Factsheet for VIT_13s0064g00460.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400017671	Potato	extracellular	81.39	79.84
Solyc01g087540.2.1	Tomato	extracellular	80.56	79.02
KRH32968	Soybean	endoplasmic reticulum	75.83	74.39
KRH13974	Soybean	nucleus	74.72	73.3
Bra029693.1-P	Field mustard	extracellular	72.22	71.23
CDY35979	Canola	extracellular	72.22	71.23
CDY28002	Canola	extracellular	71.94	70.96
AT3G08030.1	Thale cress	extracellular	71.67	70.68
Bra040046.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	71.11	70.14
CDY22149	Canola	extracellular	71.11	70.14
GSMUA_Achr9P25300_001	Banana	extracellular, vacuole	68.33	67.77
KRH23881	Soybean	extracellular	66.39	67.71
KRH39918	Soybean	endoplasmic reticulum, extracellular, golgi	72.22	66.67
VIT_08s0007g08460.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	65.83	64.58
EER93244	Sorghum	extracellular, vacuole	63.61	59.33
Os03t0807700-01	Rice	plastid	62.22	57.0
TraesCS5D01G469800.1	Wheat	extracellular, vacuole	61.94	56.17
Zm00001d034547_P002	Maize	extracellular, vacuole	63.33	55.07
HORVU5Hr1G109880.2	Barley	golgi, vacuole	62.22	53.72
VIT_04s0008g05010.t01	Wine grape	extracellular, golgi	54.17	52.99
TraesCS5A01G458700.1	Wheat	extracellular, golgi	61.94	51.62
GSMUA_Achr6P29630_001	Banana	cytosol, plastid	44.72	50.95
VIT_09s0002g05930.t01	Wine grape	endoplasmic reticulum, extracellular	54.17	48.15
VIT_10s0003g03250.t01	Wine grape	extracellular, golgi, plasma membrane	44.44	40.82
Os07t0206900-01	Rice	cytosol, peroxisome	9.72	35.71
VIT_14s0068g02080.t01	Wine grape	extracellular, plasma membrane, vacuole	27.78	25.19

Protein Annotations

EntrezGene:100258445	wikigene:100258445	MapMan:35.2	ProteinID:CCB49528	ProteinID:CCB49528.1	InterPro:DUF642
UniProt:F6HBC6	EMBL:FN595509	InterPro:Galactose-bd-like_sf	InterPro:IPR008979	EntrezGene:LOC100258445	wikigene:LOC100258445
PFAM:PF04862	PANTHER:PTHR31265	PANTHER:PTHR31265:SF2	SUPFAM:SSF49785	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI000210A9F1	ArrayExpress:VIT_13s0064g00460	EnsemblPlantsGene:VIT_13s0064g00460	EnsemblPlants:VIT_13s0064g00460.t01	RefSeq:XP_002276894	RefSeq:XP_002276894.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr13:-:22075603..22078576

Molecular Weight (calculated)

38877.8 Da

IEP (calculated)

7.984

GRAVY (calculated)

-0.023

Length

360 amino acids

Sequence
(BLAST)

001: MAVLISLLLA LSSVFFTGPA FAGTYLEGLL PNGNFEESPK PTDLKKTVIK GKYSLPKWEI NGSVEYIAGG PQPGGMFFAV AHGVHAVRLG NEASISQTIP
101: VKPGSLYALT FGASRTCAQD EVLRVSVPPQ TGDLPLQTLY DSFGGDVYAW GFRATSNEAK VTFHNTGVQE DPACGPLLDA VAIKELFPPM PTRDNLVKNS
201: GFEEGPHLLI NSSNGVLLPP KQEDLTSPLP GWIIESLKAV KFIDKKHFNV PFGLAAVELL AGRESAIAQV LRTVPNKLYN LTFSIGDGKN GCHGDMMIEA
301: FAAKDSFKAP FKSRGKGEFK TVSFKFKAIA ARTRLTFFSS FYHTRIDDFG SLCGPVLDQP

Best Arabidopsis Sequence Match ( AT3G08030.1 )
(BLAST)

001: MAVPKAIILP ILLLICGAAL GAPASEGYLR NGNFEESPKK TDMKKTVLLG KNALPEWETT GFVEYIAGGP QPGGMYFPVA HGVHAVRLGN EATISQKLEV
101: KPGSLYALTF GASRTCAQDE VLRVSVPSQS GDLPLQTLYN SFGGDVYAWA FVAKTSQVTV TFHNPGVQED PACGPLLDAV AIKELVHPIY TRGNLVKNGG
201: FEEGPHRLVN STQGVLLPPK QEDLTSPLPG WIIESLKAVK FIDSKYFNVP FGHAAIELVA GKESAIAQVI RTSPGQTYTL SFVVGDAKND CHGSMMVEAF
301: AARDTLKVPH TSVGGGHVKT ASFKFKAVEA RTRITFFSGF YHTKKTDTVS LCGPVIDEIV VSHVA

Arabidopsis Description

F17A17.37 protein [Source:UniProtKB/TrEMBL;Acc:Q9SFB1]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.