CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, golgi
Any Predictor:	plastid, secretory
BaCelLo:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH23881	Soybean	extracellular	86.15	95.18
KRH32968	Soybean	endoplasmic reticulum	76.15	80.93
KRH13974	Soybean	nucleus	75.13	79.84
VIT_13s0064g00460.t01	Wine grape	extracellular	66.67	72.22
PGSC0003DMT400017671	Potato	extracellular	67.44	71.66
Solyc01g087540.2.1	Tomato	extracellular	66.67	70.84
Bra029693.1-P	Field mustard	extracellular	60.77	64.93
CDY35979	Canola	extracellular	60.77	64.93
CDY28002	Canola	extracellular	60.77	64.93
CDY22149	Canola	extracellular	60.51	64.66
Bra040046.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	60.51	64.66
AT3G08030.1	Thale cress	extracellular	60.26	64.38
GSMUA_Achr9P25300_001	Banana	extracellular, vacuole	57.44	61.71
EER93244	Sorghum	extracellular, vacuole	55.9	56.48
Os03t0807700-01	Rice	plastid	54.87	54.45
TraesCS5D01G469800.1	Wheat	extracellular, vacuole	54.62	53.65
Zm00001d034547_P002	Maize	extracellular, vacuole	56.92	53.62
KRH16010	Soybean	nucleus	48.46	51.64
KRH05109	Soybean	nucleus	48.21	51.37
HORVU5Hr1G109880.2	Barley	golgi, vacuole	54.62	51.08
GSMUA_Achr6P29630_001	Banana	cytosol, plastid	41.28	50.95
TraesCS5A01G458700.1	Wheat	extracellular, golgi	54.62	49.31
KRH52488	Soybean	extracellular	44.62	47.67
KRH09784	Soybean	nucleus	45.13	47.06
KRH23537	Soybean	nucleus	44.62	46.52
KRH52489	Soybean	extracellular, golgi	43.59	45.95
Os07t0206900-01	Rice	cytosol, peroxisome	10.26	40.82
KRH44408	Soybean	golgi	45.64	40.73
KRH11195	Soybean	endoplasmic reticulum	35.38	35.11
KRH21062	Soybean	endoplasmic reticulum	34.87	34.61

Protein Annotations

EMBL:ACUP02006012	EnsemblPlants:KRH39918	EnsemblPlantsGene:GLYMA_09G228000	EntrezGene:100812299	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:DUF642	PANTHER:PTHR31265	PANTHER:PTHR31265:SF2	PFAM:PF04862	ProteinID:KRH39918
ProteinID:KRH39918.1	TMHMM:TMhelix	UniParc:UPI00023C8A16	UniProt:I1L5M2	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr9:-:45231587..45233726

Molecular Weight (calculated)

42841.1 Da

IEP (calculated)

8.794

GRAVY (calculated)

-0.004

Length

390 amino acids

Sequence
(BLAST)

001: MERGALLATC GLLLQHKTEW LVRMSETFIF TLSLVMLCAA SAFAAVPHRL PEVYLKNGNF EENPNPKYLK KTTLIGKYAL PKWEISGHVE YVSGGPQPGG
101: MYFPVSHGVH AVRLGNEASI SQTIKVKPGK WYALILGASR TCAQDEVLRI SVPPQSGEVP LQTLYSLNGD VIAWGFRPTS SVAKVILHNP GIQEDPACGP
201: LLDAVAIAEF CPPKPTRANL VKNPGFEVGP FPIFNSTNGV LLPPEQEDHV SPLPGWMIES LKAVKFIDAK HFNVPFGQGA VELIAGRESV IAQILRTVPN
301: KIYNMKFTIG DARNGCHGSM MIEAFAAKDT LKVPFKSEGK GEFKTVSFKF RAIENRTRIT FYSSFYHTRI HDYGSLCGPV IDQVIVYPVA

Best Arabidopsis Sequence Match ( AT3G08030.1 )
(BLAST)

001: MAVPKAIILP ILLLICGAAL GAPASEGYLR NGNFEESPKK TDMKKTVLLG KNALPEWETT GFVEYIAGGP QPGGMYFPVA HGVHAVRLGN EATISQKLEV
101: KPGSLYALTF GASRTCAQDE VLRVSVPSQS GDLPLQTLYN SFGGDVYAWA FVAKTSQVTV TFHNPGVQED PACGPLLDAV AIKELVHPIY TRGNLVKNGG
201: FEEGPHRLVN STQGVLLPPK QEDLTSPLPG WIIESLKAVK FIDSKYFNVP FGHAAIELVA GKESAIAQVI RTSPGQTYTL SFVVGDAKND CHGSMMVEAF
301: AARDTLKVPH TSVGGGHVKT ASFKFKAVEA RTRITFFSGF YHTKKTDTVS LCGPVIDEIV VSHVA

Arabidopsis Description

F17A17.37 protein [Source:UniProtKB/TrEMBL;Acc:Q9SFB1]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.