Factsheet for PGSC0003DMT400073682

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g042930.1.1	Tomato	endoplasmic reticulum, golgi	96.12	84.74
PGSC0003DMT400073388	Potato	mitochondrion	81.79	73.85
PGSC0003DMT400014547	Potato	extracellular	80.6	73.37
KRH09784	Soybean	nucleus	66.57	59.63
KRH23537	Soybean	nucleus	66.27	59.36
GSMUA_Achr1P14570_001	Banana	extracellular	64.18	58.42
VIT_09s0002g05930.t01	Wine grape	endoplasmic reticulum, extracellular	69.85	57.78
GSMUA_Achr2P17020_001	Banana	endoplasmic reticulum, vacuole	63.28	57.77
GSMUA_Achr7P08400_001	Banana	endoplasmic reticulum, extracellular, vacuole	63.28	57.77
PGSC0003DMT400074806	Potato	extracellular	63.28	57.14
GSMUA_Achr2P08300_001	Banana	extracellular	61.79	56.1
Os02t0205200-01	Rice	mitochondrion, nucleus, plastid	56.42	51.78
TraesCS7B01G353600.2	Wheat	extracellular	57.01	51.62
TraesCS7A01G453100.1	Wheat	golgi	57.01	51.62
TraesCS7D01G442500.1	Wheat	golgi	56.72	51.35
TraesCS6A01G177500.1	Wheat	extracellular	57.31	51.34
HORVU6Hr1G037000.1	Barley	extracellular	57.31	51.34
TraesCS6B01G207200.1	Wheat	extracellular	57.01	51.07
KRH44408	Soybean	golgi	66.57	51.03
KXG29757	Sorghum	golgi	56.42	50.81
Os01t0611000-01	Rice	extracellular	56.42	50.67
TraesCS6D01G166800.1	Wheat	extracellular, golgi, vacuole	51.34	50.59
Zm00001d003184_P001	Maize	endoplasmic reticulum, extracellular, mitochondrion, peroxisome	54.03	50.42
TraesCS5B01G390400.1	Wheat	plastid	45.97	50.16
OQU87155	Sorghum	golgi	56.12	50.13
TraesCS2B01G455800.1	Wheat	golgi	55.52	49.87
TraesCS2D01G432500.1	Wheat	extracellular, golgi	55.52	49.87
TraesCS2A01G434700.1	Wheat	golgi	55.52	49.87
Zm00001d044455_P001	Maize	plasma membrane	55.52	48.82
Zm00001d003186_P001	Maize	extracellular	55.22	48.81
EES11053	Sorghum	endoplasmic reticulum, extracellular, vacuole	54.93	48.81
TraesCS2A01G351700.1	Wheat	extracellular	53.13	48.77
EES11052	Sorghum	mitochondrion	54.93	48.55
TraesCS2B01G369800.1	Wheat	extracellular	54.33	48.53
TraesCS2D01G349800.1	Wheat	mitochondrion	54.33	48.28
TraesCS2A01G351600.1	Wheat	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	54.33	48.28
Zm00001d003183_P001	Maize	extracellular, mitochondrion, plasma membrane, plastid	54.63	48.16
Os02t0527500-00	Rice	plastid	18.81	48.09
Os04t0494900-01	Rice	extracellular	54.03	48.01
Os04t0495000-00	Rice	extracellular, golgi, vacuole	53.43	47.99
TraesCS2D01G349900.1	Wheat	extracellular	52.24	47.95
HORVU2Hr1G085440.1	Barley	extracellular	54.03	47.88
OQU81862	Sorghum	cytosol, endoplasmic reticulum, golgi, mitochondrion	55.82	47.7
TraesCS2B01G369900.1	Wheat	extracellular	51.94	47.67
Os04t0494950-01	Rice	extracellular, vacuole	52.84	47.58
Os04t0494600-01	Rice	extracellular	53.43	47.48
EES11054	Sorghum	extracellular, vacuole	53.13	47.09
TraesCS2B01G369500.1	Wheat	cytosol	48.96	45.81
KXG26630	Sorghum	extracellular	51.94	45.79
TraesCS5D01G395400.1	Wheat	extracellular	51.64	45.77
PGSC0003DMT400017671	Potato	extracellular	49.85	45.5
TraesCS5A01G385400.1	Wheat	extracellular	51.04	45.36
HORVU2Hr1G085430.1	Barley	endoplasmic reticulum, golgi	51.04	45.24
TraesCS2B01G369700.1	Wheat	endoplasmic reticulum, golgi	51.04	45.12
TraesCS2D01G349700.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	50.75	44.85
TraesCS2A01G351400.1	Wheat	extracellular	50.45	44.83
TraesCS2A01G351500.1	Wheat	extracellular, golgi	50.15	44.33
HORVU5Hr1G094750.2	Barley	extracellular	50.45	43.78
TraesCS2D01G349500.1	Wheat	extracellular	49.25	43.77
TraesCS2A01G421300.1	Wheat	extracellular	49.55	43.12
TraesCS2B01G440300.1	Wheat	extracellular	49.25	42.97
TraesCS2D01G349200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	48.36	42.74
TraesCS2A01G351200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	48.36	42.74
TraesCS2B01G369300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	47.76	42.22
Zm00001d003187_P002	Maize	endoplasmic reticulum, plasma membrane	49.55	41.81
PGSC0003DMT400054520	Potato	endoplasmic reticulum, vacuole	47.76	40.92
Zm00001d025754_P001	Maize	golgi	49.25	40.44
KXG26629	Sorghum	golgi	49.55	40.1
HORVU2Hr1G085370.2	Barley	endoplasmic reticulum	44.78	39.47
HORVU2Hr1G085340.2	Barley	mitochondrion, plastid	49.55	33.2
PGSC0003DMT400081713	Potato	endoplasmic reticulum, extracellular, plasma membrane	20.3	33.17
Zm00001d015715_P001	Maize	plasma membrane	56.12	32.08
Os03t0328501-00	Rice	plastid	28.06	30.23
HORVU2Hr1G085520.2	Barley	extracellular	29.85	27.4
Zm00001d003185_P001	Maize	extracellular	54.63	26.45
Os04t0494800-01	Rice	extracellular	21.19	18.73
Os07t0132600-00	Rice	mitochondrion, nucleus, plastid	19.1	17.53

