Factsheet for Zm00001d003185_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
golgi 4
plasma membrane 4
endoplasmic reticulum 4
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES11054	Sorghum	extracellular, vacuole	44.65	81.75
Os04t0494950-01	Rice	extracellular, vacuole	36.99	68.82
TraesCS2B01G369800.1	Wheat	extracellular	36.71	67.73
HORVU2Hr1G085440.1	Barley	extracellular	36.85	67.46
TraesCS2D01G349800.1	Wheat	mitochondrion	36.71	67.37
TraesCS2A01G351600.1	Wheat	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	36.71	67.37
Zm00001d003183_P001	Maize	extracellular, mitochondrion, plasma membrane, plastid	36.85	67.11
Zm00001d003184_P001	Maize	endoplasmic reticulum, extracellular, mitochondrion, peroxisome	34.1	65.74
Zm00001d003186_P001	Maize	extracellular	35.12	64.12
Zm00001d044455_P001	Maize	plasma membrane	33.81	61.42
GSMUA_Achr1P14570_001	Banana	extracellular	32.66	61.41
GSMUA_Achr2P08300_001	Banana	extracellular	32.23	60.43
Bra023324.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	29.48	60.0
CDY54909	Canola	cytoskeleton, cytosol, peroxisome	28.76	58.7
VIT_04s0008g05010.t01	Wine grape	extracellular, golgi	30.35	57.07
Solyc03g120040.2.1	Tomato	extracellular, nucleus	21.24	56.98
CDX85713	Canola	extracellular	29.91	56.56
CDX91217	Canola	extracellular	29.91	56.56
AT4G32460.1	Thale cress	endoplasmic reticulum, golgi	29.77	56.44
AT5G11420.1	Thale cress	extracellular, golgi, vacuole	29.77	56.28
Bra011349.1-P	Field mustard	golgi	29.62	56.16
CDX68849	Canola	golgi	29.62	56.16
CDX75247	Canola	golgi	29.62	56.16
Solyc08g067030.2.1	Tomato	extracellular	29.91	55.8
PGSC0003DMT400074806	Potato	extracellular	29.91	55.8
PGSC0003DMT400014547	Potato	extracellular	29.48	55.43
Bra009841.1-P	Field mustard	extracellular	29.19	55.04
CDX80511	Canola	extracellular	29.19	55.04
CDX88180	Canola	extracellular	29.19	55.04
CDY05493	Canola	extracellular	29.05	54.92
Bra020500.1-P	Field mustard	extracellular	29.05	54.92
PGSC0003DMT400073388	Potato	mitochondrion	29.34	54.72
CDX97108	Canola	golgi	28.9	54.64
PGSC0003DMT400073682	Potato	cytosol	26.45	54.63
KRH05109	Soybean	nucleus	28.76	54.37
KRH16010	Soybean	nucleus	28.76	54.37
Solyc06g067910.2.1	Tomato	nucleus	29.19	54.3
AT5G25460.1	Thale cress	endoplasmic reticulum, extracellular	28.9	54.2
CDY19801	Canola	extracellular	28.76	53.78
KRH09784	Soybean	nucleus	28.9	53.48
KRH23537	Soybean	nucleus	28.76	53.21
VIT_09s0002g05930.t01	Wine grape	endoplasmic reticulum, extracellular	30.64	52.35
KRH52489	Soybean	extracellular, golgi	27.89	52.16
Zm00001d003187_P002	Maize	endoplasmic reticulum, plasma membrane	29.77	51.89
Solyc12g042930.1.1	Tomato	endoplasmic reticulum, golgi	28.47	51.84
KRH52488	Soybean	extracellular	27.31	51.78
Zm00001d025754_P001	Maize	golgi	30.2	51.23
KRH44408	Soybean	golgi	28.18	44.62
CDX80516	Canola	plastid	18.21	41.18
Zm00001d043414_P001	Maize	plasma membrane	22.98	40.05
Zm00001d034547_P002	Maize	extracellular, vacuole	23.55	39.37
Zm00001d012718_P004	Maize	endoplasmic reticulum, plasma membrane	21.97	36.28
Zm00001d015715_P001	Maize	plasma membrane	29.91	35.32

