Factsheet for TraesCS5D01G469800.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

plastid 2
extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G109880.2	Barley	golgi, vacuole	96.73	92.09
TraesCS5A01G458700.1	Wheat	extracellular, golgi	97.73	89.81
Os03t0807700-01	Rice	plastid	88.41	89.31
EER93244	Sorghum	extracellular, vacuole	86.4	88.86
Zm00001d034547_P002	Maize	extracellular, vacuole	84.89	81.4
GSMUA_Achr9P25300_001	Banana	extracellular, vacuole	62.47	68.32
VIT_13s0064g00460.t01	Wine grape	extracellular	56.17	61.94
PGSC0003DMT400017671	Potato	extracellular	56.68	61.31
VIT_08s0007g08460.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	56.17	60.76
Solyc01g087540.2.1	Tomato	extracellular	55.92	60.49
CDX79913	Canola	cytosol	32.24	60.09
KRH13974	Soybean	nucleus	55.16	59.67
KRH32968	Soybean	endoplasmic reticulum	54.91	59.4
CDY28002	Canola	extracellular	53.65	58.36
CDY35979	Canola	extracellular	53.4	58.08
Bra029693.1-P	Field mustard	extracellular	53.4	58.08
CDY22149	Canola	extracellular	53.15	57.81
Bra040046.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	53.15	57.81
KRH23881	Soybean	extracellular	51.39	57.79
CDY48764	Canola	cytosol	29.22	57.71
AT3G08030.1	Thale cress	extracellular	52.9	57.53
Bra004651.1-P	Field mustard	extracellular	51.89	55.68
Os07t0206900-01	Rice	cytosol, peroxisome	13.6	55.1
AT2G41810.1	Thale cress	extracellular, vacuole	51.13	54.86
KRH39918	Soybean	endoplasmic reticulum, extracellular, golgi	53.65	54.62
CDY14785	Canola	extracellular, vacuole	50.88	54.59
AT2G41800.1	Thale cress	extracellular, vacuole	50.63	54.32
Bra016917.1-P	Field mustard	extracellular	51.13	54.28
Bra004650.1-P	Field mustard	extracellular	50.63	54.18
CDY06908	Canola	extracellular	50.63	53.74
GSMUA_Achr6P29630_001	Banana	cytosol, plastid	42.07	52.85
Solyc04g015620.2.1	Tomato	plastid	47.1	50.54
Solyc04g015610.2.1	Tomato	extracellular	46.6	50.14
TraesCS7D01G442500.1	Wheat	golgi	45.09	48.38
PGSC0003DMT400081713	Potato	endoplasmic reticulum, extracellular, plasma membrane	24.18	46.83
TraesCS6D01G166800.1	Wheat	extracellular, golgi, vacuole	40.05	46.76
CDX79912	Canola	extracellular, vacuole	51.64	45.56
CDY48765	Canola	extracellular	50.63	45.37
TraesCS2D01G349800.1	Wheat	mitochondrion	42.32	44.56
TraesCS2D01G349900.1	Wheat	extracellular	39.8	43.29
TraesCS2D01G349700.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	40.3	42.22
TraesCS2D01G432500.1	Wheat	extracellular, golgi	39.55	42.09
TraesCS2D01G349500.1	Wheat	extracellular	39.8	41.91
TraesCS5D01G395400.1	Wheat	extracellular	39.55	41.53
TraesCS3D01G294100.1	Wheat	plasma membrane	39.29	39.59
TraesCS2D01G349200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	37.28	39.05

Protein Annotations

EnsemblPlants:TraesCS5D01G469800.1	EnsemblPlantsGene:TraesCS5D01G469800	Gene3D:2.60.120.260	InterPro:DUF642	InterPro:Galactose-bd-like_sf	InterPro:IPR008979
PANTHER:PTHR31265	PANTHER:PTHR31265:SF2	PFAM:PF04862	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF49785
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr5D:+:510833815..510835581

Molecular Weight (calculated)

41665.9 Da

IEP (calculated)

9.249

GRAVY (calculated)

0.105

Length

397 amino acids

Sequence
(BLAST)

001: MELPWGALLL ALLSVSSSSA VATLAVTAPP PAPARAPAPV TAPAPAHAPP QAQEAEGLLI NGNFETAPRK VNKTLIVGRH SLPGWTLRGH VEYVSAGPQP
101: GGMFFAVPHG VHALRLGSHA SASQNVSVRP GSLYALTFAA TRTCAQDEAL RIAVSPSLSA PADVAVRTLY SADTADTWAW GFRASSPVAQ VTFSNPGVQE
201: DAACGPLIDA VAIKELPTPY PTKDNLIKND GFEIGPQVFK NSSVGVLLPP KQKDVTSPLP GWIIESLKAV RYIDAAHFSV PAGQYAVELV AGRESAIAQV
301: IRTVPNRAYN LSYVVGDAKN GCHGSMLVEA FAANVTQKVP FESTGKGGFK AASLRFVAAG VRTRVTFYSS YYHTKVTDGV SLCGPVLDQV KIVPMKL

Best Arabidopsis Sequence Match ( AT3G08030.1 )
(BLAST)

001: MAVPKAIILP ILLLICGAAL GAPASEGYLR NGNFEESPKK TDMKKTVLLG KNALPEWETT GFVEYIAGGP QPGGMYFPVA HGVHAVRLGN EATISQKLEV
101: KPGSLYALTF GASRTCAQDE VLRVSVPSQS GDLPLQTLYN SFGGDVYAWA FVAKTSQVTV TFHNPGVQED PACGPLLDAV AIKELVHPIY TRGNLVKNGG
201: FEEGPHRLVN STQGVLLPPK QEDLTSPLPG WIIESLKAVK FIDSKYFNVP FGHAAIELVA GKESAIAQVI RTSPGQTYTL SFVVGDAKND CHGSMMVEAF
301: AARDTLKVPH TSVGGGHVKT ASFKFKAVEA RTRITFFSGF YHTKKTDTVS LCGPVIDEIV VSHVA

Arabidopsis Description

F17A17.37 protein [Source:UniProtKB/TrEMBL;Acc:Q9SFB1]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.