Protein Annotations

EnsemblPlants:PGSC0003DMT400073682	EnsemblPlantsGene:PGSC0003DMG400028619	Gene3D:2.60.120.260	InterPro:DUF642	InterPro:Galactose-bd-like_sf	InterPro:IPR008979
PANTHER:PTHR31265	PANTHER:PTHR31265:SF9	PFAM:PF04862	PGSC:PGSC0003DMG400028619	UniParc:UPI000296BAE6	UniProt:M1CSG3
MapMan:35.2	:	:	:	:	:

Description

Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400028619]

Coordinates

chr12:-:49905750..49907781

Molecular Weight (calculated)

37293.5 Da

IEP (calculated)

7.218

GRAVY (calculated)

-0.293

Length

335 amino acids

Sequence
(BLAST)

001: MKKTRVIDPH GIPHWELSGY VEYIKSGQMQ GDMLLPVPQG DYAVRLGEDA SLKTKVINVT KETFYSLSFV FARTCAQEER LNVSVSPNSE PKDWGMLPLQ
101: TMYSSDGWDT YSWGFLAEAN EIDIVLHNPI AHEKDPACGP LIDFVALKAL KTTHRPKDNM LKNGNFEEGP YIFPNTTWGV LIPPNIEDDH CPLPGWIVES
201: LKAVKYVDAD HFTVPEGKRA IELVAGRESA IAQQVITKAG RIYDLTFSVG DANNSCEGSM VVEAFAGNVA LQFKYVSKGK GGFKRAKLRF TATSQRTRVR
301: FLSSYYHMKS DNSGSLCGPV VDDVRLVSVR NPRIP

Best Arabidopsis Sequence Match ( AT5G11420.1 )
(BLAST)

001: MKGGSLSFLF VLLIATITSV ICFSDGMLPN GDFELGPKPS DMKGTQVINK KAIPSWELSG FVEYIKSGQK QGDMLLVVPA GKFAIRLGNE ASIKQRLNVT
101: KGMYYSLTFS AARTCAQDER LNISVAPDSG VIPIQTVYSS SGWDLYAWAF QAESNVAEIV IHNPGEEEDP ACGPLIDGVA IKALYPPRPT NKNILKNGGF
201: EEGPYVLPNA TTGVLVPPFI EDDHSPLPAW MVESLKAIKY VDVEHFSVPQ GRRAVELVAG KESAIAQVAR TVVGKTYVLS FAVGDANNAC QGSMVVEAFA
301: GKDTLKVPYE SRGKGGFKRA SLRFVAVSTR TRVMFYSTFY SMRSDDFSSL CGPVIDDVKL LSARKP

Arabidopsis Description

Uncharacterized protein At5g11420 [Source:UniProtKB/TrEMBL;Acc:Q9LYE7]
SUBAcon: [extracellular,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.