Factsheet for Bra029693.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35979	Canola	extracellular	100.0	100.0
AT3G08030.1	Thale cress	extracellular	91.23	91.23
Bra040046.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	90.14	90.14
VIT_13s0064g00460.t01	Wine grape	extracellular	71.23	72.22
Solyc01g087540.2.1	Tomato	extracellular	70.68	70.3
PGSC0003DMT400017671	Potato	extracellular	70.68	70.3
KRH32968	Soybean	endoplasmic reticulum	66.85	66.48
KRH13974	Soybean	nucleus	66.3	65.94
GSMUA_Achr9P25300_001	Banana	extracellular, vacuole	65.21	65.56
KRH23881	Soybean	extracellular	60.82	62.89
KRH39918	Soybean	endoplasmic reticulum, extracellular, golgi	64.93	60.77
Bra023324.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	54.25	58.24
Bra004651.1-P	Field mustard	extracellular	58.08	57.3
EER93244	Sorghum	extracellular, vacuole	60.55	57.25
Bra016917.1-P	Field mustard	extracellular	56.44	55.08
Bra011349.1-P	Field mustard	golgi	55.07	55.07
Bra009841.1-P	Field mustard	extracellular	55.07	54.77
Os03t0807700-01	Rice	plastid	58.9	54.71
Bra004650.1-P	Field mustard	extracellular	55.07	54.18
Bra020500.1-P	Field mustard	extracellular	54.25	54.1
TraesCS5D01G469800.1	Wheat	extracellular, vacuole	58.08	53.4
Zm00001d034547_P002	Maize	extracellular, vacuole	60.27	53.14
GSMUA_Achr6P29630_001	Banana	cytosol, plastid	44.11	50.95
HORVU5Hr1G109880.2	Barley	golgi, vacuole	57.81	50.6
Bra035192.1-P	Field mustard	extracellular	46.85	50.15
Bra003558.1-P	Field mustard	extracellular	50.68	50.14
TraesCS5A01G458700.1	Wheat	extracellular, golgi	58.08	49.07
Os07t0206900-01	Rice	cytosol, peroxisome	11.23	41.84
Bra005419.1-P	Field mustard	plasma membrane	42.47	38.75
Bra032349.1-P	Field mustard	extracellular, golgi, plasma membrane	43.29	38.63
Bra006241.1-P	Field mustard	extracellular, plasma membrane	30.41	28.83

Protein Annotations

EnsemblPlants:Bra029693.1	EnsemblPlants:Bra029693.1-P	EnsemblPlantsGene:Bra029693	Gene3D:2.60.120.260	InterPro:DUF642	InterPro:Galactose-bd-like_sf
InterPro:IPR008979	PANTHER:PTHR31265	PANTHER:PTHR31265:SF2	PFAM:PF04862	SEG:seg	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI0002547DEB	UniProt:M4ELM5	MapMan:35.2	:	:

Description

AT3G08030 (E=3e-185) | unknown protein

Coordinates

chrA05:-:22629966..22631530

Molecular Weight (calculated)

39121.5 Da

IEP (calculated)

9.234

GRAVY (calculated)

0.073

Length

365 amino acids

Sequence
(BLAST)

001: MAVSKAIVIP LLLVLCAAAL GAPAYEGFLR NGNFEESPKK TDMKKTVLLG KTALPEWVTT GFVEYIAGGP QPGGMYFPVA HGVHAVRLGN EAKISQKLKV
101: KPGSLYALTF GASRTCAQDE VLRVSVPPQS GDLPLQTLYN SFGGDVYAWA FVAKTSVVTV TFHNPGVQED PACGPLLDAV AIKELVHPMY TKGNLVKNGG
201: FEEGPHRLVN STQGVLLPPK QEDLTSPLPG WIIESLKAVK FIDSKYFNVP FGQAAIELLA GRESAIAQVI RTSPGQTYTL SFAVGDAKND CHGSMMVEAF
301: AARDTLKVPH TSVGGGHFKM ASFKFKAIGA RTRITFFSGY YHSKKMDMGS LCGPVIDQIV VSRVA

Best Arabidopsis Sequence Match ( AT3G08030.1 )
(BLAST)

001: MAVPKAIILP ILLLICGAAL GAPASEGYLR NGNFEESPKK TDMKKTVLLG KNALPEWETT GFVEYIAGGP QPGGMYFPVA HGVHAVRLGN EATISQKLEV
101: KPGSLYALTF GASRTCAQDE VLRVSVPSQS GDLPLQTLYN SFGGDVYAWA FVAKTSQVTV TFHNPGVQED PACGPLLDAV AIKELVHPIY TRGNLVKNGG
201: FEEGPHRLVN STQGVLLPPK QEDLTSPLPG WIIESLKAVK FIDSKYFNVP FGHAAIELVA GKESAIAQVI RTSPGQTYTL SFVVGDAKND CHGSMMVEAF
301: AARDTLKVPH TSVGGGHVKT ASFKFKAVEA RTRITFFSGF YHTKKTDTVS LCGPVIDEIV VSHVA

Arabidopsis Description

F17A17.37 protein [Source:UniProtKB/TrEMBL;Acc:Q9SFB1]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.