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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, extracellular, vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 4
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, golgi, vacuole
Any Predictor:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G177500.1 Wheat extracellular 98.24 89.3
TraesCS6B01G207200.1 Wheat extracellular 97.65 88.77
HORVU6Hr1G037000.1 Barley extracellular 97.06 88.24
KXG29757 Sorghum golgi 85.29 77.96
Os02t0205200-01 Rice mitochondrion, nucleus, plastid 82.35 76.71
GSMUA_Achr7P08400_001 Banana endoplasmic reticulum, extracellular, vacuole 72.35 67.03
GSMUA_Achr2P17020_001 Banana endoplasmic reticulum, vacuole 68.82 63.76
VIT_04s0008g05010.t01 Wine grape extracellular, golgi 65.29 60.33
CDX68849 Canola golgi 61.76 57.53
Bra011349.1-P Field mustard golgi 61.47 57.26
CDX75247 Canola golgi 61.47 57.26
AT4G32460.1 Thale cress endoplasmic reticulum, golgi 61.47 57.26
Bra023324.1-P Field mustard cytoskeleton, cytosol, peroxisome 57.06 57.06
KRH05109 Soybean nucleus 61.18 56.83
KRH16010 Soybean nucleus 60.88 56.56
PGSC0003DMT400074806 Potato extracellular 61.47 56.33
Solyc08g067030.2.1 Tomato extracellular 61.18 56.06
CDY54909 Canola cytoskeleton, cytosol, peroxisome 55.59 55.75
AT5G11420.1 Thale cress extracellular, golgi, vacuole 59.41 55.19
CDX97108 Canola golgi 59.12 54.92
KRH52489 Soybean extracellular, golgi 59.71 54.86
TraesCS7D01G442500.1 Wheat golgi 59.71 54.86
CDX91217 Canola extracellular 58.82 54.64
CDX85713 Canola extracellular 58.53 54.37
CDY19801 Canola extracellular 58.82 54.05
CDX80511 Canola extracellular 58.24 53.95
Bra009841.1-P Field mustard extracellular 58.24 53.95
CDX88180 Canola extracellular 58.24 53.95
AT5G25460.1 Thale cress endoplasmic reticulum, extracellular 58.53 53.93
KRH52488 Soybean extracellular 57.65 53.7
CDY05493 Canola extracellular 57.65 53.55
Bra020500.1-P Field mustard extracellular 57.65 53.55
Solyc06g067910.2.1 Tomato nucleus 58.53 53.49
PGSC0003DMT400073388 Potato mitochondrion 58.24 53.37
PGSC0003DMT400014547 Potato extracellular 57.35 52.99
KRH23537 Soybean nucleus 57.35 52.14
KRH09784 Soybean nucleus 56.76 51.6
PGSC0003DMT400073682 Potato cytosol 50.59 51.34
VIT_09s0002g05930.t01 Wine grape endoplasmic reticulum, extracellular 60.88 51.11
Solyc12g042930.1.1 Tomato endoplasmic reticulum, golgi 56.47 50.53
Solyc03g120040.2.1 Tomato extracellular, nucleus 38.24 50.39
TraesCS2D01G432500.1 Wheat extracellular, golgi 54.71 49.87
TraesCS2D01G349800.1 Wheat mitochondrion 54.41 49.07
CDX80516 Canola plastid 43.53 48.37
Zm00001d015715_P001 Maize plasma membrane 82.06 47.61
TraesCS2D01G349700.1 Wheat endoplasmic reticulum, golgi, mitochondrion 52.65 47.23
TraesCS2D01G349900.1 Wheat extracellular 50.59 47.12
TraesCS5D01G395400.1 Wheat extracellular 52.35 47.09
Os02t0527500-00 Rice plastid 17.94 46.56
TraesCS2D01G349500.1 Wheat extracellular 50.0 45.09
KRH44408 Soybean golgi 56.76 44.16
TraesCS2D01G349200.1 Wheat endoplasmic reticulum, extracellular, vacuole 48.53 43.54
TraesCS5D01G469800.1 Wheat extracellular, vacuole 46.76 40.05
TraesCS3D01G294100.1 Wheat plasma membrane 42.35 36.55
Protein Annotations
EnsemblPlants:TraesCS6D01G166800.1EnsemblPlantsGene:TraesCS6D01G166800Gene3D:2.60.120.260InterPro:DUF642InterPro:Galactose-bd-like_sfInterPro:IPR008979
PANTHER:PTHR31265PANTHER:PTHR31265:SF3PFAM:PF04862SEG:segSignalP:SignalP-noTMTMHMM:TMhelix
MapMan:35.2:::::
Description
No Description!
Coordinates
chr6D:+:148797176..148798780
Molecular Weight (calculated)
36609.8 Da
IEP (calculated)
9.361
GRAVY (calculated)
-0.132
Length
340 amino acids
Sequence
(BLAST)
001: MARSAMSGLV LLLLCATCRL ALGITDGLLA NGNFERGPQP SQLRGTQVVG ASSIPSWRTS GFVEYIPSGR KQGDMVLVVP EARGRAERLN VSASGQSGVL
101: VMQTMYSSNG WDSYSWAWDA TADEVEVVVH NPGVTEDPAC GPLIDSVAIK TLTPPRRTNK NLVKNGDFEE GPYIIPGTKW GVLIPSRMVD EHSPLPGWMV
201: ESLKAVKYID SDHFAVPRGR RAVELLAGRE SAIAQVIRTV PGRQYALSFS VGNASNTCRG SLMVEAYAGR ESTKVPYESA GQGGAAKRAV LPFRATSSRT
301: RVVFFSSFYN TRTDDMSSLC GPVIDDVAVV SVRARPPKRA
Best Arabidopsis Sequence Match ( AT4G32460.1 )
(BLAST)
001: MKEMGVIVLL LLHSFFYVAF CFNDGLLPNG DFELGPRHSD MKGTQVINIT AIPNWELSGF VEYIPSGHKQ GDMILVVPKG AFAVRLGNEA SIKQKISVKK
101: GSYYSITFSA ARTCAQDERL NVSVAPHHAV MPIQTVYSSS GWDLYSWAFK AQSDYADIVI HNPGVEEDPA CGPLIDGVAM RALFPPRPTN KNILKNGGFE
201: EGPWVLPNIS SGVLIPPNSI DDHSPLPGWM VESLKAVKYI DSDHFSVPQG RRAVELVAGK ESAVAQVVRT IPGKTYVLSF SVGDASNACA GSMIVEAFAG
301: KDTIKVPYES KGKGGFKRSS LRFVAVSSRT RVMFYSTFYA MRNDDFSSLC GPVIDDVKLL SARRP
Arabidopsis Description
At4g32460 [Source:UniProtKB/TrEMBL;Acc:Q8LAR0]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.