CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 6
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH52488	Soybean	extracellular	87.57	88.77
VIT_04s0008g05010.t01	Wine grape	extracellular, golgi	74.59	75.0
KRH16010	Soybean	nucleus	73.78	74.59
KRH05109	Soybean	nucleus	72.97	73.77
Bra023324.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	65.41	71.18
CDY54909	Canola	cytoskeleton, cytosol, peroxisome	64.05	69.91
CDX85713	Canola	extracellular	67.03	67.76
GSMUA_Achr1P14570_001	Banana	extracellular	67.3	67.66
AT5G11420.1	Thale cress	extracellular, golgi, vacuole	66.76	67.49
CDX91217	Canola	extracellular	66.76	67.49
CDX68849	Canola	golgi	66.49	67.4
CDX75247	Canola	golgi	66.22	67.12
Bra011349.1-P	Field mustard	golgi	66.22	67.12
AT4G32460.1	Thale cress	endoplasmic reticulum, golgi	66.22	67.12
AT5G25460.1	Thale cress	endoplasmic reticulum, extracellular	66.22	66.4
CDX97108	Canola	golgi	65.41	66.12
CDY05493	Canola	extracellular	65.14	65.85
Bra020500.1-P	Field mustard	extracellular	65.14	65.85
CDX88180	Canola	extracellular	64.86	65.4
Bra009841.1-P	Field mustard	extracellular	64.86	65.4
CDX80511	Canola	extracellular	64.86	65.4
Solyc08g067030.2.1	Tomato	extracellular	65.14	64.96
CDY19801	Canola	extracellular	64.86	64.86
GSMUA_Achr2P08300_001	Banana	extracellular	64.59	64.77
PGSC0003DMT400074806	Potato	extracellular	64.86	64.69
GSMUA_Achr2P17020_001	Banana	endoplasmic reticulum, vacuole	64.05	64.58
KRH23537	Soybean	nucleus	64.86	64.17
KRH09784	Soybean	nucleus	64.86	64.17
GSMUA_Achr7P08400_001	Banana	endoplasmic reticulum, extracellular, vacuole	63.24	63.76
HORVU6Hr1G037000.1	Barley	extracellular	62.97	62.3
TraesCS6B01G207200.1	Wheat	extracellular	62.7	62.03
TraesCS6A01G177500.1	Wheat	extracellular	62.43	61.76
KXG29757	Sorghum	golgi	61.62	61.29
Os01t0611000-01	Rice	extracellular	61.08	60.59
Os02t0205200-01	Rice	mitochondrion, nucleus, plastid	59.46	60.27
TraesCS7B01G353600.2	Wheat	extracellular	60.27	60.27
OQU87155	Sorghum	golgi	60.54	59.73
TraesCS7A01G453100.1	Wheat	golgi	59.73	59.73
TraesCS6D01G166800.1	Wheat	extracellular, golgi, vacuole	54.86	59.71
TraesCS7D01G442500.1	Wheat	golgi	59.19	59.19
Zm00001d044455_P001	Maize	plasma membrane	60.0	58.27
KRH44408	Soybean	golgi	64.05	54.23
TraesCS2A01G351600.1	Wheat	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	54.59	53.58
Os04t0494950-01	Rice	extracellular, vacuole	53.51	53.23
TraesCS2D01G349800.1	Wheat	mitochondrion	54.05	53.05
HORVU2Hr1G085440.1	Barley	extracellular	54.05	52.91
TraesCS2B01G369800.1	Wheat	extracellular	53.51	52.8
TraesCS2B01G455800.1	Wheat	golgi	52.97	52.55
TraesCS2D01G432500.1	Wheat	extracellular, golgi	52.43	52.01
Os04t0494600-01	Rice	extracellular	52.97	51.99
Zm00001d003186_P001	Maize	extracellular	53.24	51.98
Os02t0527500-00	Rice	plastid	18.38	51.91
TraesCS2A01G434700.1	Wheat	golgi	52.16	51.74
Os04t0494900-01	Rice	extracellular	52.16	51.19
TraesCS2B01G369900.1	Wheat	extracellular	50.27	50.96
EES11053	Sorghum	endoplasmic reticulum, extracellular, vacuole	51.89	50.93
EES11052	Sorghum	mitochondrion	52.16	50.92
KXG26630	Sorghum	extracellular	52.16	50.79
TraesCS2A01G351700.1	Wheat	extracellular	50.0	50.68
CDX80516	Canola	plastid	41.89	50.65
TraesCS2B01G369500.1	Wheat	cytosol	48.92	50.56
OQU81862	Sorghum	cytosol, endoplasmic reticulum, golgi, mitochondrion	53.51	50.51
Os04t0495000-00	Rice	extracellular, golgi, vacuole	50.81	50.4
TraesCS2B01G369700.1	Wheat	endoplasmic reticulum, golgi	51.62	50.4
TraesCS2D01G349700.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	51.62	50.4
Zm00001d003183_P001	Maize	extracellular, mitochondrion, plasma membrane, plastid	51.62	50.26
TraesCS2D01G349900.1	Wheat	extracellular	49.46	50.14
TraesCS5B01G390400.1	Wheat	plastid	41.35	49.84
EES11054	Sorghum	extracellular, vacuole	50.81	49.74
HORVU2Hr1G085430.1	Barley	endoplasmic reticulum, golgi	50.27	49.21
TraesCS2A01G351500.1	Wheat	extracellular, golgi	50.27	49.08
TraesCS2D01G349500.1	Wheat	extracellular	50.0	49.07
Zm00001d003184_P001	Maize	endoplasmic reticulum, extracellular, mitochondrion, peroxisome	47.57	49.03
TraesCS5D01G395400.1	Wheat	extracellular	50.0	48.94
TraesCS2A01G351400.1	Wheat	extracellular	49.73	48.81
TraesCS5A01G385400.1	Wheat	extracellular	49.19	48.28
HORVU5Hr1G094750.2	Barley	extracellular	49.19	47.15
KRH13974	Soybean	nucleus	46.49	46.87
KRH32968	Soybean	endoplasmic reticulum	46.22	46.59
KRH23881	Soybean	extracellular	43.24	45.33
TraesCS2B01G369300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	46.22	45.12
TraesCS2A01G351200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	45.95	44.85
TraesCS2D01G349200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	45.68	44.59
KRH11195	Soybean	endoplasmic reticulum	47.03	44.27
KRH21062	Soybean	endoplasmic reticulum	46.49	43.77
KRH39918	Soybean	endoplasmic reticulum, extracellular, golgi	45.95	43.59
Zm00001d003187_P002	Maize	endoplasmic reticulum, plasma membrane	46.76	43.58
TraesCS2B01G440300.1	Wheat	extracellular	45.14	43.49
TraesCS2A01G421300.1	Wheat	extracellular	44.86	43.12
Zm00001d025754_P001	Maize	golgi	47.3	42.89
KXG26629	Sorghum	golgi	47.84	42.75
HORVU2Hr1G085370.2	Barley	endoplasmic reticulum	41.89	40.79
Zm00001d015715_P001	Maize	plasma membrane	59.46	37.54
HORVU2Hr1G085340.2	Barley	mitochondrion, plastid	50.54	37.4
HORVU2Hr1G085520.2	Barley	extracellular	31.08	31.51
Os03t0328501-00	Rice	plastid	25.68	30.55
Zm00001d003185_P001	Maize	extracellular	52.16	27.89
Os04t0494800-01	Rice	extracellular	19.73	19.26
Os07t0132600-00	Rice	mitochondrion, nucleus, plastid	17.03	17.26

