CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 5
golgi 7
plasma membrane 5
endoplasmic reticulum 5
vacuole 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G207200.1	Wheat	extracellular	86.83	86.36
TraesCS6A01G177500.1	Wheat	extracellular	86.56	86.1
HORVU6Hr1G037000.1	Barley	extracellular	86.29	85.83
TraesCS6D01G166800.1	Wheat	extracellular, golgi, vacuole	77.96	85.29
Os02t0205200-01	Rice	mitochondrion, nucleus, plastid	83.06	84.66
GSMUA_Achr7P08400_001	Banana	endoplasmic reticulum, extracellular, vacuole	73.66	74.66
GSMUA_Achr2P17020_001	Banana	endoplasmic reticulum, vacuole	70.97	71.93
Os02t0527500-00	Rice	plastid	25.27	71.76
VIT_04s0008g05010.t01	Wine grape	extracellular, golgi	68.01	68.75
Bra023324.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	59.41	65.0
CDX68849	Canola	golgi	62.9	64.11
CDX75247	Canola	golgi	62.63	63.84
Bra011349.1-P	Field mustard	golgi	62.63	63.84
CDY54909	Canola	cytoskeleton, cytosol, peroxisome	57.8	63.42
CDX97108	Canola	golgi	62.37	63.39
PGSC0003DMT400074806	Potato	extracellular	63.17	63.34
AT4G32460.1	Thale cress	endoplasmic reticulum, golgi	62.1	63.29
AT5G11420.1	Thale cress	extracellular, golgi, vacuole	62.1	63.11
Solyc08g067030.2.1	Tomato	extracellular	62.9	63.07
KRH16010	Soybean	nucleus	61.56	62.57
CDX88180	Canola	extracellular	61.29	62.13
CDX80511	Canola	extracellular	61.29	62.13
Bra009841.1-P	Field mustard	extracellular	61.29	62.13
KRH05109	Soybean	nucleus	61.02	62.02
CDX91217	Canola	extracellular	61.02	62.02
OQU87155	Sorghum	golgi	62.37	61.87
AT5G25460.1	Thale cress	endoplasmic reticulum, extracellular	61.29	61.79
CDX85713	Canola	extracellular	60.75	61.75
KRH52489	Soybean	extracellular, golgi	61.29	61.62
CDY19801	Canola	extracellular	61.29	61.62
KRH52488	Soybean	extracellular	60.22	61.37
Bra020500.1-P	Field mustard	extracellular	60.22	61.2
CDY05493	Canola	extracellular	60.22	61.2
KRH09784	Soybean	nucleus	60.22	59.89
KRH23537	Soybean	nucleus	60.22	59.89
Zm00001d015715_P001	Maize	plasma membrane	93.55	59.39
VIT_09s0002g05930.t01	Wine grape	endoplasmic reticulum, extracellular	64.25	59.01
Solyc06g067910.2.1	Tomato	nucleus	58.87	58.87
PGSC0003DMT400073388	Potato	mitochondrion	58.6	58.76
Solyc03g120040.2.1	Tomato	extracellular, nucleus	40.59	58.53
PGSC0003DMT400014547	Potato	extracellular	57.53	58.15
KXG26630	Sorghum	extracellular	57.8	56.58
PGSC0003DMT400073682	Potato	cytosol	50.81	56.42
EES11052	Sorghum	mitochondrion	57.26	56.2
Solyc12g042930.1.1	Tomato	endoplasmic reticulum, golgi	57.26	56.05
OQU81862	Sorghum	cytosol, endoplasmic reticulum, golgi, mitochondrion	58.6	55.61
EES11054	Sorghum	extracellular, vacuole	55.65	54.76
EES11053	Sorghum	endoplasmic reticulum, extracellular, vacuole	54.57	53.85
KRH44408	Soybean	golgi	59.41	50.57
CDX80516	Canola	plastid	40.05	48.69
KXG26629	Sorghum	golgi	52.96	47.58
EER93244	Sorghum	extracellular, vacuole	49.19	47.41
EES01494	Sorghum	plasma membrane	44.62	41.71

Protein Annotations

EnsemblPlants:KXG29757	EnsemblPlantsGene:SORBI_3004G086500	Gene3D:2.60.120.260	InterPro:DUF642	InterPro:Galactose-bd-like_sf	InterPro:IPR008979
PANTHER:PTHR31265	PANTHER:PTHR31265:SF3	PFAM:PF04862	ProteinID:KXG29757	ProteinID:KXG29757.1	SEG:seg
SignalP:SignalP-noTM	UniParc:UPI0007F270A1	UniProt:A0A194YNI1	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr4:-:7275919..7277742

Molecular Weight (calculated)

39819.7 Da

IEP (calculated)

9.323

GRAVY (calculated)

-0.046

Length

372 amino acids

Sequence
(BLAST)

001: MGRLSMAVPV MLLLLCATCR LALGITDGLL PNGNFERGPA PSQLRGTRVM GSSAIPAWQT SGFVEYIPSG RKQGDMVLVV PEGAYAVRLG NEASIRQRLH
101: GAARGARYSL TFSAARTCAQ AEQLNVSASG QSGLLAMQTM YSSNGWDSYA WAWVADADEV DVVIHNPGVT EDPACGPLID SVAIKTLNPP RRTNKNLVKN
201: GDFEEGPYII PGTKWGVLIP SRVVDDHSPL PGWMVESLKA IKYIDSDSFA VPRGRRAVEL LAGRESAIAQ VIRTVPGRQY ALSFTVGDAS NACRGSLMVE
301: AYAGRESTKV AYESAGKGGV KRAVLPFRAA SARTRLVFFS SFYSTRSDDL SSLCGPVLDD VAVVSVRTTK RG

Best Arabidopsis Sequence Match ( AT4G32460.1 )
(BLAST)

001: MKEMGVIVLL LLHSFFYVAF CFNDGLLPNG DFELGPRHSD MKGTQVINIT AIPNWELSGF VEYIPSGHKQ GDMILVVPKG AFAVRLGNEA SIKQKISVKK
101: GSYYSITFSA ARTCAQDERL NVSVAPHHAV MPIQTVYSSS GWDLYSWAFK AQSDYADIVI HNPGVEEDPA CGPLIDGVAM RALFPPRPTN KNILKNGGFE
201: EGPWVLPNIS SGVLIPPNSI DDHSPLPGWM VESLKAVKYI DSDHFSVPQG RRAVELVAGK ESAVAQVVRT IPGKTYVLSF SVGDASNACA GSMIVEAFAG
301: KDTIKVPYES KGKGGFKRSS LRFVAVSSRT RVMFYSTFYA MRNDDFSSLC GPVIDDVKLL SARRP

Arabidopsis Description

At4g32460 [Source:UniProtKB/TrEMBL;Acc:Q8LAR0]
SUBAcon: [golgi,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.