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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, vacuole

Predictor Summary:
  • golgi 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, vacuole
Any Predictor:golgi, vacuole
MultiLoc:golgi
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G469800.1 Wheat extracellular, vacuole 92.09 96.73
TraesCS5A01G458700.1 Wheat extracellular, golgi 92.33 89.12
Os03t0807700-01 Rice plastid 82.97 88.04
EER93244 Sorghum extracellular, vacuole 81.3 87.82
Zm00001d034547_P002 Maize extracellular, vacuole 79.38 79.95
GSMUA_Achr9P25300_001 Banana extracellular, vacuole 58.99 67.77
VIT_13s0064g00460.t01 Wine grape extracellular 53.72 62.22
PGSC0003DMT400017671 Potato extracellular 53.72 61.04
VIT_08s0007g08460.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 53.48 60.76
Solyc01g087540.2.1 Tomato extracellular 53.0 60.22
KRH13974 Soybean nucleus 52.52 59.67
CDX79913 Canola cytosol 30.46 59.62
KRH32968 Soybean endoplasmic reticulum 52.28 59.4
CDY28002 Canola extracellular 50.84 58.08
CDY35979 Canola extracellular 50.6 57.81
Bra029693.1-P Field mustard extracellular 50.6 57.81
KRH23881 Soybean extracellular 48.92 57.79
CDY48764 Canola cytosol 27.82 57.71
CDY22149 Canola extracellular 50.36 57.53
Bra040046.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 50.36 57.53
AT3G08030.1 Thale cress extracellular 50.12 57.26
Os07t0206900-01 Rice cytosol, peroxisome 13.19 56.12
Bra004651.1-P Field mustard extracellular 49.16 55.41
KRH39918 Soybean endoplasmic reticulum, extracellular, golgi 51.08 54.62
AT2G41810.1 Thale cress extracellular, vacuole 48.44 54.59
CDY14785 Canola extracellular, vacuole 48.2 54.32
AT2G41800.1 Thale cress extracellular, vacuole 47.96 54.05
Bra016917.1-P Field mustard extracellular 48.44 54.01
Bra004650.1-P Field mustard extracellular 47.96 53.91
CDY06908 Canola extracellular 47.96 53.48
GSMUA_Achr6P29630_001 Banana cytosol, plastid 39.81 52.53
Solyc04g015620.2.1 Tomato plastid 44.36 50.0
Solyc04g015610.2.1 Tomato extracellular 43.88 49.59
HORVU6Hr1G037000.1 Barley extracellular 42.93 47.86
PGSC0003DMT400081713 Potato endoplasmic reticulum, extracellular, plasma membrane 22.78 46.34
CDX79912 Canola extracellular, vacuole 48.92 45.33
HORVU2Hr1G085440.1 Barley extracellular 41.01 45.24
CDY48765 Canola extracellular 47.96 45.15
HORVU2Hr1G085430.1 Barley endoplasmic reticulum, golgi 37.41 41.27
HORVU5Hr1G094750.2 Barley extracellular 37.41 40.41
HORVU2Hr1G085370.2 Barley endoplasmic reticulum 32.61 35.79
HORVU2Hr1G085340.2 Barley mitochondrion, plastid 41.01 34.2
HORVU3Hr1G072860.3 Barley plastid 35.73 32.82
HORVU2Hr1G085520.2 Barley extracellular 20.86 23.84
Protein Annotations
EnsemblPlants:HORVU5Hr1G109880.2EnsemblPlantsGene:HORVU5Hr1G109880Gene3D:2.60.120.260GO:GO:0005575GO:GO:0005618GO:GO:0005623
GO:GO:0005886GO:GO:0016020GO:GO:0030312InterPro:DUF642InterPro:Galactose-bd-like_sfInterPro:IPR008979
PANTHER:PTHR31265PANTHER:PTHR31265:SF2PFAM:PF04862SEG:segSUPFAM:SSF49785UniParc:UPI000B467E1D
UniProt:A0A287SPL9MapMan:35.2::::
Description
No Description!
Coordinates
chrchr5H:+:631201808..631203887
Molecular Weight (calculated)
43955.8 Da
IEP (calculated)
9.671
GRAVY (calculated)
0.064
Length
417 amino acids
Sequence
(BLAST)
001: PKRKKKVIEL ISFSQEPASP SSLAMELPWG ALLLALLCVS ASSAVATLAV TAPPPAPARA PAPVTAPAPP QAQDAEGLLM NGNFETAPRK VNKTLIVGRH
101: SLPGWTLRGH VEYVSAGPQP GGMFFAVPHG VHALRLGSHA SASQNVSVRP GSLYALTFAA TRTCAQDEAL RIAVSPSLSA PADVAVRTLY SADTADTWAW
201: GFRASSPVAQ VTFSNPGLQE DAACGPLIDA VAIKELPTPY PTKDNLIKND GFEIGPQVFK NSSVGVLLPP KQKDVTSPLP GWIIESLKAV RYIDAAHFSV
301: PAGQYAVELV AGRESAIAQV IRTVPNRAYN LSYVVGDAKN GCHGSMLVEA FAANVTQKVP FESRGKGGFK ASSLRFVAAG ARTRVTFYSS YYHTKVTDGV
401: SLCGPVLDQV KIVPLKL
Best Arabidopsis Sequence Match ( AT3G08030.1 )
(BLAST)
001: MAVPKAIILP ILLLICGAAL GAPASEGYLR NGNFEESPKK TDMKKTVLLG KNALPEWETT GFVEYIAGGP QPGGMYFPVA HGVHAVRLGN EATISQKLEV
101: KPGSLYALTF GASRTCAQDE VLRVSVPSQS GDLPLQTLYN SFGGDVYAWA FVAKTSQVTV TFHNPGVQED PACGPLLDAV AIKELVHPIY TRGNLVKNGG
201: FEEGPHRLVN STQGVLLPPK QEDLTSPLPG WIIESLKAVK FIDSKYFNVP FGHAAIELVA GKESAIAQVI RTSPGQTYTL SFVVGDAKND CHGSMMVEAF
301: AARDTLKVPH TSVGGGHVKT ASFKFKAVEA RTRITFFSGF YHTKKTDTVS LCGPVIDEIV VSHVA
Arabidopsis Description
F17A17.37 protein [Source:UniProtKB/TrEMBL;Acc:Q9SFB1]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.