Protein Annotations

EMBL:ACUP02003419	EnsemblPlants:KRH52489	EnsemblPlantsGene:GLYMA_06G071000	Gene3D:2.60.120.260	InterPro:DUF642	InterPro:Galactose-bd-like_sf
InterPro:IPR008979	PANTHER:PTHR31265	PANTHER:PTHR31265:SF3	PFAM:PF04862	ProteinID:KRH52489	ProteinID:KRH52489.1
SignalP:SignalP-noTM	SUPFAM:SSF49785	TMHMM:TMhelix	UniParc:UPI000233A44A	UniProt:I1K8Y0	MapMan:35.2

Description

hypothetical protein

Coordinates

chr6:-:5424118..5427196

Molecular Weight (calculated)

40754.1 Da

IEP (calculated)

7.861

GRAVY (calculated)

-0.056

Length

370 amino acids

Sequence
(BLAST)

001: MERFSFLLVL FCCFHVAFSF THVINGEFEL GPKPQDMKGT VVTGGPHSIP GWEISGFIEY IKSGQKQDDM LLVVPNGAYA VRLGNEASIK QNLKVVKGMY
101: YSITFVVART CAQEEKLNVS AAPDWVVLPM QTVYGGNGWD AYAWSFRADY PSVDMVFHNP GKEEDPACGP IIDSIAIQPL YPPRLTNKNV LKNGGFEEGP
201: YVFPNTSSGV LIPPNIVDHI EHSPLPGWMV ESLKAVRYID SDHFSVPKGK RAVELIGGKE SAIAQVARTI PGKTYTLFFA VGDAGNSCEG SLSVEAYVGK
301: ESVKVPYESK GKGGFKRATL KFVAVSTRTR ILFLSTFYNM RSDDLASLCG PVIDDVTLIS LRKPHRRFHI

Best Arabidopsis Sequence Match ( AT5G11420.1 )
(BLAST)

001: MKGGSLSFLF VLLIATITSV ICFSDGMLPN GDFELGPKPS DMKGTQVINK KAIPSWELSG FVEYIKSGQK QGDMLLVVPA GKFAIRLGNE ASIKQRLNVT
101: KGMYYSLTFS AARTCAQDER LNISVAPDSG VIPIQTVYSS SGWDLYAWAF QAESNVAEIV IHNPGEEEDP ACGPLIDGVA IKALYPPRPT NKNILKNGGF
201: EEGPYVLPNA TTGVLVPPFI EDDHSPLPAW MVESLKAIKY VDVEHFSVPQ GRRAVELVAG KESAIAQVAR TVVGKTYVLS FAVGDANNAC QGSMVVEAFA
301: GKDTLKVPYE SRGKGGFKRA SLRFVAVSTR TRVMFYSTFY SMRSDDFSSL CGPVIDDVKL LSARKP

Arabidopsis Description

Uncharacterized protein At5g11420 [Source:UniProtKB/TrEMBL;Acc:Q9LYE7]
SUBAcon: [golgi,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.