Factsheet for GSMUA_Achr2P17020_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 5
golgi 5
plasma membrane 5
endoplasmic reticulum 6
vacuole 6
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P08400_001	Banana	endoplasmic reticulum, extracellular, vacuole	89.37	89.37
Bra023324.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	67.03	72.35
KXG29757	Sorghum	golgi	71.93	70.97
VIT_04s0008g05010.t01	Wine grape	extracellular, golgi	70.3	70.11
HORVU6Hr1G037000.1	Barley	extracellular	71.39	70.05
TraesCS6B01G207200.1	Wheat	extracellular	71.12	69.79
GSMUA_Achr2P08300_001	Banana	extracellular	70.03	69.65
GSMUA_Achr1P14570_001	Banana	extracellular	69.75	69.57
TraesCS6A01G177500.1	Wheat	extracellular	70.57	69.25
CDX91217	Canola	extracellular	68.94	69.13
CDY54909	Canola	cytoskeleton, cytosol, peroxisome	63.76	69.03
CDX85713	Canola	extracellular	68.66	68.85
TraesCS6D01G166800.1	Wheat	extracellular, golgi, vacuole	63.76	68.82
Os02t0205200-01	Rice	mitochondrion, nucleus, plastid	67.57	67.95
AT5G11420.1	Thale cress	extracellular, golgi, vacuole	67.3	67.49
CDX97108	Canola	golgi	66.76	66.94
PGSC0003DMT400074806	Potato	extracellular	67.03	66.31
CDX75247	Canola	golgi	65.94	66.3
CDX68849	Canola	golgi	65.94	66.3
Bra011349.1-P	Field mustard	golgi	65.94	66.3
CDX88180	Canola	extracellular	66.21	66.21
CDX80511	Canola	extracellular	66.21	66.21
Bra009841.1-P	Field mustard	extracellular	66.21	66.21
AT5G25460.1	Thale cress	endoplasmic reticulum, extracellular	66.48	66.12
Solyc08g067030.2.1	Tomato	extracellular	66.76	66.04
AT4G32460.1	Thale cress	endoplasmic reticulum, golgi	65.4	65.75
CDY19801	Canola	extracellular	65.94	65.41
KRH16010	Soybean	nucleus	65.12	65.3
KRH05109	Soybean	nucleus	64.85	65.03
CDY05493	Canola	extracellular	64.85	65.03
Bra020500.1-P	Field mustard	extracellular	64.85	65.03
KRH52489	Soybean	extracellular, golgi	64.58	64.05
KRH09784	Soybean	nucleus	65.12	63.9
PGSC0003DMT400073388	Potato	mitochondrion	64.58	63.88
KRH52488	Soybean	extracellular	63.49	63.84
Solyc06g067910.2.1	Tomato	nucleus	64.58	63.71
KRH23537	Soybean	nucleus	64.58	63.37
PGSC0003DMT400073682	Potato	cytosol	57.77	63.28
PGSC0003DMT400014547	Potato	extracellular	62.13	61.96
Solyc03g120040.2.1	Tomato	extracellular, nucleus	43.05	61.24
VIT_09s0002g05930.t01	Wine grape	endoplasmic reticulum, extracellular	67.57	61.23
Os02t0527500-00	Rice	plastid	21.8	61.07
Solyc12g042930.1.1	Tomato	endoplasmic reticulum, golgi	62.4	60.26
KRH44408	Soybean	golgi	62.94	52.86
GSMUA_Achr9P25300_001	Banana	extracellular, vacuole	50.95	51.52
CDX80516	Canola	plastid	42.51	50.98
GSMUA_Achr4P15090_001	Banana	cytosol, endoplasmic reticulum, peroxisome	46.05	44.59
Zm00001d015715_P001	Maize	plasma membrane	69.75	43.69
GSMUA_Achr6P29630_001	Banana	cytosol, plastid	37.33	43.35
GSMUA_Achr3P31400_001	Banana	plasma membrane	48.23	39.51
GSMUA_Achr6P12280_001	Banana	cytosol, peroxisome, plasma membrane	15.26	26.79

Protein Annotations

EnsemblPlants:GSMUA_Achr2P17020_001	EnsemblPlants:GSMUA_Achr2T17020_001	EnsemblPlantsGene:GSMUA_Achr2G17020_001	Gene3D:2.60.120.260	InterPro:DUF642	InterPro:Galactose-bd-like_sf
InterPro:IPR008979	PANTHER:PTHR31265	PANTHER:PTHR31265:SF3	PFAM:PF04862	SignalP:SignalP-noTM	SUPFAM:SSF49785
UniParc:UPI0002966B0C	UniProt:M0S8P3	MapMan:35.2	:	:	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr2G17020_001]

Coordinates

chr2:+:17710296..17712027

Molecular Weight (calculated)

40114.0 Da

IEP (calculated)

8.185

GRAVY (calculated)

-0.147

Length

367 amino acids

Sequence
(BLAST)

001: MLRLLASSLF LCVASQLAAA FTDGLLPNGN FELGPKPKEM KGTQVIGRNA IPQWQITGFV EYIQWGQKQG DMLLVVPEGS YAVRLGNDAS IKQKVKLSKG
101: MRYSLTFSAA RTCAQEERLN VSASPESGVL PMQTMYSSNG WDSYAWAWLA KSDEVEVVIH NPSVSEDPAC GPLIDSVAIK QLIPPRRTNT NVLKNGGFEE
201: GPYILPNTTW GVVIPPHIED DHSPLPGWMV ESLKAVRYLD ADDFSVPRGR RAVELLAGKE SAIAQVVRTV PGRRYALAFA VGDAGNACEG SLQVEAFAGE
301: HTMMVPYESK GKGGWKRAVL RFTATAARTR VVFWSSNYNT RSDDLSSLCG PVLDDVSLVS VRYRKLA

Best Arabidopsis Sequence Match ( AT5G11420.1 )
(BLAST)

001: MKGGSLSFLF VLLIATITSV ICFSDGMLPN GDFELGPKPS DMKGTQVINK KAIPSWELSG FVEYIKSGQK QGDMLLVVPA GKFAIRLGNE ASIKQRLNVT
101: KGMYYSLTFS AARTCAQDER LNISVAPDSG VIPIQTVYSS SGWDLYAWAF QAESNVAEIV IHNPGEEEDP ACGPLIDGVA IKALYPPRPT NKNILKNGGF
201: EEGPYVLPNA TTGVLVPPFI EDDHSPLPAW MVESLKAIKY VDVEHFSVPQ GRRAVELVAG KESAIAQVAR TVVGKTYVLS FAVGDANNAC QGSMVVEAFA
301: GKDTLKVPYE SRGKGGFKRA SLRFVAVSTR TRVMFYSTFY SMRSDDFSSL CGPVIDDVKL LSARKP

Arabidopsis Description

Uncharacterized protein At5g11420 [Source:UniProtKB/TrEMBL;Acc:Q9LYE7]
SUBAcon: [extracellular,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.