Protein Annotations

EnsemblPlants:Zm00001d003185_P001	EnsemblPlants:Zm00001d003185_T001	EnsemblPlantsGene:Zm00001d003185	Gene3D:2.60.120.260	InterPro:DUF642	InterPro:Galactose-bd-like_sf
InterPro:IPR008979	PANTHER:PTHR31265	PANTHER:PTHR31265:SF8	PFAM:PF04862	ProteinID:ONM16323.1	SEG:seg
SUPFAM:SSF49785	UniParc:UPI000842E12C	UniProt:A0A1D6E7A6	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr2:-:34991165..34998444

Molecular Weight (calculated)

73969.4 Da

IEP (calculated)

6.900

GRAVY (calculated)

-0.202

Length

692 amino acids

Sequence
(BLAST)

001: MKKTNCLPNY CLLLAAFPEF FVSSQKQTAC WQLPNGNFED APARSQLNGT QVLGLYAIPR WEVSGFVEYI GSGQRQGDII HSSSRCRREP TPCGWGTRPP
101: SGSGWPCRGA RATPSPSAPR APAPRPLNVT VAPDSDVLPI QTVYASSGWD SYSWAFEARH GAVTLIVHNP GVSEDPACGP LLDSFAIKAL RPPPVPTKNN
201: MLQNGDFEEG PYMFPGVPWG GAGAVPPVDE DDYSPLPPWM VLSATKSVKY LDAAHHAVPR GAHAVELLSG TEAALAQDVA TVAGRPYRLE FSAGDGCVGS
301: LSVRAYAARG SVTVPHASRG KGGHRRGVLD FTAVAKPDAG GVRLLPNGNF EQGPDKYQMN GTWVIGRKSI PCWEISGFVE YIVSGQQQDN GMVVAVPEGA
401: RAVRLGNDAS IRQRLTGMTR GTSYSVTFSA SRTCAQAEQL NVSVAPESGV LPIQTVYTSS GWDSYSYAFR ARHSAAWLVI HNPGVEEDPA CGPVIDSVAI
501: KALHPPSRTA KDNMLKNGDF EEGPYVFPDT PWGVLVPPMD EDDVSPLPGW TVMSDTKAVK YLDAAHFAVP RGSRAVELVA GTEAALVQEV RTTPGRSYTL
601: SFSAGDAADG CAGALRVDAY AARGRLPVSY ESRGTGGFVR NELEFAAVAN LTRVVFQSMG HYMKPDGTLC GPVVDDVSLV AVHKHAARRL FM

Best Arabidopsis Sequence Match ( AT5G11420.1 )
(BLAST)

001: MKGGSLSFLF VLLIATITSV ICFSDGMLPN GDFELGPKPS DMKGTQVINK KAIPSWELSG FVEYIKSGQK QGDMLLVVPA GKFAIRLGNE ASIKQRLNVT
101: KGMYYSLTFS AARTCAQDER LNISVAPDSG VIPIQTVYSS SGWDLYAWAF QAESNVAEIV IHNPGEEEDP ACGPLIDGVA IKALYPPRPT NKNILKNGGF
201: EEGPYVLPNA TTGVLVPPFI EDDHSPLPAW MVESLKAIKY VDVEHFSVPQ GRRAVELVAG KESAIAQVAR TVVGKTYVLS FAVGDANNAC QGSMVVEAFA
301: GKDTLKVPYE SRGKGGFKRA SLRFVAVSTR TRVMFYSTFY SMRSDDFSSL CGPVIDDVKL LSARKP

Arabidopsis Description

Uncharacterized protein At5g11420 [Source:UniProtKB/TrEMBL;Acc:Q9LYE7]
SUBAcon: [extracellular,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.