54.12 47.79
TraesCS2B01G369300.1 Wheat endoplasmic reticulum, extracellular, vacuole 52.94 47.49
TraesCS2A01G351200.1 Wheat endoplasmic reticulum, extracellular, vacuole 52.65 47.23
TraesCS2D01G349200.1 Wheat endoplasmic reticulum, extracellular, vacuole 52.65 47.23
HORVU2Hr1G085370.2 Barley endoplasmic reticulum 49.71 44.47
KXG26629 Sorghum golgi 53.53 43.96
Zm00001d003187_P002 Maize endoplasmic reticulum, plasma membrane 51.18 43.83
Zm00001d025754_P001 Maize golgi 50.88 42.4
Bra005419.1-P Field mustard plasma membrane 49.12 41.75
Bra032349.1-P Field mustard extracellular, golgi, plasma membrane 48.82 40.59
Zm00001d015715_P001 Maize plasma membrane 65.29 37.88
HORVU2Hr1G085340.2 Barley mitochondrion, plastid 54.41 37.0
HORVU2Hr1G085520.2 Barley extracellular 33.24 30.96
Os03t0328501-00 Rice plastid 27.65 30.23
Bra006241.1-P Field mustard extracellular, plasma membrane 33.82 29.87
Zm00001d003185_P001 Maize extracellular 60.0 29.48
Os04t0494800-01 Rice extracellular 20.0 17.94
Os07t0132600-00 Rice mitochondrion, nucleus, plastid 17.94 16.71
Protein Annotations
EnsemblPlants:Bra023324.1EnsemblPlants:Bra023324.1-PEnsemblPlantsGene:Bra023324Gene3D:2.60.120.260GO:GO:0005575GO:GO:0005618
GO:GO:0005623GO:GO:0009505GO:GO:0030312InterPro:DUF642InterPro:Galactose-bd-like_sfInterPro:IPR008979
PANTHER:PTHR31265PANTHER:PTHR31265:SF23PFAM:PF04862SUPFAM:SSF49785UniParc:UPI0002543342UniProt:M4E3H2
MapMan:35.2:::::
Description
AT5G11420 (E=1e-190) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF642 (InterPro:IPR006946), Galactose-binding like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25460.1); Has 185 Blast hits to 157 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 185; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Coordinates
chrA02:+:2843126..2844766
Molecular Weight (calculated)
36994.4 Da
IEP (calculated)
6.527
GRAVY (calculated)
-0.092
Length
340 amino acids
Sequence
(BLAST)
001: MLPNGDFELG PKPSDMKGTQ VINKNAIPSW ELTGFVEYIK SGQKQGDMLL VVPAGKFAVR LGNEASIKQR LNVTKGMYYS LTFSAARTCA QDERLNISVA
101: PDSGVIPIQT VYSSSGWDLY AWAFQAESNV AEIVIHNPGE EEDPACGPLI DGVAIKALYP PRPTNKNILK NGGFEEGPYL LPNSTTGVLI PPFIEDDHSP
201: LPAWMIESLK AVKYVDVEHF SVPQGRRAVE LVAGKESAIA QVARTIIGKT YVLSFAVGDA NNACEGSMIV EAFAGRDTLK VPYESKGKGG FKRATLRFVA
301: VSTRTRVMFY STFYAMRSDD FSSLCGPVID DVKLLSVHKA
Best Arabidopsis Sequence Match ( AT5G11420.1 )
(BLAST)
001: MKGGSLSFLF VLLIATITSV ICFSDGMLPN GDFELGPKPS DMKGTQVINK KAIPSWELSG FVEYIKSGQK QGDMLLVVPA GKFAIRLGNE ASIKQRLNVT
101: KGMYYSLTFS AARTCAQDER LNISVAPDSG VIPIQTVYSS SGWDLYAWAF QAESNVAEIV IHNPGEEEDP ACGPLIDGVA IKALYPPRPT NKNILKNGGF
201: EEGPYVLPNA TTGVLVPPFI EDDHSPLPAW MVESLKAIKY VDVEHFSVPQ GRRAVELVAG KESAIAQVAR TVVGKTYVLS FAVGDANNAC QGSMVVEAFA
301: GKDTLKVPYE SRGKGGFKRA SLRFVAVSTR TRVMFYSTFY SMRSDDFSSL CGPVIDDVKL LSARKP
Arabidopsis Description
Uncharacterized protein At5g11420 [Source:UniProtKB/TrEMBL;Acc:Q9LYE7]
SUBAcon: [extracellular,golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.