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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 7
  • golgi 5
  • plastid 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:cytosol, plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY17255 Canola plasma membrane 99.75 99.75
AT2G34510.1 Thale cress vacuole 89.75 89.53
Bra032349.1-P Field mustard extracellular, golgi, plasma membrane 78.75 77.02
Solyc02g070540.2.1 Tomato endoplasmic reticulum, vacuole 71.5 73.15
PGSC0003DMT400054520 Potato endoplasmic reticulum, vacuole 70.75 72.38
KRH11195 Soybean endoplasmic reticulum 70.25 71.5
VIT_10s0003g03250.t01 Wine grape extracellular, golgi, plasma membrane 70.0 71.43
KRH21062 Soybean endoplasmic reticulum 69.75 70.99
Os01t0531400-00 Rice cytosol 45.75 66.3
GSMUA_Achr4P15090_001 Banana cytosol, endoplasmic reticulum, peroxisome 59.0 62.27
TraesCS3D01G294100.1 Wheat plasma membrane 60.75 61.68
TraesCS3B01G328900.1 Wheat plasma membrane 60.5 61.42
Os01t0756600-01 Rice plasma membrane 61.25 61.4
TraesCS3A01G294300.1 Wheat extracellular, golgi, plasma membrane 60.5 61.27
Zm00001d043414_P001 Maize plasma membrane 60.25 60.71
EES01494 Sorghum plasma membrane 59.75 60.05
GSMUA_Achr3P31400_001 Banana plasma membrane 63.0 56.25
Zm00001d012718_P004 Maize endoplasmic reticulum, plasma membrane 58.0 55.37
HORVU3Hr1G072860.3 Barley plastid 58.75 51.76
Bra023324.1-P Field mustard cytoskeleton, cytosol, peroxisome 41.75 49.12
Bra011349.1-P Field mustard golgi 44.5 48.77
Bra035192.1-P Field mustard extracellular 39.0 45.75
Bra020500.1-P Field mustard extracellular 41.5 45.36
Bra009841.1-P Field mustard extracellular 41.5 45.23
Bra003558.1-P Field mustard extracellular 40.5 43.9
Bra029693.1-P Field mustard extracellular 38.75 42.47
Bra040046.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 38.5 42.19
Bra004650.1-P Field mustard extracellular 37.5 40.43
Bra004651.1-P Field mustard extracellular 36.25 39.19
Bra016917.1-P Field mustard extracellular 36.5 39.04
Bra006241.1-P Field mustard extracellular, plasma membrane 29.5 30.65
Protein Annotations
EnsemblPlants:Bra005419.1EnsemblPlants:Bra005419.1-PEnsemblPlantsGene:Bra005419Gene3D:2.60.120.260InterPro:DUF642InterPro:Galactose-bd-like_sf
InterPro:IPR008979PANTHER:PTHR31265PANTHER:PTHR31265:SF1PFAM:PF04862SEG:segSignalP:SignalP-noTM
SUPFAM:SSF49785UniParc:UPI0002548016UniProt:M4CMI1MapMan:35.2::
Description
AT2G34510 (E=2e-204) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: anchored to membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF642 (InterPro:IPR006946), Galactose-binding like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G29980.1); Has 177 Blast hits to 163 proteins in 15 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Coordinates
chrA05:+:5389711..5392697
Molecular Weight (calculated)
43678.8 Da
IEP (calculated)
4.303
GRAVY (calculated)
-0.049
Length
400 amino acids
Sequence
(BLAST)
001: MVLYNNDSCK LVSTLMLLVG LCVFAAASDG KTSPVEDGLV VNGDFETPPS NGFPDDAMVQ DSTEIPSWRS DGTVELIKSG QKQGGMILIV PEGRHAVRLG
101: NDAEISQELA VEKGFIYSVT FSAARTCAQL ESLNVSVASD EPIASQTIDL QTLYSVQGWD PYAWAFEAVE DRVRLVFRNP GMEDDPTCGP IIDDIALKKL
201: FTPDKPKGNA VVNGDFEEGP WMFRNTTLGV LLPTNLDEET SSLPGWTVES NRAVRFIDSD HFSVPEGKRA VELLSGKEGI ISQMVETKAN VPYKMSFSLG
301: HAGDKCKEPL AVMAFAGDQA QNFHYMAQAN SSFEVSELNF TAKADRTRIA FYSVYYNTRM DDMSSLCGPV IDDVKVWFSG SSRIGFGLPV LVLVLALVFI
Best Arabidopsis Sequence Match ( AT2G34510.1 )
(BLAST)
001: MMLYSNNSWR SNSILILLLG LSIVAAADSA GKTSPVEDGL VVNGDFETPP SNGFPDDAII EDTSEIPSWR SDGTVELIKS GQKQGGMILI VPEGRHAVRL
101: GNDAEISQEL TVEKGSIYSV TFSAARTCAQ LESLNVSVAS SDEPIASQTI DLQTVYSVQG WDPYAWAFEA VVDRVRLVFK NPGMEDDPTC GPIIDDIAVK
201: KLFTPDKPKG NAVINGDFEE GPWMFRNTTL GVLLPTNLDE EISSLPGWTV ESNRAVRFID SDHFSVPEGK RALELLSGKE GIISQMVETK ANIPYKMSFS
301: LGHAGDKCKE PLAVMAFAGD QAQNFHYMAQ ANSSFERSEL NFTAKAERTR IAFYSIYYNT RTDDMTSLCG PVIDDVKVWF SGSSRIGFSF PLFILLSLVF
401: I
Arabidopsis Description
Uncharacterized protein At2g34510 [Source:UniProtKB/TrEMBL;Acc:O64696]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.