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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
 nucleus: 21132161
endoplasmic reticulum: 27224218
nucleus: 28499913
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH23537 Soybean nucleus 97.59 97.59
PGSC0003DMT400073388 Potato mitochondrion 69.25 69.81
KRH16010 Soybean nucleus 68.18 69.67
KRH05109 Soybean nucleus 68.18 69.67
GSMUA_Achr1P14570_001 Banana extracellular 67.65 68.75
Solyc06g067910.2.1 Tomato nucleus 68.18 68.55
GSMUA_Achr2P08300_001 Banana extracellular 66.58 67.48
VIT_09s0002g05930.t01 Wine grape endoplasmic reticulum, extracellular 72.46 66.91
PGSC0003DMT400073682 Potato cytosol 59.63 66.57
KRH44408 Soybean golgi 77.54 66.36
PGSC0003DMT400014547 Potato extracellular 64.97 66.03
KRH52488 Soybean extracellular 64.44 66.03
GSMUA_Achr7P08400_001 Banana endoplasmic reticulum, extracellular, vacuole 63.9 65.12
GSMUA_Achr2P17020_001 Banana endoplasmic reticulum, vacuole 63.9 65.12
Solyc12g042930.1.1 Tomato endoplasmic reticulum, golgi 66.04 65.0
KRH52489 Soybean extracellular, golgi 64.17 64.86
Solyc03g120040.2.1 Tomato extracellular, nucleus 44.65 64.73
KXG29757 Sorghum golgi 59.89 60.22
TraesCS7B01G353600.2 Wheat extracellular 59.09 59.73
HORVU6Hr1G037000.1 Barley extracellular 59.63 59.63
TraesCS7D01G442500.1 Wheat golgi 58.82 59.46
TraesCS6B01G207200.1 Wheat extracellular 59.36 59.36
Os01t0611000-01 Rice extracellular 59.09 59.25
TraesCS6A01G177500.1 Wheat extracellular 59.09 59.09
TraesCS7A01G453100.1 Wheat golgi 58.29 58.92
OQU87155 Sorghum golgi 58.82 58.67
Os02t0205200-01 Rice mitochondrion, nucleus, plastid 56.68 58.08
Zm00001d044455_P001 Maize plasma membrane 58.29 57.22
TraesCS6D01G166800.1 Wheat extracellular, golgi, vacuole 51.6 56.76
Os04t0494950-01 Rice extracellular, vacuole 54.55 54.84
Os04t0494900-01 Rice extracellular 55.08 54.64
EES11052 Sorghum mitochondrion 55.08 54.35
Os04t0494600-01 Rice extracellular 54.01 53.58
Zm00001d003186_P001 Maize extracellular 54.28 53.56
TraesCS2B01G369800.1 Wheat extracellular 53.21 53.07
TraesCS2D01G349800.1 Wheat mitochondrion 53.21 52.79
Zm00001d003183_P001 Maize extracellular, mitochondrion, plasma membrane, plastid 53.48 52.63
TraesCS2B01G455800.1 Wheat golgi 52.41 52.55
TraesCS2A01G351600.1 Wheat endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 52.94 52.52
EES11054 Sorghum extracellular, vacuole 52.94 52.38
HORVU2Hr1G085440.1 Barley extracellular 52.94 52.38
TraesCS2A01G434700.1 Wheat golgi 52.14 52.28
TraesCS2B01G369500.1 Wheat cytosol 50.0 52.23
OQU81862 Sorghum cytosol, endoplasmic reticulum, golgi, mitochondrion 54.55 52.04
TraesCS2D01G432500.1 Wheat extracellular, golgi 51.87 52.01
Os02t0527500-00 Rice plastid 18.18 51.91
TraesCS2A01G351700.1 Wheat extracellular 50.53 51.78
Os04t0495000-00 Rice extracellular, golgi, vacuole 51.6 51.74
KXG26630 Sorghum extracellular 52.41 51.58
Zm00001d003184_P001 Maize endoplasmic reticulum, extracellular, mitochondrion, peroxisome 49.2 51.25
TraesCS2B01G369900.1 Wheat extracellular 50.0 51.23
TraesCS2D01G349700.1 Wheat endoplasmic reticulum, golgi, mitochondrion 51.87 51.19
TraesCS5B01G390400.1 Wheat plastid 41.98 51.14
TraesCS2D01G349900.1 Wheat extracellular 49.73 50.96
TraesCS2B01G369700.1 Wheat endoplasmic reticulum, golgi 51.6 50.92
