Factsheet for Bra035192.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 5
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87297	Canola	endoplasmic reticulum, extracellular	99.41	99.12
Bra003558.1-P	Field mustard	extracellular	90.03	83.2
AT1G80240.1	Thale cress	endoplasmic reticulum	87.98	81.08
Bra023324.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	61.0	61.18
Bra009841.1-P	Field mustard	extracellular	62.76	58.31
Bra020500.1-P	Field mustard	extracellular	62.46	58.2
Bra011349.1-P	Field mustard	golgi	60.7	56.71
Bra040046.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	50.73	47.4
Bra029693.1-P	Field mustard	extracellular	50.15	46.85
Bra004650.1-P	Field mustard	extracellular	48.39	44.47
Bra004651.1-P	Field mustard	extracellular	48.09	44.32
Bra016917.1-P	Field mustard	extracellular	47.21	43.05
Bra005419.1-P	Field mustard	plasma membrane	45.75	39.0
Bra032349.1-P	Field mustard	extracellular, golgi, plasma membrane	45.45	37.9
Bra006241.1-P	Field mustard	extracellular, plasma membrane	29.03	25.71

Protein Annotations

EnsemblPlants:Bra035192.1	EnsemblPlants:Bra035192.1-P	EnsemblPlantsGene:Bra035192	Gene3D:2.60.120.260	InterPro:DUF642	InterPro:Galactose-bd-like_sf
InterPro:IPR008979	PANTHER:PTHR31265	PANTHER:PTHR31265:SF9	PFAM:PF04862	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF49785	TMHMM:TMhelix	UniParc:UPI0002541E99	UniProt:M4F295	MapMan:35.2	:

Description

AT1G80240 (E=4e-153) | unknown protein

Coordinates

chrA07:+:22520756..22522038

Molecular Weight (calculated)

36915.3 Da

IEP (calculated)

6.628

GRAVY (calculated)

-0.041

Length

341 amino acids

Sequence
(BLAST)

001: MYQEVVLLLT LLCVSSSVVI SGPISDGLLP NGNFEMGPKP SQLKGSVVKG RTAVPNWEIT GFVEYIKAGQ KQDDMVLVVP EGSSAVRLGN EASISQKISV
101: RSGRLYSVTF SAARTCAQDE RLNISVTHES GVIPIQTMYG SDGWDSYSWA FKAGGPEIEI RIHNPGREEH PACGPLIDAV AIKALFPPRF SGNNLIKNGN
201: FEEGPYVFAK AKWGVLIPPF IEDDNSPLPG WMIESLKAVK YVDKAHFFVP EGHRAIELVG GKESAVSQIV RTTSLNKFYA LSFKVGDARD ACEGPMAVEA
301: FAGGRKILVD TFYHMKNDHS GSLCGPVIDD VRLVAVRTLG G

Best Arabidopsis Sequence Match ( AT1G80240.1 )
(BLAST)

001: MMYQEAALLL ALLFISSNVV LSAPVRDGLL PNGNFELGPK PSQMKGSVVK ERTAVPNWNI IGFVEFIKSG QKQDDMVLVV PQGSSAVRLG NEASISQKIS
101: VLPGRLYSIT FSAARTCAQD ERLNISVTHE SGVIPIQTMY GSDGWDSYSW AFKAGGPEIE IRFHNPGVEE HPACGPLIDA VAIKALFPPR FSGYNLIKNG
201: NFEEGPYVFP TAKWGVLIPP FIEDDNSPLP GWMIESLKAV KYVDKAHFAV PEGHRAIELV GGKESAISQI VRTSLNKFYA LTFNVGDARD GCEGPMIVEA
301: FAGQGKVMVD YASKGKGGFR RGRLVFKAVS ARTRVTFLST FYHMKSDHSG SLCGPVIDDV RLVAVGKLRG

Arabidopsis Description

At1g80240 [Source:UniProtKB/TrEMBL;Acc:Q9SSB7]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.