TraesCS5A01G385400.1 Wheat extracellular 51.07 50.66
EES11053 Sorghum endoplasmic reticulum, extracellular, vacuole 50.8 50.4
TraesCS2A01G351400.1 Wheat extracellular 50.8 50.4
TraesCS2D01G349500.1 Wheat extracellular 50.8 50.4
TraesCS2A01G351500.1 Wheat extracellular, golgi 51.07 50.4
TraesCS5D01G395400.1 Wheat extracellular 50.8 50.26
HORVU2Hr1G085430.1 Barley endoplasmic reticulum, golgi 50.8 50.26
TraesCS2B01G369300.1 Wheat endoplasmic reticulum, extracellular, vacuole 49.73 49.08
TraesCS2A01G351200.1 Wheat endoplasmic reticulum, extracellular, vacuole 49.73 49.08
HORVU5Hr1G094750.2 Barley extracellular 50.53 48.96
TraesCS2D01G349200.1 Wheat endoplasmic reticulum, extracellular, vacuole 49.47 48.81
KRH32968 Soybean endoplasmic reticulum 47.86 48.77
KRH13974 Soybean nucleus 47.06 47.96
TraesCS2B01G440300.1 Wheat extracellular 49.2 47.92
TraesCS2A01G421300.1 Wheat extracellular 48.4 47.01
Zm00001d003187_P002 Maize endoplasmic reticulum, plasma membrane 49.2 46.35
KRH23881 Soybean extracellular 43.05 45.61
Zm00001d025754_P001 Maize golgi 49.73 45.59
HORVU2Hr1G085370.2 Barley endoplasmic reticulum 46.26 45.53
KXG26629 Sorghum golgi 50.27 45.41
KRH39918 Soybean endoplasmic reticulum, extracellular, golgi 47.06 45.13
KRH11195 Soybean endoplasmic reticulum 43.05 40.97
KRH21062 Soybean endoplasmic reticulum 43.05 40.97
HORVU2Hr1G085340.2 Barley mitochondrion, plastid 51.07 38.2
Zm00001d015715_P001 Maize plasma membrane 58.56 37.37
HORVU2Hr1G085520.2 Barley extracellular 31.02 31.78
Os03t0328501-00 Rice plastid 25.13 30.23
Zm00001d003185_P001 Maize extracellular 53.48 28.9
Os04t0494800-01 Rice extracellular 19.25 19.0
Os07t0132600-00 Rice mitochondrion, nucleus, plastid 16.04 16.44
Protein Annotations
EMBL:ACUP02009109EnsemblPlants:KRH09784EnsemblPlantsGene:GLYMA_15G011000Gene3D:2.60.120.260InterPro:DUF642InterPro:Galactose-bd-like_sf
InterPro:IPR008979PANTHER:PTHR31265PANTHER:PTHR31265:SF9PFAM:PF04862ProteinID:KRH09784ProteinID:KRH09784.1
SignalP:SignalP-noTMSUPFAM:SSF49785UniParc:UPI000233B452UniProt:I1MCI8MapMan:35.2:
Description
hypothetical protein
Coordinates
chr15:-:832371..835631
Molecular Weight (calculated)
40762.9 Da
IEP (calculated)
8.436
GRAVY (calculated)
-0.124
Length
374 amino acids
Sequence
(BLAST)
001: MQSLKLQLVL FLSISTSHAV FSFTDGLLPN GNFEQGPKPS QLKGSVVTGH DAIPNWTISG FVEYIKSGQK QGDMLLVVPE GDYAVRLGNE ASIKQKLKLI
101: KGSFYSITFS AARTCAQEEK LNVSVVPTTE KRDWGIIPIQ TMYGSNGWES FTCGFRADFP EAQIVIHNPG KEEDPACGPL IDSVALKVLY PPKRTRANLL
201: KNGNFEEGPY IFPNSSWGAL IPPHIEDSHG PLPGWIVESL KAVKYIDSDH FAVPEGKRAI ELVAGKESAL AQVVITTIGK TYDLTFAVGD ANNACESSMM
301: VEAFAGTNTV QVPYQSKGKG GFVRGKLRFK AVSTRTRLRF LSTFYTMKSD NSGSLCGPVI DDVKLLGVRY PTLA
Best Arabidopsis Sequence Match ( AT5G11420.1 )
(BLAST)
001: MKGGSLSFLF VLLIATITSV ICFSDGMLPN GDFELGPKPS DMKGTQVINK KAIPSWELSG FVEYIKSGQK QGDMLLVVPA GKFAIRLGNE ASIKQRLNVT
101: KGMYYSLTFS AARTCAQDER LNISVAPDSG VIPIQTVYSS SGWDLYAWAF QAESNVAEIV IHNPGEEEDP ACGPLIDGVA IKALYPPRPT NKNILKNGGF
201: EEGPYVLPNA TTGVLVPPFI EDDHSPLPAW MVESLKAIKY VDVEHFSVPQ GRRAVELVAG KESAIAQVAR TVVGKTYVLS FAVGDANNAC QGSMVVEAFA
301: GKDTLKVPYE SRGKGGFKRA SLRFVAVSTR TRVMFYSTFY SMRSDDFSSL CGPVIDDVKL LSARKP
Arabidopsis Description
Uncharacterized protein At5g11420 [Source:UniProtKB/TrEMBL;Acc:Q9LYE7]
SUBAcon: [golgi,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.